(Linear) (Six-base) MAPSORT of: KIEE9550.seq Check: 9479 from: 1 to: 1194 KIEE9550.orf With 182 enzymes: SgfI * December 27, 2011 16:42 .. AarI CACCTGCnnnn'nnnn_ Cuts at: 0 667 732 1194 Size: 667 65 462 Fragments arranged by size: 667 462 65 AflII C'TTAA_G Cuts at: 0 910 1194 Size: 910 284 AflIII A'CryG_T Cuts at: 0 29 385 1194 Size: 29 356 809 Fragments arranged by size: 809 356 29 AleI CACnn'nnGTG Cuts at: 0 262 1194 Size: 262 932 AlwNI CAG_nnn'CTG Cuts at: 0 497 747 861 1194 Size: 497 250 114 333 Fragments arranged by size: 497 333 250 114 ApaI G_GGCC'C Cuts at: 0 832 868 1194 Size: 832 36 326 Fragments arranged by size: 832 326 36 AvaI C'yCGr_G Cuts at: 0 66 553 1194 Size: 66 487 641 Fragments arranged by size: 641 487 66 BanI G'GyrC_C Cuts at: 0 42 76 763 881 1194 Size: 42 34 687 118 313 Fragments arranged by size: 687 313 118 42 34 BanII G_rGCy'C Cuts at: 0 832 868 877 924 982 1194 Size: 832 36 9 47 58 212 Fragments arranged by size: 832 212 58 47 36 9 BbeI G_GCGC'C Cuts at: 0 80 767 1194 Size: 80 687 427 Fragments arranged by size: 687 427 80 BbvCI CC'TCA_GC Cuts at: 0 490 1194 Size: 490 704 BglI GCCn_nnn'nGGC Cuts at: 0 250 692 772 872 1194 Size: 250 442 80 100 322 Fragments arranged by size: 442 322 250 100 80 Bme1580I G_kGCm'C Cuts at: 0 45 832 868 1194 Size: 45 787 36 326 Fragments arranged by size: 787 326 45 36 BmgBI CAC'GTC Cuts at: 0 264 1194 Size: 264 930 BmrI ACTGGGnnnn_n' Cuts at: 0 91 1194 Size: 91 1103 BpmI CTGGAGnnnnnnnnnnnnnn_nn' Cuts at: 0 619 1194 Size: 619 575 Bpu10I CC'TnA_GC Cuts at: 0 490 1194 Size: 490 704 BsaI GGTCTCn'nnnn_ Cuts at: 0 375 786 1194 Size: 375 411 408 Fragments arranged by size: 411 408 375 BsaAI yAC'GTr Cuts at: 0 386 426 1194 Size: 386 40 768 Fragments arranged by size: 768 386 40 BsaHI Gr'CG_yC Cuts at: 0 77 122 764 1194 Size: 77 45 642 430 Fragments arranged by size: 642 430 77 45 BsaWI w'CCGG_w Cuts at: 0 19 1194 Size: 19 1175 BsaXI ACnnnnnCTCCnnnnnnn_nnn' Cuts at: 0 928 958 1194 Size: 928 30 236 Fragments arranged by size: 928 236 30 BseYI C'CCAG_C Cuts at: 0 162 320 327 586 824 861 1194 Size: 162 158 7 259 238 37 333 Fragments arranged by size: 333 259 238 162 158 37 7 BsgI GTGCAGnnnnnnnnnnnnnn_nn' Cuts at: 0 397 436 523 1072 1194 Size: 397 39 87 549 122 Fragments arranged by size: 549 397 122 87 39 BsiEI CG_ry'CG Cuts at: 0 800 1194 Size: 800 394 BsiHKAI G_wGCw'C Cuts at: 0 533 1194 Size: 533 661 Bsp1286I G_dGCh'C Cuts at: 0 45 533 832 868 877 924 982 1194 Size: 45 488 299 36 9 47 58 212 Fragments arranged by size: 488 299 212 58 47 45 36 9 BspEI T'CCGG_A Cuts at: 0 19 1194 Size: 19 1175 BspMI ACCTGCnnnn'nnnn_ Cuts at: 0 357 632 647 667 732 1194 Size: 357 275 15 20 65 462 Fragments arranged by size: 462 357 275 65 20 15 BsrBI CCG'CTC Cuts at: 0 138 1194 Size: 138 1056 BsrFI r'CCGG_y Cuts at: 0 45 525 1046 1194 Size: 45 480 521 148 Fragments arranged by size: 521 480 148 45 BsrGI T'GTAC_A Cuts at: 0 617 1194 Size: 617 577 BssHII G'CGCG_C Cuts at: 0 444 561 603 756 1019 1153 1194 Size: 444 117 42 153 263 134 41 Fragments arranged by size: 444 263 153 134 117 42 41 BssSI C'ACGA_G Cuts at: 0 130 1194 Size: 130 1064 BstXI CCAn_nnnn'nTGG Cuts at: 0 411 1194 Size: 411 783 BtgI C'CryG_G Cuts at: 0 8 109 116 257 800 869 1194 Size: 8 101 7 141 543 69 325 Fragments arranged by size: 543 325 141 101 69 8 7 BtgZI GCGATGnnnnnnnnnn'nnnn_ Cuts at: 0 225 1194 Size: 225 969 BtsI GCAGTG_nn' Cuts at: 0 579 924 1146 1194 Size: 579 345 222 48 Fragments arranged by size: 579 345 222 48 DraIII CAC_nnn'GTG Cuts at: 0 9 1194 Size: 9 1185 DrdI GACnn_nn'nnGTC Cuts at: 0 97 1194 Size: 97 1097 EaeI y'GGCC_r Cuts at: 0 47 254 674 797 1148 1194 Size: 47 207 420 123 351 46 Fragments arranged by size: 420 351 207 123 47 46 EagI C'GGCC_G Cuts at: 0 797 1194 Size: 797 397 EarI CTCTTCn'nnn_ Cuts at: 0 145 817 1194 Size: 145 672 377 Fragments arranged by size: 672 377 145 EciI GGCGGAnnnnnnnnn_nn' Cuts at: 0 991 1194 Size: 991 203 Eco57MI CTGrAGnnnnnnnnnnnnnn_nn' Cuts at: 0 619 1194 Size: 619 575 EcoNI CCTnn'n_nnAGG Cuts at: 0 1174 1194 Size: 1174 20 EcoO109I rG'GnC_Cy Cuts at: 0 828 829 865 1100 1194 Size: 828 1 36 235 94 Fragments arranged by size: 828 235 94 36 1 HaeII r_GCGC'y Cuts at: 0 80 154 478 634 731 767 862 1194 Size: 80 74 324 156 97 36 95 332 Fragments arranged by size: 332 324 156 97 95 80 74 36 Hin4I GAynnnnnvTCnnnnnnnn_nnnnn' Cuts at: 0 906 938 1194 Size: 906 32 256 Fragments arranged by size: 906 256 32 HincII GTy'rAC Cuts at: 0 354 1194 Size: 354 840 KasI G'GCGC_C Cuts at: 0 76 763 1194 Size: 76 687 431 Fragments arranged by size: 687 431 76 MluI A'CGCG_T Cuts at: 0 29 1194 Size: 29 1165 MmeI TCCrACnnnnnnnnnnnnnnnnnn_nn' Cuts at: 0 1014 1194 Size: 1014 180 MslI CAynn'nnrTG Cuts at: 0 262 409 1194 Size: 262 147 785 Fragments arranged by size: 785 262 147 MspA1I CmG'CkG Cuts at: 0 111 312 419 648 840 871 960 1194 Size: 111 201 107 229 192 31 89 234 Fragments arranged by size: 234 229 201 192 111 107 89 31 NaeI GCC'GGC Cuts at: 0 1048 1194 Size: 1048 146 NarI GG'CG_CC Cuts at: 0 77 764 1194 Size: 77 687 430 Fragments arranged by size: 687 430 77 NgoMIV G'CCGG_C Cuts at: 0 1046 1194 Size: 1046 148 NspI r_CATG'y Cuts at: 0 933 1194 Size: 933 261 PmlI CAC'GTG Cuts at: 0 386 1194 Size: 386 808 PpuMI rG'GwC_Cy Cuts at: 0 1100 1194 Size: 1100 94 PspOMI G'GGCC_C Cuts at: 0 828 864 1194 Size: 828 36 330 Fragments arranged by size: 828 330 36 PstI C_TGCA'G Cuts at: 0 574 737 857 1194 Size: 574 163 120 337 Fragments arranged by size: 574 337 163 120 PvuII CAG'CTG Cuts at: 0 840 1194 Size: 840 354 RsrII CG'GwC_CG Cuts at: 0 221 1194 Size: 221 973 SacII CC_GC'GG Cuts at: 0 112 872 1194 Size: 112 760 322 Fragments arranged by size: 760 322 112 SanDI GG'GwC_CC Cuts at: 0 1100 1194 Size: 1100 94 SapI GCTCTTCn'nnn_ Cuts at: 0 145 817 1194 Size: 145 672 377 Fragments arranged by size: 672 377 145 SbfI CC_TGCA'GG Cuts at: 0 737 1194 Size: 737 457 SfcI C'TryA_G Cuts at: 0 570 733 853 936 1194 Size: 570 163 120 83 258 Fragments arranged by size: 570 258 163 120 83 SfoI GGC'GCC Cuts at: 0 78 765 1194 Size: 78 687 429 Fragments arranged by size: 687 429 78 SgrAI Cr'CCGG_yG Cuts at: 0 525 1194 Size: 525 669 SmaI CCC'GGG Cuts at: 0 68 555 1194 Size: 68 487 639 Fragments arranged by size: 639 487 68 SmlI C'TyrA_G Cuts at: 0 910 1194 Size: 910 284 SrfI GCCC'GGGC Cuts at: 0 68 1194 Size: 68 1126 StuI AGG'CCT Cuts at: 0 580 997 1194 Size: 580 417 197 Fragments arranged by size: 580 417 197 StyI C'CwwG_G Cuts at: 0 776 1194 Size: 776 418 TaqII GACCGAnnnnnnnnn_nn' Cuts at: 0 312 899 1194 Size: 312 587 295 Fragments arranged by size: 587 312 295 TatI w'GTAC_w Cuts at: 0 617 1194 Size: 617 577 TstI CACnnnnnnTCCnnnnnnn_nnnnn' Cuts at: 0 916 948 1194 Size: 916 32 246 Fragments arranged by size: 916 246 32 XcmI CCAnnnn_n'nnnnTGG Cuts at: 0 594 1194 Size: 594 600 XmaI C'CCGG_G Cuts at: 0 66 553 1194 Size: 66 487 641 Fragments arranged by size: 641 487 66 Enzymes that do cut: AarI AflII AflIII AleI AlwNI ApaI AvaI BanI BanII BbeI BbvCI BglI Bme1580I BmgBI BmrI BpmI Bpu10I BsaI BsaAI BsaHI BsaWI BsaXI BseYI BsgI BsiEI BsiHKAI Bsp1286I BspEI BspMI BsrBI BsrFI BsrGI BssHII BssSI BstXI BtgI BtgZI BtsI DraIII DrdI EaeI EagI EarI EciI Eco57MI EcoNI EcoO109I HaeII Hin4I HincII KasI MluI MmeI MslI MspA1I NaeI NarI NgoMIV NspI PmlI PpuMI PspOMI PstI PvuII RsrII SacII SanDI SapI SbfI SfcI SfoI SgrAI SmaI SmlI SrfI StuI StyI TaqII TatI TstI XcmI XmaI Enzymes that do not cut: AatII AccI Acc65I AclI AcuI AfeI AgeI AhdI AlfI AloI ApaLI ApoI AscI AseI AsiSI AvrII BaeI BamHI BbsI BcgI BciVI BclI BfrBI BglII BlpI BmtI BplI BpuEI BsaBI BseRI BsiWI BsmI BsmBI BspHI BsrDI BstAPI BstBI BstEII BstYI BstZ17I Bsu36I ClaI CspCI DraI EcoICRI EcoRI EcoRV FalI FseI FspI FspAI HindIII HpaI KpnI MfeI MscI NcoI NdeI NheI NotI NruI NsiI PacI PasI PciI PflMI PfoI PmeI PpiI PshAI PsiI PspXI PsrI PvuI SacI SalI ScaI SexAI SfiI SgfI SnaBI SpeI SphI SspI SwaI Tth111I XbaI XhoI XmnI ZraI