FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE3144, 354 aa 1>>>pF1KE3144 354 - 354 aa - 354 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 7.0094+/-0.000775; mu= 10.9308+/- 0.047 mean_var=169.1304+/-34.226, 0's: 0 Z-trim(115.1): 56 B-trim: 0 in 0/52 Lambda= 0.098620 statistics sampled from 15559 (15616) to 15559 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.796), E-opt: 0.2 (0.48), width: 16 Scan time: 3.260 The best scores are: opt bits E(32554) CCDS11540.2 UBE2Z gene_id:65264|Hs108|chr17 ( 354) 2478 364.0 1.1e-100 CCDS33175.2 BIRC6 gene_id:57448|Hs108|chr2 (4857) 406 70.4 3.7e-11 >>CCDS11540.2 UBE2Z gene_id:65264|Hs108|chr17 (354 aa) initn: 2478 init1: 2478 opt: 2478 Z-score: 1921.1 bits: 364.0 E(32554): 1.1e-100 Smith-Waterman score: 2478; 100.0% identity (100.0% similar) in 354 aa overlap (1-354:1-354) 10 20 30 40 50 60 pF1KE3 MAESPTEEAATAGAGAAGPGASSVAGVVGVSGSGGGFGPPFLPDVWAAAAAAGGAGGPGS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 MAESPTEEAATAGAGAAGPGASSVAGVVGVSGSGGGFGPPFLPDVWAAAAAAGGAGGPGS 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 GLAPLPGLPPSAAAHGAALLSHWDPTLSSDWDGERTAPQCLLRIKRDIMSIYKEPPPGMF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 GLAPLPGLPPSAAAHGAALLSHWDPTLSSDWDGERTAPQCLLRIKRDIMSIYKEPPPGMF 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 VVPDTVDMTKIHALITGPFDTPYEGGFFLFVFRCPPDYPIHPPRVKLMTTGNNTVRFNPN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 VVPDTVDMTKIHALITGPFDTPYEGGFFLFVFRCPPDYPIHPPRVKLMTTGNNTVRFNPN 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 FYRNGKVCLSILGTWTGPAWSPAQSISSVLISIQSLMTENPYHNEPGFEQERHPGDSKNY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 FYRNGKVCLSILGTWTGPAWSPAQSISSVLISIQSLMTENPYHNEPGFEQERHPGDSKNY 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE3 NECIRHETIRVAVCDMMEGKCPCPEPLRGVMEKSFLEYYDFYEVACKDRLHLQGQTMQDP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 NECIRHETIRVAVCDMMEGKCPCPEPLRGVMEKSFLEYYDFYEVACKDRLHLQGQTMQDP 250 260 270 280 290 300 310 320 330 340 350 pF1KE3 FGEKRGHFDYQSLLMRLGLIRQKVLERLHNENAEMDSDSSSSGTETDLHGSLRV :::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 FGEKRGHFDYQSLLMRLGLIRQKVLERLHNENAEMDSDSSSSGTETDLHGSLRV 310 320 330 340 350 >>CCDS33175.2 BIRC6 gene_id:57448|Hs108|chr2 (4857 aa) initn: 467 init1: 290 opt: 406 Z-score: 313.8 bits: 70.4 E(32554): 3.7e-11 Smith-Waterman score: 446; 35.0% identity (63.4% similar) in 254 aa overlap (119-353:4597-4844) 90 100 110 120 130 140 pF1KE3 SDWDGERTAPQCLLRIKRDIMSIYKEPPPGMFVVPDTVDMTKIHALITGPFDTPYEGGFF .:: : . ...::::: :::: .: : CCDS33 NDANSAARARRLAQEAVTLSTSLPLSSSSSVFVRCDEERLDIMKVLITGPADTPYANGCF 4570 4580 4590 4600 4610 4620 150 160 170 180 190 200 pF1KE3 LFVFRCPPDYPIHPPRVKLMTTGNNTVRFNPNFYRNGKVCLSILGTWTG-PA--WSP-AQ : : ::: :: :.: :::...::::::.: .::::::::.:: : : :.: .. CCDS33 EFDVYFPQDYPSSPPLVNLETTGGHSVRFNPNLYNDGKVCLSILNTWHGRPEEKWNPQTS 4630 4640 4650 4660 4670 4680 210 220 230 240 250 pF1KE3 SISSVLISIQSL-MTENPYHNEPGFEQERH-PG---DSKNYNECIRHETIRVAVCDMMEG :. .::.:.::: .. .:: ::::.:. : :. .:..:. ::. :.. :. ..... CCDS33 SFLQVLVSVQSLILVAEPYFNEPGYERSRGTPSGTQSSREYDGNIRQATVKWAMLEQIRN 4690 4700 4710 4720 4730 4740 260 270 280 290 300 310 pF1KE3 KCPCPEPLRGVMEKSFLEYYDFYEVA--CKDRL-HLQGQTMQDPFGEKRGHFDYQSLLMR :: .. :..: : : :. :.. . .: . . :. .: .: . CCDS33 PSPC---FKEVIHKHF--YLKRVEIMAQCEEWIADIQQYSSDKRVGRTMSHHA-AALKRH 4750 4760 4770 4780 4790 4800 320 330 340 350 pF1KE3 LGLIRQKVLERLHNENAEMDSD-------SSSSGTETDLHGSLRV . .:...:. :. . :.: ..... :: .: ... CCDS33 TAQLREELLKLPCPEGLDPDTDDAPEVCRATTGAEETLMHDQVKPSSSKELPSDFQL 4810 4820 4830 4840 4850 354 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 03:27:25 2016 done: Sun Nov 6 03:27:25 2016 Total Scan time: 3.260 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]