FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1910, 444 aa 1>>>pF1KE1910 444 - 444 aa - 444 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.3344+/-0.000382; mu= 17.6382+/- 0.024 mean_var=69.9508+/-13.575, 0's: 0 Z-trim(112.6): 66 B-trim: 103 in 1/53 Lambda= 0.153348 statistics sampled from 21462 (21530) to 21462 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.621), E-opt: 0.2 (0.252), width: 16 Scan time: 7.760 The best scores are: opt bits E(85289) NP_001276058 (OMIM: 602662) tubulin beta-4A chain ( 444) 2983 669.3 5.8e-192 NP_006078 (OMIM: 602662) tubulin beta-4A chain iso ( 444) 2983 669.3 5.8e-192 NP_001276056 (OMIM: 602662) tubulin beta-4A chain ( 489) 2983 669.3 6.2e-192 NP_001276052 (OMIM: 602662) tubulin beta-4A chain ( 495) 2983 669.3 6.3e-192 NP_006079 (OMIM: 602660) tubulin beta-4B chain [Ho ( 445) 2944 660.6 2.3e-189 NP_821133 (OMIM: 156610,191130,615771) tubulin bet ( 444) 2893 649.3 5.7e-186 NP_821080 (OMIM: 610031,612850) tubulin beta-2B ch ( 445) 2885 647.6 1.9e-185 NP_001060 (OMIM: 615101,615763) tubulin beta-2A ch ( 445) 2866 643.4 3.6e-184 NP_006077 (OMIM: 600638,602661,614039) tubulin bet ( 450) 2787 625.9 6.6e-179 NP_001290453 (OMIM: 615103) tubulin beta-6 chain i ( 446) 2776 623.5 3.5e-178 NP_115914 (OMIM: 615103) tubulin beta-6 chain isof ( 446) 2776 623.5 3.5e-178 NP_001280141 (OMIM: 156610,191130,615771) tubulin ( 464) 2771 622.4 7.8e-178 NP_817124 (OMIM: 616768,616780) tubulin beta-8 cha ( 444) 2749 617.5 2.2e-176 NP_001280143 (OMIM: 156610,191130,615771) tubulin ( 400) 2518 566.4 4.9e-161 NP_001276059 (OMIM: 602662) tubulin beta-4A chain ( 372) 2487 559.5 5.4e-159 NP_001276060 (OMIM: 602662) tubulin beta-4A chain ( 372) 2487 559.5 5.4e-159 NP_110400 (OMIM: 612901,613112) tubulin beta-1 cha ( 451) 2424 545.6 9.9e-155 NP_001280144 (OMIM: 156610,191130,615771) tubulin ( 372) 2418 544.2 2.1e-154 NP_001280145 (OMIM: 156610,191130,615771) tubulin ( 372) 2418 544.2 2.1e-154 NP_001290456 (OMIM: 615103) tubulin beta-6 chain i ( 374) 2361 531.6 1.3e-150 NP_001184110 (OMIM: 600638,602661,614039) tubulin ( 378) 2351 529.4 6.2e-150 XP_011517761 (OMIM: 616768,616780) PREDICTED: tubu ( 372) 2322 523.0 5.2e-148 XP_016883574 (OMIM: 612901,613112) PREDICTED: tubu ( 429) 2273 512.2 1.1e-144 NP_001297244 (OMIM: 615101,615763) tubulin beta-2A ( 360) 2253 507.7 2e-143 NP_001290457 (OMIM: 615103) tubulin beta-6 chain i ( 381) 2222 500.9 2.4e-141 NP_001290455 (OMIM: 615103) tubulin beta-6 chain i ( 409) 2213 498.9 1e-140 XP_016871681 (OMIM: 616768,616780) PREDICTED: tubu ( 332) 2044 461.4 1.6e-129 XP_016871682 (OMIM: 616768,616780) PREDICTED: tubu ( 332) 2044 461.4 1.6e-129 NP_001290458 (OMIM: 615103) tubulin beta-6 chain i ( 300) 1864 421.6 1.4e-117 NP_001290459 (OMIM: 615103) tubulin beta-6 chain i ( 300) 1864 421.6 1.4e-117 XP_011517762 (OMIM: 616768,616780) PREDICTED: tubu ( 291) 1671 378.9 9.7e-105 NP_006073 (OMIM: 602530) tubulin alpha-1B chain [H ( 451) 1290 294.7 3.3e-79 NP_001257328 (OMIM: 602529,611603) tubulin alpha-1 ( 451) 1282 292.9 1.1e-78 NP_006000 (OMIM: 602529,611603) tubulin alpha-1A c ( 451) 1282 292.9 1.1e-78 NP_005991 (OMIM: 191110,616208) tubulin alpha-4A c ( 448) 1261 288.3 2.8e-77 NP_005992 (OMIM: 602528) tubulin alpha-3C/D chain ( 450) 1253 286.5 9.5e-77 NP_061816 (OMIM: 605742,613180) tubulin alpha-8 ch ( 449) 1238 283.2 9.5e-76 NP_001265481 (OMIM: 191110,616208) tubulin alpha-4 ( 433) 1212 277.4 5e-74 NP_001257329 (OMIM: 602529,611603) tubulin alpha-1 ( 416) 1178 269.9 8.8e-72 NP_001180343 (OMIM: 605742,613180) tubulin alpha-8 ( 383) 1079 248.0 3.2e-65 NP_001061 (OMIM: 191135,615412) tubulin gamma-1 ch ( 451) 1003 231.2 4.3e-60 NP_057521 (OMIM: 605785) tubulin gamma-2 chain iso ( 451) 993 229.0 2e-59 NP_001280142 (OMIM: 156610,191130,615771) tubulin ( 242) 824 191.4 2.1e-48 XP_016860313 (OMIM: 191110,616208) PREDICTED: tubu ( 295) 770 179.6 9.9e-45 NP_001307438 (OMIM: 605785) tubulin gamma-2 chain ( 460) 615 145.4 3e-34 NP_001290454 (OMIM: 615103) tubulin beta-6 chain i ( 104) 557 132.2 6.5e-31 NP_057346 (OMIM: 607345) tubulin epsilon chain [Ho ( 475) 519 124.1 7.6e-28 XP_011522916 (OMIM: 605785) PREDICTED: tubulin gam ( 298) 510 122.0 2.1e-27 XP_016879942 (OMIM: 605785) PREDICTED: tubulin gam ( 298) 510 122.0 2.1e-27 XP_016879945 (OMIM: 605785) PREDICTED: tubulin gam ( 274) 475 114.3 4.1e-25 >>NP_001276058 (OMIM: 602662) tubulin beta-4A chain isof (444 aa) initn: 2983 init1: 2983 opt: 2983 Z-score: 3567.4 bits: 669.3 E(85289): 5.8e-192 Smith-Waterman score: 2983; 100.0% identity (100.0% similar) in 444 aa overlap (1-444:1-444) 10 20 30 40 50 60 pF1KE1 MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGNYV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGNYV 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDAVLDVV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDAVLDVV 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEFPDRIMNTFSVVPSPKVSDTVV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEFPDRIMNTFSVVPSPKVSDTVV 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE1 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE1 AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLSVQSKNSSYFVEWIPNNVKTAVCDIPPRG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLSVQSKNSSYFVEWIPNNVKTAVCDIPPRG 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE1 LKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 LKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 370 380 390 400 410 420 430 440 pF1KE1 EYQQYQDATAEEGEFEEEAEEEVA :::::::::::::::::::::::: NP_001 EYQQYQDATAEEGEFEEEAEEEVA 430 440 >>NP_006078 (OMIM: 602662) tubulin beta-4A chain isoform (444 aa) initn: 2983 init1: 2983 opt: 2983 Z-score: 3567.4 bits: 669.3 E(85289): 5.8e-192 Smith-Waterman score: 2983; 100.0% identity (100.0% similar) in 444 aa overlap (1-444:1-444) 10 20 30 40 50 60 pF1KE1 MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGNYV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGNYV 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDAVLDVV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDAVLDVV 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEFPDRIMNTFSVVPSPKVSDTVV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEFPDRIMNTFSVVPSPKVSDTVV 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE1 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE1 AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLSVQSKNSSYFVEWIPNNVKTAVCDIPPRG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLSVQSKNSSYFVEWIPNNVKTAVCDIPPRG 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE1 LKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 LKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 370 380 390 400 410 420 430 440 pF1KE1 EYQQYQDATAEEGEFEEEAEEEVA :::::::::::::::::::::::: NP_006 EYQQYQDATAEEGEFEEEAEEEVA 430 440 >>NP_001276056 (OMIM: 602662) tubulin beta-4A chain isof (489 aa) initn: 2983 init1: 2983 opt: 2983 Z-score: 3566.8 bits: 669.3 E(85289): 6.2e-192 Smith-Waterman score: 2983; 100.0% identity (100.0% similar) in 444 aa overlap (1-444:46-489) 10 20 30 pF1KE1 MREIVHLQAGQCGNQIGAKFWEVISDEHGI :::::::::::::::::::::::::::::: NP_001 AVSAASSTLAAAAAPRARATAAASTLSATAMREIVHLQAGQCGNQIGAKFWEVISDEHGI 20 30 40 50 60 70 40 50 60 70 80 90 pF1KE1 DPTGTYHGDSDLQLERINVYYNEATGGNYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 DPTGTYHGDSDLQLERINVYYNEATGGNYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNF 80 90 100 110 120 130 100 110 120 130 140 150 pF1KE1 VFGQSGAGNNWAKGHYTEGAELVDAVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 VFGQSGAGNNWAKGHYTEGAELVDAVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTL 140 150 160 170 180 190 160 170 180 190 200 210 pF1KE1 LISKIREEFPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 LISKIREEFPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDI 200 210 220 230 240 250 220 230 240 250 260 270 pF1KE1 CFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 CFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGF 260 270 280 290 300 310 280 290 300 310 320 330 pF1KE1 APLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 APLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQM 320 330 340 350 360 370 340 350 360 370 380 390 pF1KE1 LSVQSKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 LSVQSKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFR 380 390 400 410 420 430 400 410 420 430 440 pF1KE1 RKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEGEFEEEAEEEVA :::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 RKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEGEFEEEAEEEVA 440 450 460 470 480 >>NP_001276052 (OMIM: 602662) tubulin beta-4A chain isof (495 aa) initn: 2983 init1: 2983 opt: 2983 Z-score: 3566.7 bits: 669.3 E(85289): 6.3e-192 Smith-Waterman score: 2983; 100.0% identity (100.0% similar) in 444 aa overlap (1-444:52-495) 10 20 30 pF1KE1 MREIVHLQAGQCGNQIGAKFWEVISDEHGI :::::::::::::::::::::::::::::: NP_001 AVSAASSTLAAAAAPRARATAAASTLSATAMREIVHLQAGQCGNQIGAKFWEVISDEHGI 30 40 50 60 70 80 40 50 60 70 80 90 pF1KE1 DPTGTYHGDSDLQLERINVYYNEATGGNYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 DPTGTYHGDSDLQLERINVYYNEATGGNYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNF 90 100 110 120 130 140 100 110 120 130 140 150 pF1KE1 VFGQSGAGNNWAKGHYTEGAELVDAVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 VFGQSGAGNNWAKGHYTEGAELVDAVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTL 150 160 170 180 190 200 160 170 180 190 200 210 pF1KE1 LISKIREEFPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 LISKIREEFPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDI 210 220 230 240 250 260 220 230 240 250 260 270 pF1KE1 CFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 CFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGF 270 280 290 300 310 320 280 290 300 310 320 330 pF1KE1 APLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 APLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQM 330 340 350 360 370 380 340 350 360 370 380 390 pF1KE1 LSVQSKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 LSVQSKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFR 390 400 410 420 430 440 400 410 420 430 440 pF1KE1 RKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEGEFEEEAEEEVA :::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 RKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEGEFEEEAEEEVA 450 460 470 480 490 >>NP_006079 (OMIM: 602660) tubulin beta-4B chain [Homo s (445 aa) initn: 2893 init1: 2893 opt: 2944 Z-score: 3520.7 bits: 660.6 E(85289): 2.3e-189 Smith-Waterman score: 2944; 98.4% identity (99.8% similar) in 445 aa overlap (1-444:1-445) 10 20 30 40 50 60 pF1KE1 MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGNYV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::.:: NP_006 MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDAVLDVV ::::::::::::::::::::::::::::::::::::::::::::::::::::::.::::: NP_006 PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEFPDRIMNTFSVVPSPKVSDTVV ::::::::::::::::::::::::::::::::::::::.::::::::::::::::::::: NP_006 RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE1 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE1 AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLSVQSKNSSYFVEWIPNNVKTAVCDIPPRG :::::::::::::::::::::::::::::::.::.::::::::::::::::::::::::: NP_006 AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE1 LKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS :::.:::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 370 380 390 400 410 420 430 440 pF1KE1 EYQQYQDATAEE-GEFEEEAEEEVA :::::::::::: :::::::::::: NP_006 EYQQYQDATAEEEGEFEEEAEEEVA 430 440 >>NP_821133 (OMIM: 156610,191130,615771) tubulin beta ch (444 aa) initn: 2909 init1: 2872 opt: 2893 Z-score: 3459.8 bits: 649.3 E(85289): 5.7e-186 Smith-Waterman score: 2893; 96.8% identity (99.3% similar) in 443 aa overlap (1-442:1-443) 10 20 30 40 50 60 pF1KE1 MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGNYV ::::::.:::::::::::::::::::::::::::::::::::::.::.:::::::::.:: NP_821 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEATGGKYV 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDAVLDVV :::.::::::::::::::::::::::::::::::::::::::::::::::::::.::::: NP_821 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEFPDRIMNTFSVVPSPKVSDTVV ::::::::::::::::::::::::::::::::::::::.::::::::::::::::::::: NP_821 RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_821 EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE1 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM ::::::::::::::::::::::::::::::::::::::::::::::::::::.::::::: NP_821 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQVFDAKNMM 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE1 AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLSVQSKNSSYFVEWIPNNVKTAVCDIPPRG :::::::::::::::::::::::::::::::.::.::::::::::::::::::::::::: NP_821 AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE1 LKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS ::::.::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_821 LKMAVTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 370 380 390 400 410 420 430 440 pF1KE1 EYQQYQDATAEEGE-FEEEAEEEVA :::::::::::: : : :::::: NP_821 EYQQYQDATAEEEEDFGEEAEEEA 430 440 >>NP_821080 (OMIM: 610031,612850) tubulin beta-2B chain (445 aa) initn: 2892 init1: 2860 opt: 2885 Z-score: 3450.2 bits: 647.6 E(85289): 1.9e-185 Smith-Waterman score: 2885; 95.5% identity (99.1% similar) in 445 aa overlap (1-444:1-445) 10 20 30 40 50 60 pF1KE1 MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGNYV ::::::.:::::::::::::::::::::::::::.:::::::::::::::::::::..:: NP_821 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQLERINVYYNEATGNKYV 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDAVLDVV :::.::::::::::::::::::::::::::::::::::::::::::::::::::.::::: NP_821 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEFPDRIMNTFSVVPSPKVSDTVV :::.::::::::::::::::::::::::::::::::::.::::::::::.:::::::::: NP_821 RKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPKVSDTVV 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_821 EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE1 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM :::::::::::::::::::::::::::::::::::::::::::::::::::::::.:::: NP_821 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDSKNMM 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE1 AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLSVQSKNSSYFVEWIPNNVKTAVCDIPPRG :::::::::::::::.:::::::::::::::.::.::::::::::::::::::::::::: NP_821 AACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE1 LKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS :::.:::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_821 LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 370 380 390 400 410 420 430 440 pF1KE1 EYQQYQDATAEE-GEFEEEAEEEVA ::::::::::.: :::::: :. : NP_821 EYQQYQDATADEQGEFEEEEGEDEA 430 440 >>NP_001060 (OMIM: 615101,615763) tubulin beta-2A chain (445 aa) initn: 2873 init1: 2841 opt: 2866 Z-score: 3427.5 bits: 643.4 E(85289): 3.6e-184 Smith-Waterman score: 2866; 95.1% identity (98.9% similar) in 445 aa overlap (1-444:1-445) 10 20 30 40 50 60 pF1KE1 MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGNYV ::::::.:::::::::::::::::::::::::::.:::::::::::::::::::.:..:: NP_001 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQLERINVYYNEAAGNKYV 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDAVLDVV :::.::::::::::::::::::::::::::::::::::::::::::::::::::.::::: NP_001 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEFPDRIMNTFSVVPSPKVSDTVV :::.::::::::::::::::::::::::::::::::::.::::::::::.:::::::::: NP_001 RKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPKVSDTVV 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL :::::::::::::::::::: ::::::::::::::::::::::::::::::::::::::: NP_001 EPYNATLSVHQLVENTDETYSIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE1 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM :::::::::::::::::::::::::::::::::::::::::::::::::::::::.:::: NP_001 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDSKNMM 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE1 AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLSVQSKNSSYFVEWIPNNVKTAVCDIPPRG :::::::::::::::.:::::::::::::::.::.::::::::::::::::::::::::: NP_001 AACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE1 LKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS :::.:::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 370 380 390 400 410 420 430 440 pF1KE1 EYQQYQDATAEE-GEFEEEAEEEVA ::::::::::.: :::::: :. : NP_001 EYQQYQDATADEQGEFEEEEGEDEA 430 440 >>NP_006077 (OMIM: 600638,602661,614039) tubulin beta-3 (450 aa) initn: 2768 init1: 2768 opt: 2787 Z-score: 3333.0 bits: 625.9 E(85289): 6.6e-179 Smith-Waterman score: 2787; 92.3% identity (98.2% similar) in 443 aa overlap (1-442:1-443) 10 20 30 40 50 60 pF1KE1 MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGNYV ::::::.:::::::::::::::::::::::::.:.: ::::::::::.::::::.. .:: NP_006 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPSGNYVGDSDLQLERISVYYNEASSHKYV 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDAVLDVV :::.::::::::::::::: ::..::::::.:::::::::::::::::::::::.::::: NP_006 PRAILVDLEPGTMDSVRSGAFGHLFRPDNFIFGQSGAGNNWAKGHYTEGAELVDSVLDVV 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEFPDRIMNTFSVVPSPKVSDTVV ::: :.::::::::::::::::::::::::::::.:::.::::::::::::::::::::: NP_006 RKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKVREEYPDRIMNTFSVVPSPKVSDTVV 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL ::::::::.::::::::::::::::::::::::::::.:::::::::::::::::::: : NP_006 EPYNATLSIHQLVENTDETYCIDNEALYDICFRTLKLATPTYGDLNHLVSATMSGVTTSL 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE1 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM ::::::::::::::::::::::::::::::::::.::::::::::::::::::::::::: NP_006 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDAKNMM 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE1 AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLSVQSKNSSYFVEWIPNNVKTAVCDIPPRG ::::::::::::::.::::::::::::::::..:::::::::::::::::.::::::::: NP_006 AACDPRHGRYLTVATVFRGRMSMKEVDEQMLAIQSKNSSYFVEWIPNNVKVAVCDIPPRG 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE1 LKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS :::..::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 LKMSSTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 370 380 390 400 410 420 430 440 pF1KE1 EYQQYQDATAEE-GEFEEEAEEEVA :::::::::::: ::. :. ::: NP_006 EYQQYQDATAEEEGEMYEDDEEESEAQGPK 430 440 450 >>NP_001290453 (OMIM: 615103) tubulin beta-6 chain isofo (446 aa) initn: 2772 init1: 2772 opt: 2776 Z-score: 3319.9 bits: 623.5 E(85289): 3.5e-178 Smith-Waterman score: 2776; 92.3% identity (97.5% similar) in 443 aa overlap (1-441:1-443) 10 20 30 40 50 60 pF1KE1 MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGNYV ::::::.::::::::::.::::::::::::::.: : ::: ::::::::::::... .:: NP_001 MREIVHIQAGQCGNQIGTKFWEVISDEHGIDPAGGYVGDSALQLERINVYYNESSSQKYV 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDAVLDVV :::.:::::::::::::::::::.::::::.:::.::::::::::::::::::::::::: NP_001 PRAALVDLEPGTMDSVRSGPFGQLFRPDNFIFGQTGAGNNWAKGHYTEGAELVDAVLDVV 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEFPDRIMNTFSVVPSPKVSDTVV ::: : :::::::::::::::::::::::::::::::::::::::::::.:::::::::: NP_001 RKECEHCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEFPDRIMNTFSVMPSPKVSDTVV 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: : NP_001 EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTSL 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE1 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM ::::::::::::::::::::::::::::::::::::::::::::::::::::::::.::: NP_001 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDARNMM 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE1 AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLSVQSKNSSYFVEWIPNNVKTAVCDIPPRG ::::::::::::::.:::: :::::::::::..:::::::::::::::::.::::::::: NP_001 AACDPRHGRYLTVATVFRGPMSMKEVDEQMLAIQSKNSSYFVEWIPNNVKVAVCDIPPRG 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE1 LKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS ::::.::::::::::::::::::::.:::::::::::.:::::::::::::::::::::: NP_001 LKMASTFIGNSTAIQELFKRISEQFSAMFRRKAFLHWFTGEGMDEMEFTEAESNMNDLVS 370 380 390 400 410 420 430 440 pF1KE1 EYQQYQDATAEEGE--FEEEAEEEVA ::::::::::..:: ::.: :: NP_001 EYQQYQDATANDGEEAFEDEEEEIDG 430 440 444 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 13:30:54 2016 done: Sun Nov 6 13:30:55 2016 Total Scan time: 7.760 Total Display time: 0.080 Function used was FASTA [36.3.4 Apr, 2011]