FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE5135, 108 aa 1>>>pF1KE5135 108 - 108 aa - 108 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.0923+/-0.000313; mu= 11.1927+/- 0.019 mean_var=74.1236+/-14.256, 0's: 0 Z-trim(118.3): 22 B-trim: 53 in 1/49 Lambda= 0.148969 statistics sampled from 31141 (31163) to 31141 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.747), E-opt: 0.2 (0.365), width: 16 Scan time: 4.090 The best scores are: opt bits E(85289) NP_065148 (OMIM: 125853,605565) resistin precursor ( 108) 759 171.4 2.5e-43 NP_001180303 (OMIM: 125853,605565) resistin precur ( 108) 759 171.4 2.5e-43 NP_115968 (OMIM: 605645) resistin-like beta precur ( 111) 379 89.7 1e-18 >>NP_065148 (OMIM: 125853,605565) resistin precursor [Ho (108 aa) initn: 759 init1: 759 opt: 759 Z-score: 898.7 bits: 171.4 E(85289): 2.5e-43 Smith-Waterman score: 759; 100.0% identity (100.0% similar) in 108 aa overlap (1-108:1-108) 10 20 30 40 50 60 pF1KE5 MKALCLLLLPVLGLLVSSKTLCSMEEAINERIQEVAGSLIFRAISSIGLECQSVTSRGDL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_065 MKALCLLLLPVLGLLVSSKTLCSMEEAINERIQEVAGSLIFRAISSIGLECQSVTSRGDL 10 20 30 40 50 60 70 80 90 100 pF1KE5 ATCPRGFAVTGCTCGSACGSWDVRAETTCHCQCAGMDWTGARCCRVQP :::::::::::::::::::::::::::::::::::::::::::::::: NP_065 ATCPRGFAVTGCTCGSACGSWDVRAETTCHCQCAGMDWTGARCCRVQP 70 80 90 100 >>NP_001180303 (OMIM: 125853,605565) resistin precursor (108 aa) initn: 759 init1: 759 opt: 759 Z-score: 898.7 bits: 171.4 E(85289): 2.5e-43 Smith-Waterman score: 759; 100.0% identity (100.0% similar) in 108 aa overlap (1-108:1-108) 10 20 30 40 50 60 pF1KE5 MKALCLLLLPVLGLLVSSKTLCSMEEAINERIQEVAGSLIFRAISSIGLECQSVTSRGDL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MKALCLLLLPVLGLLVSSKTLCSMEEAINERIQEVAGSLIFRAISSIGLECQSVTSRGDL 10 20 30 40 50 60 70 80 90 100 pF1KE5 ATCPRGFAVTGCTCGSACGSWDVRAETTCHCQCAGMDWTGARCCRVQP :::::::::::::::::::::::::::::::::::::::::::::::: NP_001 ATCPRGFAVTGCTCGSACGSWDVRAETTCHCQCAGMDWTGARCCRVQP 70 80 90 100 >>NP_115968 (OMIM: 605645) resistin-like beta precursor (111 aa) initn: 399 init1: 292 opt: 379 Z-score: 457.2 bits: 89.7 E(85289): 1e-18 Smith-Waterman score: 379; 49.0% identity (76.0% similar) in 104 aa overlap (4-106:7-110) 10 20 30 40 50 pF1KE5 MKALCLLLLPVLGLLVSSKTLCSMEEAINERIQEVAGSLIFRAIS-SIGLECQSVTS : :.:.:.: :. ..: ::.. .....:..: .:: . : : : :: : NP_115 MGPSSCLLLILIPLLQLINPGSTQCSLDSVMDKKIKDVLNSLEYSPSPISKKLSCASVKS 10 20 30 40 50 60 60 70 80 90 100 pF1KE5 RGDLATCPRGFAVTGCTCGSACGSWDVRAETTCHCQCAGMDWTGARCCRVQP .: ..:: :.:::::.:: .::::::. ::::::::. .::: ::::.. NP_115 QGRPSSCPAGMAVTGCACGYGCGSWDVQLETTCHCQCSVVDWTTARCCHLT 70 80 90 100 110 108 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 21:42:35 2016 done: Mon Nov 7 21:42:36 2016 Total Scan time: 4.090 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]