FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1657, 173 aa 1>>>pF1KE1657 173 - 173 aa - 173 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.4070+/-0.000766; mu= 11.5453+/- 0.046 mean_var=56.2194+/-11.280, 0's: 0 Z-trim(107.3): 3 B-trim: 73 in 1/50 Lambda= 0.171053 statistics sampled from 9517 (9518) to 9517 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.675), E-opt: 0.2 (0.292), width: 16 Scan time: 1.870 The best scores are: opt bits E(32554) CCDS12133.1 MYDGF gene_id:56005|Hs108|chr19 ( 173) 1151 291.8 1.4e-79 >>CCDS12133.1 MYDGF gene_id:56005|Hs108|chr19 (173 aa) initn: 1151 init1: 1151 opt: 1151 Z-score: 1542.1 bits: 291.8 E(32554): 1.4e-79 Smith-Waterman score: 1151; 100.0% identity (100.0% similar) in 173 aa overlap (1-173:1-173) 10 20 30 40 50 60 pF1KE1 MAAPSGGWNGVGASLWAALLLGAVALRPAEAVSEPTTVAFDVRPGGVVHSFSHNVGPGDK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS12 MAAPSGGWNGVGASLWAALLLGAVALRPAEAVSEPTTVAFDVRPGGVVHSFSHNVGPGDK 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 YTCMFTYASQGGTNEQWQMSLGTSEDHQHFTCTIWRPQGKSYLYFTQFKAEVRGAEIEYA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS12 YTCMFTYASQGGTNEQWQMSLGTSEDHQHFTCTIWRPQGKSYLYFTQFKAEVRGAEIEYA 70 80 90 100 110 120 130 140 150 160 170 pF1KE1 MAYSKAAFERESDVPLKTEEFEVTKTAVAHRPGAFKAELSKLVIVAKASRTEL ::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS12 MAYSKAAFERESDVPLKTEEFEVTKTAVAHRPGAFKAELSKLVIVAKASRTEL 130 140 150 160 170 173 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 13:31:56 2016 done: Sun Nov 6 13:31:56 2016 Total Scan time: 1.870 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]