FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6618, 297 aa 1>>>pF1KE6618 297 - 297 aa - 297 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.7642+/-0.0003; mu= 15.6828+/- 0.019 mean_var=101.6469+/-20.097, 0's: 0 Z-trim(119.8): 12 B-trim: 36 in 1/51 Lambda= 0.127212 statistics sampled from 34188 (34200) to 34188 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.755), E-opt: 0.2 (0.401), width: 16 Scan time: 6.500 The best scores are: opt bits E(85289) NP_057444 (OMIM: 220110,612958) translational acti ( 297) 1973 371.8 9.1e-103 >>NP_057444 (OMIM: 220110,612958) translational activato (297 aa) initn: 1973 init1: 1973 opt: 1973 Z-score: 1966.0 bits: 371.8 E(85289): 9.1e-103 Smith-Waterman score: 1973; 100.0% identity (100.0% similar) in 297 aa overlap (1-297:1-297) 10 20 30 40 50 60 pF1KE6 MSAWAAASLSRAAARCLLARGPGVRAAPPRDPRPSHPEPRGCGAAPGRTLHFTAAVPAGH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_057 MSAWAAASLSRAAARCLLARGPGVRAAPPRDPRPSHPEPRGCGAAPGRTLHFTAAVPAGH 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 NKWSKVRHIKGPKDVERSRIFSKLCLNIRLAVKEGGPNPEHNSNLANILEVCRSKHMPKS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_057 NKWSKVRHIKGPKDVERSRIFSKLCLNIRLAVKEGGPNPEHNSNLANILEVCRSKHMPKS 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 TIETALKMEKSKDTYLLYEGRGPGGSSLLIEALSNSSHKCQADIRHILNKNGGVMAVGAR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_057 TIETALKMEKSKDTYLLYEGRGPGGSSLLIEALSNSSHKCQADIRHILNKNGGVMAVGAR 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE6 HSFDKKGVIVVEVEDREKKAVNLERALEMAIEAGAEDVKETEDEEERNVFKFICDASSLH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_057 HSFDKKGVIVVEVEDREKKAVNLERALEMAIEAGAEDVKETEDEEERNVFKFICDASSLH 190 200 210 220 230 240 250 260 270 280 290 pF1KE6 QVRKKLDSLGLCSVSCALEFIPNSKVQLAEPDLEQAAHLIQALSNHEDVIHVYDNIE ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_057 QVRKKLDSLGLCSVSCALEFIPNSKVQLAEPDLEQAAHLIQALSNHEDVIHVYDNIE 250 260 270 280 290 297 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 14:49:43 2016 done: Tue Nov 8 14:49:44 2016 Total Scan time: 6.500 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]