Result of FASTA (omim) for pFN21AB8883
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB8883, 184 aa
  1>>>pF1KB8883 184 - 184 aa - 184 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 8.0496+/-0.000291; mu= 3.1404+/- 0.018
 mean_var=227.4590+/-46.327, 0's: 0 Z-trim(124.8): 262  B-trim: 21 in 1/61
 Lambda= 0.085040
 statistics sampled from 46944 (47246) to 46944 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.842), E-opt: 0.2 (0.554), width:  16
 Scan time:  6.860

The best scores are:                                      opt bits E(85289)
NP_116142 (OMIM: 605726,610362,610381,613757) reti ( 184) 1287 169.1 3.6e-42
NP_001306003 (OMIM: 605726,610362,610381,613757) r ( 230) 1287 169.2 4.2e-42
NP_038463 (OMIM: 601881,611038) retinal homeobox p ( 346)  535 77.1 3.3e-14
NP_068745 (OMIM: 605420,609597,613451,615529) home ( 411)  380 58.2   2e-08
XP_016870292 (OMIM: 604675) PREDICTED: paired meso ( 193)  365 56.0 4.2e-08
NP_006483 (OMIM: 136760,606014) homeobox protein a ( 343)  366 56.4 5.7e-08
NP_057391 (OMIM: 604675) paired mesoderm homeobox  ( 253)  363 55.9   6e-08
NP_620689 (OMIM: 300004,300215,300382,300419,30835 ( 562)  365 56.5 8.7e-08
NP_001290437 (OMIM: 612019) intestine-specific hom ( 245)  358 55.2   9e-08
NP_005160 (OMIM: 602078,602753) paired mesoderm ho ( 284)  348 54.1 2.3e-07
NP_703149 (OMIM: 300154) homeobox protein ESX1 [Ho ( 406)  347 54.1 3.2e-07
NP_001263380 (OMIM: 606701) dorsal root ganglia ho ( 263)  335 52.5 6.7e-07
NP_003915 (OMIM: 209880,603851,613013) paired meso ( 314)  335 52.5 7.5e-07
NP_008833 (OMIM: 167420,202650) paired mesoderm ho ( 217)  324 51.0 1.5e-06
NP_115485 (OMIM: 604529) homeobox protein orthoped ( 325)  327 51.6 1.5e-06
XP_016883326 (OMIM: 122000,148300,605020,614195) P ( 280)  324 51.1 1.8e-06
XP_006711451 (OMIM: 167420,202650) PREDICTED: pair ( 198)  321 50.6 1.8e-06
NP_001243201 (OMIM: 122000,148300,605020,614195) v ( 301)  324 51.2 1.9e-06
NP_073207 (OMIM: 167420,202650) paired mesoderm ho ( 245)  321 50.7 2.1e-06
NP_055403 (OMIM: 122000,148300,605020,614195) visu ( 365)  324 51.3 2.1e-06
NP_878314 (OMIM: 142993,610092,610093) visual syst ( 361)  322 51.0 2.5e-06
NP_852126 (OMIM: 122880,148820,193500,268220,60659 ( 403)  322 51.1 2.7e-06
NP_852125 (OMIM: 122880,148820,193500,268220,60659 ( 407)  322 51.1 2.7e-06
NP_001128726 (OMIM: 167410,268220) paired box prot ( 505)  323 51.3 2.9e-06
NP_039236 (OMIM: 167410,268220) paired box protein ( 518)  323 51.3 2.9e-06
NP_002575 (OMIM: 167410,268220) paired box protein ( 520)  323 51.3 2.9e-06
NP_852122 (OMIM: 122880,148820,193500,268220,60659 ( 479)  322 51.1   3e-06
NP_001120838 (OMIM: 122880,148820,193500,268220,60 ( 483)  322 51.1 3.1e-06
NP_852123 (OMIM: 122880,148820,193500,268220,60659 ( 484)  322 51.1 3.1e-06
NP_852124 (OMIM: 122880,148820,193500,268220,60659 ( 505)  322 51.2 3.1e-06
NP_001297090 (OMIM: 106210,120430,136520,148190,16 ( 286)  314 49.9 4.2e-06
NP_001297089 (OMIM: 106210,120430,136520,148190,16 ( 286)  314 49.9 4.2e-06
NP_001297088 (OMIM: 106210,120430,136520,148190,16 ( 401)  314 50.1 5.3e-06
NP_001245394 (OMIM: 106210,120430,136520,148190,16 ( 422)  314 50.1 5.5e-06
NP_001121084 (OMIM: 106210,120430,136520,148190,16 ( 422)  314 50.1 5.5e-06
NP_000271 (OMIM: 106210,120430,136520,148190,16555 ( 422)  314 50.1 5.5e-06
NP_001245393 (OMIM: 106210,120430,136520,148190,16 ( 422)  314 50.1 5.5e-06
NP_001245391 (OMIM: 106210,120430,136520,148190,16 ( 436)  314 50.1 5.6e-06
NP_001595 (OMIM: 106210,120430,136520,148190,16555 ( 436)  314 50.1 5.6e-06
NP_001297087 (OMIM: 106210,120430,136520,148190,16 ( 436)  314 50.1 5.6e-06
NP_001245392 (OMIM: 106210,120430,136520,148190,16 ( 436)  314 50.1 5.6e-06
NP_006252 (OMIM: 262600,601538) homeobox protein p ( 226)  307 49.0 6.5e-06
XP_011537084 (OMIM: 601527,613456) PREDICTED: ALX  ( 231)  303 48.5 9.3e-06
NP_005020 (OMIM: 107250,602669,610623) pituitary h ( 302)  303 48.6 1.1e-05
NP_008913 (OMIM: 601527,613456) ALX homeobox prote ( 326)  303 48.6 1.2e-05
NP_000545 (OMIM: 120970,268000,602225,613829) cone ( 299)  298 48.0 1.7e-05
XP_016862544 (OMIM: 602504) PREDICTED: short statu ( 190)  293 47.2 1.9e-05
XP_006713791 (OMIM: 602504) PREDICTED: short statu ( 190)  293 47.2 1.9e-05
XP_016862542 (OMIM: 602504) PREDICTED: short statu ( 204)  293 47.2   2e-05
XP_016862543 (OMIM: 602504) PREDICTED: short statu ( 204)  293 47.2   2e-05


>>NP_116142 (OMIM: 605726,610362,610381,613757) retina a  (184 aa)
 initn: 1287 init1: 1287 opt: 1287  Z-score: 878.0  bits: 169.1 E(85289): 3.6e-42
Smith-Waterman score: 1287; 100.0% identity (100.0% similar) in 184 aa overlap (1-184:1-184)

               10        20        30        40        50        60
pF1KB8 MFLSPGEGPATEGGGLGPGEEAPKKKHRRNRTTFTTYQLHQLERAFEASHYPDVYSREEL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_116 MFLSPGEGPATEGGGLGPGEEAPKKKHRRNRTTFTTYQLHQLERAFEASHYPDVYSREEL
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 AAKVHLPEVRVQVWFQNRRAKWRRQERLESGSGAVAAPRLPEAPALPFARPPAMSLPLEP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_116 AAKVHLPEVRVQVWFQNRRAKWRRQERLESGSGAVAAPRLPEAPALPFARPPAMSLPLEP
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB8 WLGPGPPAVPGLPRLLGPGPGLQASFGPHAFAPTFADGFALEEASLRLLAKEHAQALDRA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_116 WLGPGPPAVPGLPRLLGPGPGLQASFGPHAFAPTFADGFALEEASLRLLAKEHAQALDRA
              130       140       150       160       170       180

           
pF1KB8 WPPA
       ::::
NP_116 WPPA
           

>>NP_001306003 (OMIM: 605726,610362,610381,613757) retin  (230 aa)
 initn: 1287 init1: 1287 opt: 1287  Z-score: 876.8  bits: 169.2 E(85289): 4.2e-42
Smith-Waterman score: 1287; 100.0% identity (100.0% similar) in 184 aa overlap (1-184:47-230)

                                             10        20        30
pF1KB8                               MFLSPGEGPATEGGGLGPGEEAPKKKHRRN
                                     ::::::::::::::::::::::::::::::
NP_001 AWGSPALSLPVAPPAVSPPSVPLPSHQVGAMFLSPGEGPATEGGGLGPGEEAPKKKHRRN
         20        30        40        50        60        70      

               40        50        60        70        80        90
pF1KB8 RTTFTTYQLHQLERAFEASHYPDVYSREELAAKVHLPEVRVQVWFQNRRAKWRRQERLES
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RTTFTTYQLHQLERAFEASHYPDVYSREELAAKVHLPEVRVQVWFQNRRAKWRRQERLES
         80        90       100       110       120       130      

              100       110       120       130       140       150
pF1KB8 GSGAVAAPRLPEAPALPFARPPAMSLPLEPWLGPGPPAVPGLPRLLGPGPGLQASFGPHA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GSGAVAAPRLPEAPALPFARPPAMSLPLEPWLGPGPPAVPGLPRLLGPGPGLQASFGPHA
        140       150       160       170       180       190      

              160       170       180    
pF1KB8 FAPTFADGFALEEASLRLLAKEHAQALDRAWPPA
       ::::::::::::::::::::::::::::::::::
NP_001 FAPTFADGFALEEASLRLLAKEHAQALDRAWPPA
        200       210       220       230

>>NP_038463 (OMIM: 601881,611038) retinal homeobox prote  (346 aa)
 initn: 664 init1: 444 opt: 535  Z-score: 376.1  bits: 77.1 E(85289): 3.3e-14
Smith-Waterman score: 550; 55.6% identity (66.9% similar) in 178 aa overlap (4-155:112-283)

                                            10        20        30 
pF1KB8                            MFLSPGE--GPATEGGGLGPGEEAPKKKHRRNR
                                     :::   ::::  . :.  :: :::::::::
NP_038 EPSPPPAPAPAPEYEAPRPYCPKEPGEARPSPGLPVGPATGEAKLSE-EEQPKKKHRRNR
              90       100       110       120        130       140

              40        50        60        70        80        90 
pF1KB8 TTFTTYQLHQLERAFEASHYPDVYSREELAAKVHLPEVRVQVWFQNRRAKWRRQERLESG
       :::::::::.:::::: :::::::::::::.::.:::::::::::::::::::::.::  
NP_038 TTFTTYQLHELERAFEKSHYPDVYSREELAGKVNLPEVRVQVWFQNRRAKWRRQEKLE--
              150       160       170       180       190          

             100       110                          120            
pF1KB8 SGAVAAPRLPEAPALPFAR-PPAMSL------------------PLEPWLGP-----GPP
          :.. .: ..: : :.: ::. .:                  ::: ::::     :  
NP_038 ---VSSMKLQDSPLLSFSRSPPSATLSPLGAGPGSGGGPAGGALPLESWLGPPLPGGGAT
         200       210       220       230       240       250     

       130       140       150       160       170       180       
pF1KB8 AVPGLPRLLGPGPGLQASFGPHAFAPTFADGFALEEASLRLLAKEHAQALDRAWPPA   
       :. .:: .  :. .: ::. :    : :                                
NP_038 ALQSLPGFGPPAQSLPASYTPPPPPPPFLNSPPLGPGLQPLAPPPPSYPCGPGFGDKFPL
         260       270       280       290       300       310     

>>NP_068745 (OMIM: 605420,609597,613451,615529) homeobox  (411 aa)
 initn: 361 init1: 327 opt: 380  Z-score: 272.4  bits: 58.2 E(85289): 2e-08
Smith-Waterman score: 380; 46.7% identity (70.4% similar) in 135 aa overlap (21-153:208-339)

                         10        20        30        40        50
pF1KB8           MFLSPGEGPATEGGGLGPGEEAPKKKHRRNRTTFTTYQLHQLERAFEASH
                                     :. : :.::::::::.:::..::..:. .:
NP_068 SYLSVKEAGVKGPQDRASSDLPSPLEKADSESNKGKKRRNRTTFTSYQLEELEKVFQKTH
       180       190       200       210       220       230       

               60        70        80        90       100          
pF1KB8 YPDVYSREELAAKVHLPEVRVQVWFQNRRAKWRRQERLESGSGAVAAPRLPEAPALPF-A
       :::::.::.:: .. : :.::::::::::::::..::.  :.   .  ..  :  ::. .
NP_068 YPDVYAREQLAMRTDLTEARVQVWFQNRRAKWRKRERF--GQMQQVRTHFSTAYELPLLT
       240       250       260       270         280       290     

     110       120        130       140       150       160        
pF1KB8 RPPAMSLPLEP-WLGPGPPAVPGLPRLLGPGPGLQASFGPHAFAPTFADGFALEEASLRL
       :   ..   .: ::: .  : : .:  . :   . : ..:::  :               
NP_068 RAENYAQIQNPSWLGNNGAASP-VPACVVPCDPVPACMSPHAHPPGSGASSVTDFLSVSG
         300       310        320       330       340       350    

      170       180                                             
pF1KB8 LAKEHAQALDRAWPPA                                         
                                                                
NP_068 AGSHVGQTHMGSLFGAASLSPGLNGYELNGEPDRKTSSIAALRMKAKEHSAAISWAT
          360       370       380       390       400       410 

>>XP_016870292 (OMIM: 604675) PREDICTED: paired mesoderm  (193 aa)
 initn: 392 init1: 307 opt: 365  Z-score: 266.4  bits: 56.0 E(85289): 4.2e-08
Smith-Waterman score: 365; 47.2% identity (64.2% similar) in 176 aa overlap (3-172:22-181)

                                  10        20         30        40
pF1KB8                    MFLSPGEGPATEGGGLGPGEEAP-KKKHRRNRTTFTTYQLH
                            :. :::   :  . : :  :  :::.:::::::.. ::.
XP_016 MGPLHRETGPERSGHRLKVTELGCGEG---ECPSPGRGSAAKRKKKQRRNRTTFNSSQLQ
               10        20           30        40        50       

               50        60        70        80          90        
pF1KB8 QLERAFEASHYPDVYSREELAAKVHLPEVRVQVWFQNRRAKWRRQER--LESGSGAVAAP
        :::.:: .::::.. ::::: .:.: :.::::::::::::.::.::  : : :...   
XP_016 ALERVFERTHYPDAFVREELARRVNLSEARVQVWFQNRRAKFRRNERAMLASRSASLLKS
        60        70        80        90       100       110       

      100         110       120        130       140       150     
pF1KB8 RLPEAPA-LPFA-RPPAMSLPLEPWLGPGP-PAVPGLPRLLGPGPGLQASFGPHAFAPTF
          ::    : : :: :.:     : . .:  .::  :   .::     : :: . . ..
XP_016 YSQEAAIEQPVAPRPTALSPDYLSWTASSPYSTVP--PY--SPG-----SSGPATPGVNM
       120       130       140       150                160        

         160       170       180    
pF1KB8 ADGFALEEASLRLLAKEHAQALDRAWPPA
       :...:    :::: :::            
XP_016 ANSIA----SLRLKAKEFSLHHSQVPTVN
      170           180       190   

>>NP_006483 (OMIM: 136760,606014) homeobox protein arist  (343 aa)
 initn: 349 init1: 318 opt: 366  Z-score: 264.0  bits: 56.4 E(85289): 5.7e-08
Smith-Waterman score: 366; 43.4% identity (63.3% similar) in 166 aa overlap (4-155:124-284)

                                          10             20        
pF1KB8                            MFLSPGEGPATEGGGLGPG-----EEAPKK-KH
                                     :::   :.    :.::     : : .: :.
NP_006 EEKTSKAASFPQLPLDCRGGPRDGPSNLQGSPGPCLASLHLPLSPGLPDSMELAKNKSKK
           100       110       120       130       140       150   

        30        40        50        60        70        80       
pF1KB8 RRNRTTFTTYQLHQLERAFEASHYPDVYSREELAAKVHLPEVRVQVWFQNRRAKWRRQER
       :::::::.:.::..::..:. .::::::.::.:: .. : :.::::::::::::::..::
NP_006 RRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQVWFQNRRAKWRKRER
           160       170       180       190       200       210   

        90       100       110         120         130             
pF1KB8 LESGSGAVAAPRLPEAPALPFARPPAM-SLP-LEP--WLGPGPPAVPGLPRLLGP----G
            : .   : : . :  ..  :   : : :.   : .::  . :: : :..:    .
NP_006 Y----GKIQEGRNPFTAAYDISVLPRTDSHPQLQNSLWASPGSGS-PGGPCLVSPEGIPS
               220       230       240       250        260        

     140       150       160       170       180                   
pF1KB8 PGLQASFGPHAFAPTFADGFALEEASLRLLAKEHAQALDRAWPPA               
       : ..    ::. .  :                                            
NP_006 PCMSPYSHPHGSVAGFMGVPAPSAAHPGIYSIHGFPPTLGGHSFEPSSDGDYKSPSLVSL
      270       280       290       300       310       320        

>>NP_057391 (OMIM: 604675) paired mesoderm homeobox prot  (253 aa)
 initn: 412 init1: 307 opt: 363  Z-score: 263.7  bits: 55.9 E(85289): 6e-08
Smith-Waterman score: 363; 45.2% identity (64.4% similar) in 177 aa overlap (4-172:78-241)

                                          10        20           30
pF1KB8                            MFLSPGEGPATEGGGLGPGEEAP---KKKHRRN
                                     : .:.   .:   .::. .    :::.:::
NP_057 EVAAAGRLAARPGARAEAREGAAREPSGGSSGSEAAPQDGECPSPGRGSAAKRKKKQRRN
        50        60        70        80        90       100       

               40        50        60        70        80          
pF1KB8 RTTFTTYQLHQLERAFEASHYPDVYSREELAAKVHLPEVRVQVWFQNRRAKWRRQER--L
       ::::.. ::. :::.:: .::::.. ::::: .:.: :.::::::::::::.::.::  :
NP_057 RTTFNSSQLQALERVFERTHYPDAFVREELARRVNLSEARVQVWFQNRRAKFRRNERAML
       110       120       130       140       150       160       

       90       100         110       120        130       140     
pF1KB8 ESGSGAVAAPRLPEAPA-LPFA-RPPAMSLPLEPWLGPGP-PAVPGLPRLLGPGPGLQAS
        : :...      ::    : : :: :.:     : . .:  .::  :   .::     :
NP_057 ASRSASLLKSYSQEAAIEQPVAPRPTALSPDYLSWTASSPYSTVP--PY--SPG-----S
       170       180       190       200       210                 

         150       160       170       180    
pF1KB8 FGPHAFAPTFADGFALEEASLRLLAKEHAQALDRAWPPA
        :: . . ..:...:    :::: :::            
NP_057 SGPATPGVNMANSIA----SLRLKAKEFSLHHSQVPTVN
      220       230           240       250   

>>NP_620689 (OMIM: 300004,300215,300382,300419,308350,30  (562 aa)
 initn: 416 init1: 330 opt: 365  Z-score: 260.7  bits: 56.5 E(85289): 8.7e-08
Smith-Waterman score: 397; 50.4% identity (70.5% similar) in 129 aa overlap (6-132:307-426)

                                        10        20        30     
pF1KB8                          MFLSPGEGPATEGGGLGPGEEAPKKKHRRNRTTFT
                                     ::  .  ..:    :   :.:.:: :::::
NP_620 AAAAAVATEGGELSPKEELLLHPEDAEGKDGEDSVCLSAGSDSEEGLLKRKQRRYRTTFT
        280       290       300       310       320       330      

          40        50        60        70        80        90     
pF1KB8 TYQLHQLERAFEASHYPDVYSREELAAKVHLPEVRVQVWFQNRRAKWRRQERLESGSGAV
       .:::..:::::. .:::::..::::: .. : :.::::::::::::::..:.    .:: 
NP_620 SYQLEELERAFQKTHYPDVFTREELAMRLDLTEARVQVWFQNRRAKWRKREK----AGAQ
        340       350       360       370       380           390  

         100       110       120         130       140       150   
pF1KB8 AAPRLPEAPALPFARPPAMSLPLEPWL--GPGPPAVPGLPRLLGPGPGLQASFGPHAFAP
       . :     :.:::  : . . :: :.:  .: ::  :.:                     
NP_620 THP-----PGLPFPGPLSATHPLSPYLDASPFPPHHPALDSAWTAAAAAAAAAFPSLPPP
                 400       410       420       430       440       

           160       170       180                                 
pF1KB8 TFADGFALEEASLRLLAKEHAQALDRAWPPA                             
                                                                   
NP_620 PGSASLPPSGAPLGLSTFLGAAVFRHPAFISPAFGRLFSTMAPLTSASTAAALLRQPTPA
       450       460       470       480       490       500       

>>NP_001290437 (OMIM: 612019) intestine-specific homeobo  (245 aa)
 initn: 434 init1: 302 opt: 358  Z-score: 260.5  bits: 55.2 E(85289): 9e-08
Smith-Waterman score: 358; 39.2% identity (63.6% similar) in 176 aa overlap (5-169:57-227)

                                         10        20           30 
pF1KB8                           MFLSPGEGPATEGGGLGPGEEAP---KKKHRRNR
                                     :::. :. .:   : .. :   .:..:: :
NP_001 LSLSFSIEAILKRPARRSDMDRPEGPGEEGPGEAAASGSGLEKPPKDQPQEGRKSKRRVR
         30        40        50        60        70        80      

              40        50        60        70        80        90 
pF1KB8 TTFTTYQLHQLERAFEASHYPDVYSREELAAKVHLPEVRVQVWFQNRRAKWRRQERLESG
       ::::: :::.::. :. .:::::. : .:::...:::.:::.::::.:::::.::..   
NP_001 TTFTTEQLHELEKIFHFTHYPDVHIRSQLAARINLPEARVQIWFQNQRAKWRKQEKI---
         90       100       110       120       130       140      

              100            110       120       130         140   
pF1KB8 SGAVAAPR-LPEAP-ALP----FARPPAMSLPLEPWLGPGPPAVPGLPRLLGPG--PGLQ
        : ..::. : ::  :::     : :   :  :.  :.:     :.    :. .  :.  
NP_001 -GNLGAPQQLSEASVALPTNLDVAGPTWTSTALRR-LAPPTSCCPSAQDQLASAWFPAWI
            150       160       170        180       190       200 

           150       160       170       180       
pF1KB8 ASFGPHAFAPTFADGFALEEASLRLLAKEHAQALDRAWPPA   
       . .  : .    . :. .... . .:                  
NP_001 TLLPAHPWETQPVPGLPIHQTCIPVLCILPPPHPKWGSICATST
             210       220       230       240     

>>NP_005160 (OMIM: 602078,602753) paired mesoderm homeob  (284 aa)
 initn: 375 init1: 314 opt: 348  Z-score: 253.1  bits: 54.1 E(85289): 2.3e-07
Smith-Waterman score: 361; 41.2% identity (58.2% similar) in 182 aa overlap (18-184:81-257)

                            10        20        30        40       
pF1KB8              MFLSPGEGPATEGGGLGPGEEAPKKKHRRNRTTFTTYQLHQLERAFE
                                     :.    :.:.:: :::::. ::..:::.: 
NP_005 ALGSSNCALGALRDHQPAPYSAVPYKFFPEPSGLHEKRKQRRIRTTFTSAQLKELERVFA
               60        70        80        90       100       110

        50        60        70        80        90       100       
pF1KB8 ASHYPDVYSREELAAKVHLPEVRVQVWFQNRRAKWRRQERLESGSGAVAAPRLPEAPAL-
        .::::.:.::::: :. : :.::::::::::::.:.:::  :..::..:    .. :  
NP_005 ETHYPDIYTREELALKIDLTEARVQVWFQNRRAKFRKQERAASAKGAAGAAGAKKGEARC
              120       130       140       150       160       170

                 110        120          130        140       150  
pF1KB8 ---------PFARP-PAMSLPLEPWLGPG---PPAVPG-LPRLLGPGPGLQASFGPHAFA
                    : :  .  : :  .::   :   :. ::  :: :::   . ::. . 
NP_005 SSEDDDSKESTCSPTPDSTASLPPPPAPGLASPRLSPSPLPVALGSGPG--PGPGPQPLK
              180       190       200       210         220        

            160       170       180                               
pF1KB8 PTFADGFALEEASLRLLAKEHAQALDRAWPPA                           
        ..  : :   ..        :  : .:: ::                           
NP_005 GALWAGVAGGGGG---GPGAGAAELLKAWQPAESGPGPFSGVLSSFHRKPGPALKTNLF
      230       240          250       260       270       280    




184 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Tue Nov  8 04:20:32 2016 done: Tue Nov  8 04:20:33 2016
 Total Scan time:  6.860 Total Display time: -0.020

Function used was FASTA [36.3.4 Apr, 2011]
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