FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE3987, 326 aa 1>>>pF1KE3987 326 - 326 aa - 326 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.2361+/-0.000355; mu= 17.0810+/- 0.022 mean_var=83.5997+/-17.309, 0's: 0 Z-trim(115.2): 135 B-trim: 545 in 1/51 Lambda= 0.140272 statistics sampled from 25271 (25448) to 25271 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.676), E-opt: 0.2 (0.298), width: 16 Scan time: 8.370 The best scores are: opt bits E(85289) NP_060173 (OMIM: 609079) F-box/LRR-repeat protein ( 326) 2209 456.7 3e-128 XP_006722845 (OMIM: 609079) PREDICTED: F-box/LRR-r ( 284) 1846 383.2 3.5e-106 NP_001303867 (OMIM: 609079) F-box/LRR-repeat prote ( 273) 1841 382.2 6.8e-106 NP_001303869 (OMIM: 609079) F-box/LRR-repeat prote ( 273) 1841 382.2 6.8e-106 NP_001303866 (OMIM: 609079) F-box/LRR-repeat prote ( 273) 1841 382.2 6.8e-106 NP_001303868 (OMIM: 609079) F-box/LRR-repeat prote ( 273) 1841 382.2 6.8e-106 NP_001303871 (OMIM: 609079) F-box/LRR-repeat prote ( 273) 1841 382.2 6.8e-106 NP_001303870 (OMIM: 609079) F-box/LRR-repeat prote ( 273) 1841 382.2 6.8e-106 NP_001303865 (OMIM: 609079) F-box/LRR-repeat prote ( 293) 1841 382.2 7.2e-106 XP_016882401 (OMIM: 609079) PREDICTED: F-box/LRR-r ( 343) 1841 382.3 8e-106 XP_011512300 (OMIM: 605656) PREDICTED: F-box/LRR-r ( 444) 225 55.3 2.7e-07 NP_001265246 (OMIM: 605656) F-box/LRR-repeat prote ( 444) 225 55.3 2.7e-07 XP_016864751 (OMIM: 605656) PREDICTED: F-box/LRR-r ( 486) 225 55.4 2.9e-07 NP_036436 (OMIM: 605656) F-box/LRR-repeat protein ( 491) 225 55.4 2.9e-07 NP_116264 (OMIM: 609086) F-box/LRR-repeat protein ( 436) 212 52.7 1.7e-06 XP_005257803 (OMIM: 609086) PREDICTED: F-box/LRR-r ( 473) 212 52.7 1.8e-06 XP_011541876 (OMIM: 609083) PREDICTED: F-box/LRR-r ( 621) 187 47.8 7.2e-05 XP_011541880 (OMIM: 609083) PREDICTED: F-box/LRR-r ( 582) 185 47.3 9e-05 XP_011541879 (OMIM: 609083) PREDICTED: F-box/LRR-r ( 589) 185 47.4 9.1e-05 XP_011541878 (OMIM: 609083) PREDICTED: F-box/LRR-r ( 610) 185 47.4 9.4e-05 XP_011541877 (OMIM: 609083) PREDICTED: F-box/LRR-r ( 618) 185 47.4 9.4e-05 NP_001156787 (OMIM: 609083) F-box/LRR-repeat prote ( 701) 185 47.4 0.0001 XP_005272105 (OMIM: 609083) PREDICTED: F-box/LRR-r ( 712) 185 47.4 0.0001 NP_036289 (OMIM: 605652) F-box/LRR-repeat protein ( 423) 180 46.2 0.00014 XP_005265071 (OMIM: 605652) PREDICTED: F-box/LRR-r ( 454) 180 46.2 0.00015 XP_016865218 (OMIM: 609083) PREDICTED: F-box/LRR-r ( 567) 179 46.1 0.00021 XP_005272107 (OMIM: 609083) PREDICTED: F-box/LRR-r ( 505) 171 44.5 0.00058 XP_011541882 (OMIM: 609083) PREDICTED: F-box/LRR-r ( 513) 171 44.5 0.00059 XP_011541881 (OMIM: 609083) PREDICTED: F-box/LRR-r ( 513) 171 44.5 0.00059 XP_016874365 (OMIM: 609081) PREDICTED: F-box/LRR-r ( 387) 167 43.5 0.00084 XP_016874364 (OMIM: 609081) PREDICTED: F-box/LRR-r ( 404) 167 43.6 0.00086 NP_689654 (OMIM: 609081) F-box/LRR-repeat protein ( 418) 167 43.6 0.00089 NP_001165184 (OMIM: 605652) F-box/LRR-repeat prote ( 355) 164 42.9 0.0012 XP_011512384 (OMIM: 601436) PREDICTED: S-phase kin ( 358) 163 42.7 0.0014 XP_011512383 (OMIM: 601436) PREDICTED: S-phase kin ( 379) 163 42.7 0.0014 NP_116026 (OMIM: 601436) S-phase kinase-associated ( 410) 163 42.8 0.0015 NP_005974 (OMIM: 601436) S-phase kinase-associated ( 424) 163 42.8 0.0016 XP_011514234 (OMIM: 609080) PREDICTED: F-box/LRR-r ( 639) 153 40.9 0.0086 NP_001104508 (OMIM: 609080) F-box/LRR-repeat prote ( 690) 153 40.9 0.0091 NP_001274079 (OMIM: 609080) F-box/LRR-repeat prote ( 707) 153 40.9 0.0093 XP_016867342 (OMIM: 609080) PREDICTED: F-box/LRR-r ( 735) 153 41.0 0.0096 XP_005250266 (OMIM: 609080) PREDICTED: F-box/LRR-r ( 735) 153 41.0 0.0096 XP_011514232 (OMIM: 609080) PREDICTED: F-box/LRR-r ( 735) 153 41.0 0.0096 NP_659469 (OMIM: 609080) F-box/LRR-repeat protein ( 735) 153 41.0 0.0096 XP_005250265 (OMIM: 609080) PREDICTED: F-box/LRR-r ( 780) 153 41.0 0.01 XP_016867341 (OMIM: 609080) PREDICTED: F-box/LRR-r ( 780) 153 41.0 0.01 >>NP_060173 (OMIM: 609079) F-box/LRR-repeat protein 12 i (326 aa) initn: 2209 init1: 2209 opt: 2209 Z-score: 2423.6 bits: 456.7 E(85289): 3e-128 Smith-Waterman score: 2209; 100.0% identity (100.0% similar) in 326 aa overlap (1-326:1-326) 10 20 30 40 50 60 pF1KE3 MATLVELPDSVLLEIFSYLPVRDRIRISRVCHRWKRLVDDRWLWRHVDLTLYTMRPKVMW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_060 MATLVELPDSVLLEIFSYLPVRDRIRISRVCHRWKRLVDDRWLWRHVDLTLYTMRPKVMW 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 HLLRRYMASRLHSLRMGGYLFSGSQAPQLSPALLRALGQKCPNLKRLCLHVADLSMVPIT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_060 HLLRRYMASRLHSLRMGGYLFSGSQAPQLSPALLRALGQKCPNLKRLCLHVADLSMVPIT 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 SLPSTLRTLELHSCEISMAWLHKQQDPTVLPLLECIVLDRVPAFRDEHLQGLTRFRALRS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_060 SLPSTLRTLELHSCEISMAWLHKQQDPTVLPLLECIVLDRVPAFRDEHLQGLTRFRALRS 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 LVLGGTYRVTETGLDAGLQELSYLQRLEVLGCTLSADSTLLAISRHLRDVRKIRLTVRGL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_060 LVLGGTYRVTETGLDAGLQELSYLQRLEVLGCTLSADSTLLAISRHLRDVRKIRLTVRGL 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE3 SAPGLAVLEGMPALESLCLQGPLVTPEMPSPTEILSSCLTMPKLRVLELQGLGWEGQEAE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_060 SAPGLAVLEGMPALESLCLQGPLVTPEMPSPTEILSSCLTMPKLRVLELQGLGWEGQEAE 250 260 270 280 290 300 310 320 pF1KE3 KILCKGLPHCMVIVRACPKESMDWWM :::::::::::::::::::::::::: NP_060 KILCKGLPHCMVIVRACPKESMDWWM 310 320 >>XP_006722845 (OMIM: 609079) PREDICTED: F-box/LRR-repea (284 aa) initn: 1846 init1: 1846 opt: 1846 Z-score: 2027.4 bits: 383.2 E(85289): 3.5e-106 Smith-Waterman score: 1846; 100.0% identity (100.0% similar) in 274 aa overlap (53-326:11-284) 30 40 50 60 70 80 pF1KE3 DRIRISRVCHRWKRLVDDRWLWRHVDLTLYTMRPKVMWHLLRRYMASRLHSLRMGGYLFS :::::::::::::::::::::::::::::: XP_006 MILRPPQPCGTMRPKVMWHLLRRYMASRLHSLRMGGYLFS 10 20 30 40 90 100 110 120 130 140 pF1KE3 GSQAPQLSPALLRALGQKCPNLKRLCLHVADLSMVPITSLPSTLRTLELHSCEISMAWLH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 GSQAPQLSPALLRALGQKCPNLKRLCLHVADLSMVPITSLPSTLRTLELHSCEISMAWLH 50 60 70 80 90 100 150 160 170 180 190 200 pF1KE3 KQQDPTVLPLLECIVLDRVPAFRDEHLQGLTRFRALRSLVLGGTYRVTETGLDAGLQELS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 KQQDPTVLPLLECIVLDRVPAFRDEHLQGLTRFRALRSLVLGGTYRVTETGLDAGLQELS 110 120 130 140 150 160 210 220 230 240 250 260 pF1KE3 YLQRLEVLGCTLSADSTLLAISRHLRDVRKIRLTVRGLSAPGLAVLEGMPALESLCLQGP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 YLQRLEVLGCTLSADSTLLAISRHLRDVRKIRLTVRGLSAPGLAVLEGMPALESLCLQGP 170 180 190 200 210 220 270 280 290 300 310 320 pF1KE3 LVTPEMPSPTEILSSCLTMPKLRVLELQGLGWEGQEAEKILCKGLPHCMVIVRACPKESM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 LVTPEMPSPTEILSSCLTMPKLRVLELQGLGWEGQEAEKILCKGLPHCMVIVRACPKESM 230 240 250 260 270 280 pF1KE3 DWWM :::: XP_006 DWWM >>NP_001303867 (OMIM: 609079) F-box/LRR-repeat protein 1 (273 aa) initn: 1841 init1: 1841 opt: 1841 Z-score: 2022.1 bits: 382.2 E(85289): 6.8e-106 Smith-Waterman score: 1841; 100.0% identity (100.0% similar) in 273 aa overlap (54-326:1-273) 30 40 50 60 70 80 pF1KE3 RIRISRVCHRWKRLVDDRWLWRHVDLTLYTMRPKVMWHLLRRYMASRLHSLRMGGYLFSG :::::::::::::::::::::::::::::: NP_001 MRPKVMWHLLRRYMASRLHSLRMGGYLFSG 10 20 30 90 100 110 120 130 140 pF1KE3 SQAPQLSPALLRALGQKCPNLKRLCLHVADLSMVPITSLPSTLRTLELHSCEISMAWLHK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 SQAPQLSPALLRALGQKCPNLKRLCLHVADLSMVPITSLPSTLRTLELHSCEISMAWLHK 40 50 60 70 80 90 150 160 170 180 190 200 pF1KE3 QQDPTVLPLLECIVLDRVPAFRDEHLQGLTRFRALRSLVLGGTYRVTETGLDAGLQELSY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 QQDPTVLPLLECIVLDRVPAFRDEHLQGLTRFRALRSLVLGGTYRVTETGLDAGLQELSY 100 110 120 130 140 150 210 220 230 240 250 260 pF1KE3 LQRLEVLGCTLSADSTLLAISRHLRDVRKIRLTVRGLSAPGLAVLEGMPALESLCLQGPL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 LQRLEVLGCTLSADSTLLAISRHLRDVRKIRLTVRGLSAPGLAVLEGMPALESLCLQGPL 160 170 180 190 200 210 270 280 290 300 310 320 pF1KE3 VTPEMPSPTEILSSCLTMPKLRVLELQGLGWEGQEAEKILCKGLPHCMVIVRACPKESMD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 VTPEMPSPTEILSSCLTMPKLRVLELQGLGWEGQEAEKILCKGLPHCMVIVRACPKESMD 220 230 240 250 260 270 pF1KE3 WWM ::: NP_001 WWM >>NP_001303869 (OMIM: 609079) F-box/LRR-repeat protein 1 (273 aa) initn: 1841 init1: 1841 opt: 1841 Z-score: 2022.1 bits: 382.2 E(85289): 6.8e-106 Smith-Waterman score: 1841; 100.0% identity (100.0% similar) in 273 aa overlap (54-326:1-273) 30 40 50 60 70 80 pF1KE3 RIRISRVCHRWKRLVDDRWLWRHVDLTLYTMRPKVMWHLLRRYMASRLHSLRMGGYLFSG :::::::::::::::::::::::::::::: NP_001 MRPKVMWHLLRRYMASRLHSLRMGGYLFSG 10 20 30 90 100 110 120 130 140 pF1KE3 SQAPQLSPALLRALGQKCPNLKRLCLHVADLSMVPITSLPSTLRTLELHSCEISMAWLHK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 SQAPQLSPALLRALGQKCPNLKRLCLHVADLSMVPITSLPSTLRTLELHSCEISMAWLHK 40 50 60 70 80 90 150 160 170 180 190 200 pF1KE3 QQDPTVLPLLECIVLDRVPAFRDEHLQGLTRFRALRSLVLGGTYRVTETGLDAGLQELSY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 QQDPTVLPLLECIVLDRVPAFRDEHLQGLTRFRALRSLVLGGTYRVTETGLDAGLQELSY 100 110 120 130 140 150 210 220 230 240 250 260 pF1KE3 LQRLEVLGCTLSADSTLLAISRHLRDVRKIRLTVRGLSAPGLAVLEGMPALESLCLQGPL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 LQRLEVLGCTLSADSTLLAISRHLRDVRKIRLTVRGLSAPGLAVLEGMPALESLCLQGPL 160 170 180 190 200 210 270 280 290 300 310 320 pF1KE3 VTPEMPSPTEILSSCLTMPKLRVLELQGLGWEGQEAEKILCKGLPHCMVIVRACPKESMD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 VTPEMPSPTEILSSCLTMPKLRVLELQGLGWEGQEAEKILCKGLPHCMVIVRACPKESMD 220 230 240 250 260 270 pF1KE3 WWM ::: NP_001 WWM >>NP_001303866 (OMIM: 609079) F-box/LRR-repeat protein 1 (273 aa) initn: 1841 init1: 1841 opt: 1841 Z-score: 2022.1 bits: 382.2 E(85289): 6.8e-106 Smith-Waterman score: 1841; 100.0% identity (100.0% similar) in 273 aa overlap (54-326:1-273) 30 40 50 60 70 80 pF1KE3 RIRISRVCHRWKRLVDDRWLWRHVDLTLYTMRPKVMWHLLRRYMASRLHSLRMGGYLFSG :::::::::::::::::::::::::::::: NP_001 MRPKVMWHLLRRYMASRLHSLRMGGYLFSG 10 20 30 90 100 110 120 130 140 pF1KE3 SQAPQLSPALLRALGQKCPNLKRLCLHVADLSMVPITSLPSTLRTLELHSCEISMAWLHK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 SQAPQLSPALLRALGQKCPNLKRLCLHVADLSMVPITSLPSTLRTLELHSCEISMAWLHK 40 50 60 70 80 90 150 160 170 180 190 200 pF1KE3 QQDPTVLPLLECIVLDRVPAFRDEHLQGLTRFRALRSLVLGGTYRVTETGLDAGLQELSY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 QQDPTVLPLLECIVLDRVPAFRDEHLQGLTRFRALRSLVLGGTYRVTETGLDAGLQELSY 100 110 120 130 140 150 210 220 230 240 250 260 pF1KE3 LQRLEVLGCTLSADSTLLAISRHLRDVRKIRLTVRGLSAPGLAVLEGMPALESLCLQGPL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 LQRLEVLGCTLSADSTLLAISRHLRDVRKIRLTVRGLSAPGLAVLEGMPALESLCLQGPL 160 170 180 190 200 210 270 280 290 300 310 320 pF1KE3 VTPEMPSPTEILSSCLTMPKLRVLELQGLGWEGQEAEKILCKGLPHCMVIVRACPKESMD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 VTPEMPSPTEILSSCLTMPKLRVLELQGLGWEGQEAEKILCKGLPHCMVIVRACPKESMD 220 230 240 250 260 270 pF1KE3 WWM ::: NP_001 WWM >>NP_001303868 (OMIM: 609079) F-box/LRR-repeat protein 1 (273 aa) initn: 1841 init1: 1841 opt: 1841 Z-score: 2022.1 bits: 382.2 E(85289): 6.8e-106 Smith-Waterman score: 1841; 100.0% identity (100.0% similar) in 273 aa overlap (54-326:1-273) 30 40 50 60 70 80 pF1KE3 RIRISRVCHRWKRLVDDRWLWRHVDLTLYTMRPKVMWHLLRRYMASRLHSLRMGGYLFSG :::::::::::::::::::::::::::::: NP_001 MRPKVMWHLLRRYMASRLHSLRMGGYLFSG 10 20 30 90 100 110 120 130 140 pF1KE3 SQAPQLSPALLRALGQKCPNLKRLCLHVADLSMVPITSLPSTLRTLELHSCEISMAWLHK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 SQAPQLSPALLRALGQKCPNLKRLCLHVADLSMVPITSLPSTLRTLELHSCEISMAWLHK 40 50 60 70 80 90 150 160 170 180 190 200 pF1KE3 QQDPTVLPLLECIVLDRVPAFRDEHLQGLTRFRALRSLVLGGTYRVTETGLDAGLQELSY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 QQDPTVLPLLECIVLDRVPAFRDEHLQGLTRFRALRSLVLGGTYRVTETGLDAGLQELSY 100 110 120 130 140 150 210 220 230 240 250 260 pF1KE3 LQRLEVLGCTLSADSTLLAISRHLRDVRKIRLTVRGLSAPGLAVLEGMPALESLCLQGPL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 LQRLEVLGCTLSADSTLLAISRHLRDVRKIRLTVRGLSAPGLAVLEGMPALESLCLQGPL 160 170 180 190 200 210 270 280 290 300 310 320 pF1KE3 VTPEMPSPTEILSSCLTMPKLRVLELQGLGWEGQEAEKILCKGLPHCMVIVRACPKESMD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 VTPEMPSPTEILSSCLTMPKLRVLELQGLGWEGQEAEKILCKGLPHCMVIVRACPKESMD 220 230 240 250 260 270 pF1KE3 WWM ::: NP_001 WWM >>NP_001303871 (OMIM: 609079) F-box/LRR-repeat protein 1 (273 aa) initn: 1841 init1: 1841 opt: 1841 Z-score: 2022.1 bits: 382.2 E(85289): 6.8e-106 Smith-Waterman score: 1841; 100.0% identity (100.0% similar) in 273 aa overlap (54-326:1-273) 30 40 50 60 70 80 pF1KE3 RIRISRVCHRWKRLVDDRWLWRHVDLTLYTMRPKVMWHLLRRYMASRLHSLRMGGYLFSG :::::::::::::::::::::::::::::: NP_001 MRPKVMWHLLRRYMASRLHSLRMGGYLFSG 10 20 30 90 100 110 120 130 140 pF1KE3 SQAPQLSPALLRALGQKCPNLKRLCLHVADLSMVPITSLPSTLRTLELHSCEISMAWLHK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 SQAPQLSPALLRALGQKCPNLKRLCLHVADLSMVPITSLPSTLRTLELHSCEISMAWLHK 40 50 60 70 80 90 150 160 170 180 190 200 pF1KE3 QQDPTVLPLLECIVLDRVPAFRDEHLQGLTRFRALRSLVLGGTYRVTETGLDAGLQELSY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 QQDPTVLPLLECIVLDRVPAFRDEHLQGLTRFRALRSLVLGGTYRVTETGLDAGLQELSY 100 110 120 130 140 150 210 220 230 240 250 260 pF1KE3 LQRLEVLGCTLSADSTLLAISRHLRDVRKIRLTVRGLSAPGLAVLEGMPALESLCLQGPL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 LQRLEVLGCTLSADSTLLAISRHLRDVRKIRLTVRGLSAPGLAVLEGMPALESLCLQGPL 160 170 180 190 200 210 270 280 290 300 310 320 pF1KE3 VTPEMPSPTEILSSCLTMPKLRVLELQGLGWEGQEAEKILCKGLPHCMVIVRACPKESMD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 VTPEMPSPTEILSSCLTMPKLRVLELQGLGWEGQEAEKILCKGLPHCMVIVRACPKESMD 220 230 240 250 260 270 pF1KE3 WWM ::: NP_001 WWM >>NP_001303870 (OMIM: 609079) F-box/LRR-repeat protein 1 (273 aa) initn: 1841 init1: 1841 opt: 1841 Z-score: 2022.1 bits: 382.2 E(85289): 6.8e-106 Smith-Waterman score: 1841; 100.0% identity (100.0% similar) in 273 aa overlap (54-326:1-273) 30 40 50 60 70 80 pF1KE3 RIRISRVCHRWKRLVDDRWLWRHVDLTLYTMRPKVMWHLLRRYMASRLHSLRMGGYLFSG :::::::::::::::::::::::::::::: NP_001 MRPKVMWHLLRRYMASRLHSLRMGGYLFSG 10 20 30 90 100 110 120 130 140 pF1KE3 SQAPQLSPALLRALGQKCPNLKRLCLHVADLSMVPITSLPSTLRTLELHSCEISMAWLHK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 SQAPQLSPALLRALGQKCPNLKRLCLHVADLSMVPITSLPSTLRTLELHSCEISMAWLHK 40 50 60 70 80 90 150 160 170 180 190 200 pF1KE3 QQDPTVLPLLECIVLDRVPAFRDEHLQGLTRFRALRSLVLGGTYRVTETGLDAGLQELSY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 QQDPTVLPLLECIVLDRVPAFRDEHLQGLTRFRALRSLVLGGTYRVTETGLDAGLQELSY 100 110 120 130 140 150 210 220 230 240 250 260 pF1KE3 LQRLEVLGCTLSADSTLLAISRHLRDVRKIRLTVRGLSAPGLAVLEGMPALESLCLQGPL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 LQRLEVLGCTLSADSTLLAISRHLRDVRKIRLTVRGLSAPGLAVLEGMPALESLCLQGPL 160 170 180 190 200 210 270 280 290 300 310 320 pF1KE3 VTPEMPSPTEILSSCLTMPKLRVLELQGLGWEGQEAEKILCKGLPHCMVIVRACPKESMD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 VTPEMPSPTEILSSCLTMPKLRVLELQGLGWEGQEAEKILCKGLPHCMVIVRACPKESMD 220 230 240 250 260 270 pF1KE3 WWM ::: NP_001 WWM >>NP_001303865 (OMIM: 609079) F-box/LRR-repeat protein 1 (293 aa) initn: 1841 init1: 1841 opt: 1841 Z-score: 2021.7 bits: 382.2 E(85289): 7.2e-106 Smith-Waterman score: 1888; 89.9% identity (89.9% similar) in 326 aa overlap (1-326:1-293) 10 20 30 40 50 60 pF1KE3 MATLVELPDSVLLEIFSYLPVRDRIRISRVCHRWKRLVDDRWLWRHVDLTLYTMRPKVMW :::::::::::::::::::: ::::::: NP_001 MATLVELPDSVLLEIFSYLP---------------------------------MRPKVMW 10 20 70 80 90 100 110 120 pF1KE3 HLLRRYMASRLHSLRMGGYLFSGSQAPQLSPALLRALGQKCPNLKRLCLHVADLSMVPIT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 HLLRRYMASRLHSLRMGGYLFSGSQAPQLSPALLRALGQKCPNLKRLCLHVADLSMVPIT 30 40 50 60 70 80 130 140 150 160 170 180 pF1KE3 SLPSTLRTLELHSCEISMAWLHKQQDPTVLPLLECIVLDRVPAFRDEHLQGLTRFRALRS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 SLPSTLRTLELHSCEISMAWLHKQQDPTVLPLLECIVLDRVPAFRDEHLQGLTRFRALRS 90 100 110 120 130 140 190 200 210 220 230 240 pF1KE3 LVLGGTYRVTETGLDAGLQELSYLQRLEVLGCTLSADSTLLAISRHLRDVRKIRLTVRGL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 LVLGGTYRVTETGLDAGLQELSYLQRLEVLGCTLSADSTLLAISRHLRDVRKIRLTVRGL 150 160 170 180 190 200 250 260 270 280 290 300 pF1KE3 SAPGLAVLEGMPALESLCLQGPLVTPEMPSPTEILSSCLTMPKLRVLELQGLGWEGQEAE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 SAPGLAVLEGMPALESLCLQGPLVTPEMPSPTEILSSCLTMPKLRVLELQGLGWEGQEAE 210 220 230 240 250 260 310 320 pF1KE3 KILCKGLPHCMVIVRACPKESMDWWM :::::::::::::::::::::::::: NP_001 KILCKGLPHCMVIVRACPKESMDWWM 270 280 290 >>XP_016882401 (OMIM: 609079) PREDICTED: F-box/LRR-repea (343 aa) initn: 1841 init1: 1841 opt: 1841 Z-score: 2020.8 bits: 382.3 E(85289): 8e-106 Smith-Waterman score: 1841; 100.0% identity (100.0% similar) in 273 aa overlap (54-326:71-343) 30 40 50 60 70 80 pF1KE3 RIRISRVCHRWKRLVDDRWLWRHVDLTLYTMRPKVMWHLLRRYMASRLHSLRMGGYLFSG :::::::::::::::::::::::::::::: XP_016 DHGDFGRTAGLGPARDLLLPPGTGPDPHLQMRPKVMWHLLRRYMASRLHSLRMGGYLFSG 50 60 70 80 90 100 90 100 110 120 130 140 pF1KE3 SQAPQLSPALLRALGQKCPNLKRLCLHVADLSMVPITSLPSTLRTLELHSCEISMAWLHK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 SQAPQLSPALLRALGQKCPNLKRLCLHVADLSMVPITSLPSTLRTLELHSCEISMAWLHK 110 120 130 140 150 160 150 160 170 180 190 200 pF1KE3 QQDPTVLPLLECIVLDRVPAFRDEHLQGLTRFRALRSLVLGGTYRVTETGLDAGLQELSY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 QQDPTVLPLLECIVLDRVPAFRDEHLQGLTRFRALRSLVLGGTYRVTETGLDAGLQELSY 170 180 190 200 210 220 210 220 230 240 250 260 pF1KE3 LQRLEVLGCTLSADSTLLAISRHLRDVRKIRLTVRGLSAPGLAVLEGMPALESLCLQGPL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 LQRLEVLGCTLSADSTLLAISRHLRDVRKIRLTVRGLSAPGLAVLEGMPALESLCLQGPL 230 240 250 260 270 280 270 280 290 300 310 320 pF1KE3 VTPEMPSPTEILSSCLTMPKLRVLELQGLGWEGQEAEKILCKGLPHCMVIVRACPKESMD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 VTPEMPSPTEILSSCLTMPKLRVLELQGLGWEGQEAEKILCKGLPHCMVIVRACPKESMD 290 300 310 320 330 340 pF1KE3 WWM ::: XP_016 WWM 326 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 08:11:59 2016 done: Sun Nov 6 08:12:00 2016 Total Scan time: 8.370 Total Display time: 0.030 Function used was FASTA [36.3.4 Apr, 2011]