FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE3973, 434 aa 1>>>pF1KE3973 434 - 434 aa - 434 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.8594+/-0.000917; mu= 14.0326+/- 0.055 mean_var=63.9741+/-13.182, 0's: 0 Z-trim(105.1): 22 B-trim: 23 in 1/50 Lambda= 0.160351 statistics sampled from 8248 (8261) to 8248 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.634), E-opt: 0.2 (0.254), width: 16 Scan time: 2.630 The best scores are: opt bits E(32554) CCDS45884.1 FBXO15 gene_id:201456|Hs108|chr18 ( 510) 2976 697.3 8.7e-201 >>CCDS45884.1 FBXO15 gene_id:201456|Hs108|chr18 (510 aa) initn: 2976 init1: 2976 opt: 2976 Z-score: 3718.2 bits: 697.3 E(32554): 8.7e-201 Smith-Waterman score: 2976; 100.0% identity (100.0% similar) in 434 aa overlap (1-434:77-510) 10 20 30 pF1KE3 MPSEILLKIFSYLDAVSLLCTGCVSRRFYH :::::::::::::::::::::::::::::: CCDS45 SAGSAALRCHAGGGQHWESSFSCCSGFLDGMPSEILLKIFSYLDAVSLLCTGCVSRRFYH 50 60 70 80 90 100 40 50 60 70 80 90 pF1KE3 LANDNFIWIGIYSTAFSPARSNWKFNSVEKIAMSMSFLSVQDKEAGYWKKEYITKQIASV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 LANDNFIWIGIYSTAFSPARSNWKFNSVEKIAMSMSFLSVQDKEAGYWKKEYITKQIASV 110 120 130 140 150 160 100 110 120 130 140 150 pF1KE3 KAALADILKPVNPYTGLPVKTKEALRIFGLGWAIILKEKGGKEYIMEHVDLSINDTSVTV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 KAALADILKPVNPYTGLPVKTKEALRIFGLGWAIILKEKGGKEYIMEHVDLSINDTSVTV 170 180 190 200 210 220 160 170 180 190 200 210 pF1KE3 IWYGKKWPCLASLSTLDLCGMTPVFTDWYKTPTKHRLRWHSLIAKYNLSHLTISTMIGCD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 IWYGKKWPCLASLSTLDLCGMTPVFTDWYKTPTKHRLRWHSLIAKYNLSHLTISTMIGCD 230 240 250 260 270 280 220 230 240 250 260 270 pF1KE3 RLIRIFCLHPGLLVGVWKKEEELAFVMANLHFHHLVERSTLGSATIPYELPPHSPFLDDS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 RLIRIFCLHPGLLVGVWKKEEELAFVMANLHFHHLVERSTLGSATIPYELPPHSPFLDDS 290 300 310 320 330 340 280 290 300 310 320 330 pF1KE3 PEYGLHGYQLHVDLHSGGVFYLCGTFRNLFTKRGNIENGHVKLIVIHLKNNREHLPLIGK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 PEYGLHGYQLHVDLHSGGVFYLCGTFRNLFTKRGNIENGHVKLIVIHLKNNREHLPLIGK 350 360 370 380 390 400 340 350 360 370 380 390 pF1KE3 VGLSWKTDIFDGCIKSCSMMDVTLLDEHGKPFWCFSSPVCLRSPATPSDSSSFLGQTYNV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 VGLSWKTDIFDGCIKSCSMMDVTLLDEHGKPFWCFSSPVCLRSPATPSDSSSFLGQTYNV 410 420 430 440 450 460 400 410 420 430 pF1KE3 DYVDAEGRVHVELVWIRETEEYLIVNLVLYLSIAKINHWFGTEY :::::::::::::::::::::::::::::::::::::::::::: CCDS45 DYVDAEGRVHVELVWIRETEEYLIVNLVLYLSIAKINHWFGTEY 470 480 490 500 510 434 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 19:17:10 2016 done: Mon Nov 7 19:17:11 2016 Total Scan time: 2.630 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]