FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE5084, 54 aa 1>>>pF1KE5084 54 - 54 aa - 54 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 4.4468+/-0.000389; mu= 10.2519+/- 0.024 mean_var=49.8443+/- 9.911, 0's: 0 Z-trim(118.2): 1 B-trim: 89 in 1/50 Lambda= 0.181663 statistics sampled from 19089 (19090) to 19089 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.909), E-opt: 0.2 (0.586), width: 16 Scan time: 1.060 The best scores are: opt bits E(32554) CCDS11975.1 PMAIP1 gene_id:5366|Hs108|chr18 ( 54) 360 100.1 6.9e-23 >>CCDS11975.1 PMAIP1 gene_id:5366|Hs108|chr18 (54 aa) initn: 360 init1: 360 opt: 360 Z-score: 524.4 bits: 100.1 E(32554): 6.9e-23 Smith-Waterman score: 360; 100.0% identity (100.0% similar) in 54 aa overlap (1-54:1-54) 10 20 30 40 50 pF1KE5 MPGKKARKNAQPSPARAPAELEVECATQLRRFGDKLNFRQKLLNLISKLFCSGT :::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 MPGKKARKNAQPSPARAPAELEVECATQLRRFGDKLNFRQKLLNLISKLFCSGT 10 20 30 40 50 54 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 04:52:28 2016 done: Tue Nov 8 04:52:28 2016 Total Scan time: 1.060 Total Display time: -0.030 Function used was FASTA [36.3.4 Apr, 2011]