FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KB8893, 217 aa 1>>>pF1KB8893 217 - 217 aa - 217 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.3824+/-0.000339; mu= 10.5481+/- 0.021 mean_var=147.3835+/-31.000, 0's: 0 Z-trim(119.8): 246 B-trim: 712 in 2/54 Lambda= 0.105645 statistics sampled from 33989 (34292) to 33989 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.749), E-opt: 0.2 (0.402), width: 16 Scan time: 5.410 The best scores are: opt bits E(85289) NP_004493 (OMIM: 142962) homeobox protein Hox-B7 [ ( 217) 1466 234.3 1.2e-61 NP_008827 (OMIM: 142950) homeobox protein Hox-A7 [ ( 230) 810 134.3 1.6e-31 XP_005257341 (OMIM: 142961) PREDICTED: homeobox pr ( 224) 472 82.8 5e-16 XP_005257340 (OMIM: 142961) PREDICTED: homeobox pr ( 224) 472 82.8 5e-16 NP_061825 (OMIM: 142961) homeobox protein Hox-B6 [ ( 224) 472 82.8 5e-16 XP_011523029 (OMIM: 142961) PREDICTED: homeobox pr ( 288) 472 82.9 5.9e-16 NP_076919 (OMIM: 142951) homeobox protein Hox-A6 [ ( 233) 455 80.2 3.1e-15 NP_710160 (OMIM: 142972) homeobox protein Hox-C6 i ( 153) 432 76.5 2.6e-14 NP_061975 (OMIM: 142952) homeobox protein Hox-A5 [ ( 270) 435 77.2 2.8e-14 NP_004494 (OMIM: 142972) homeobox protein Hox-C6 i ( 235) 432 76.7 3.5e-14 NP_002138 (OMIM: 142960) homeobox protein Hox-B5 [ ( 269) 423 75.4 1e-13 XP_005257343 (OMIM: 142963) PREDICTED: homeobox pr ( 242) 420 74.9 1.3e-13 NP_073149 (OMIM: 142970) homeobox protein Hox-C8 [ ( 242) 417 74.4 1.8e-13 NP_001186675 (OMIM: 142985) homeobox protein Hox-D ( 289) 418 74.7 1.8e-13 NP_076921 (OMIM: 142963) homeobox protein Hox-B8 [ ( 243) 410 73.4 3.7e-13 XP_016880053 (OMIM: 142963) PREDICTED: homeobox pr ( 243) 410 73.4 3.7e-13 NP_062458 (OMIM: 142985) homeobox protein Hox-D8 i ( 290) 406 72.8 6.3e-13 NP_001186676 (OMIM: 142985) homeobox protein Hox-D ( 106) 393 70.4 1.3e-12 NP_061826 (OMIM: 142973) homeobox protein Hox-C5 [ ( 222) 396 71.2 1.5e-12 NP_055436 (OMIM: 142981) homeobox protein Hox-D4 [ ( 255) 391 70.5 2.8e-12 NP_055435 (OMIM: 142974) homeobox protein Hox-C4 [ ( 264) 376 68.2 1.4e-11 NP_705897 (OMIM: 142974) homeobox protein Hox-C4 [ ( 264) 376 68.2 1.4e-11 NP_002132 (OMIM: 142953) homeobox protein Hox-A4 [ ( 320) 366 66.8 4.6e-11 NP_076920 (OMIM: 142965) homeobox protein Hox-B4 [ ( 251) 362 66.1 6e-11 NP_006726 (OMIM: 604685,612290) homeobox protein H ( 376) 312 58.6 1.5e-08 NP_076922 (OMIM: 142964) homeobox protein Hox-B9 [ ( 250) 306 57.5 2.2e-08 NP_005915 (OMIM: 600535) homeobox protein MOX-2 [H ( 304) 307 57.8 2.3e-08 NP_008828 (OMIM: 142971) homeobox protein Hox-C9 [ ( 260) 304 57.2 2.8e-08 XP_005246566 (OMIM: 142980) PREDICTED: homeobox pr ( 432) 307 57.9 2.9e-08 NP_008829 (OMIM: 142980) homeobox protein Hox-D3 [ ( 432) 307 57.9 2.9e-08 XP_011509367 (OMIM: 142980) PREDICTED: homeobox pr ( 432) 307 57.9 2.9e-08 XP_006712540 (OMIM: 142980) PREDICTED: homeobox pr ( 432) 307 57.9 2.9e-08 XP_005246570 (OMIM: 142980) PREDICTED: homeobox pr ( 432) 307 57.9 2.9e-08 XP_011509368 (OMIM: 142980) PREDICTED: homeobox pr ( 432) 307 57.9 2.9e-08 XP_005246567 (OMIM: 142980) PREDICTED: homeobox pr ( 432) 307 57.9 2.9e-08 XP_005246568 (OMIM: 142980) PREDICTED: homeobox pr ( 432) 307 57.9 2.9e-08 NP_005506 (OMIM: 142994,176450) motor neuron and p ( 401) 305 57.6 3.4e-08 NP_002135 (OMIM: 142968,614744) homeobox protein H ( 301) 299 56.6 5.3e-08 NP_000200 (OMIM: 125853,260370,600733,606176,60639 ( 283) 297 56.2 6.2e-08 NP_055028 (OMIM: 142982) homeobox protein Hox-D9 [ ( 352) 295 56.0 8.9e-08 NP_001317252 (OMIM: 142966) homeobox protein Hox-B ( 299) 287 54.7 1.9e-07 NP_109377 (OMIM: 142954) homeobox protein Hox-A3 i ( 443) 289 55.2 2e-07 XP_006715778 (OMIM: 142954) PREDICTED: homeobox pr ( 443) 289 55.2 2e-07 XP_011513645 (OMIM: 142954) PREDICTED: homeobox pr ( 443) 289 55.2 2e-07 XP_005249788 (OMIM: 142954) PREDICTED: homeobox pr ( 443) 289 55.2 2e-07 XP_005249787 (OMIM: 142954) PREDICTED: homeobox pr ( 443) 289 55.2 2e-07 XP_005249789 (OMIM: 142954) PREDICTED: homeobox pr ( 443) 289 55.2 2e-07 NP_705895 (OMIM: 142954) homeobox protein Hox-A3 i ( 443) 289 55.2 2e-07 NP_001317251 (OMIM: 142966) homeobox protein Hox-B ( 358) 287 54.8 2.1e-07 XP_011523028 (OMIM: 142966) PREDICTED: homeobox pr ( 358) 287 54.8 2.1e-07 >>NP_004493 (OMIM: 142962) homeobox protein Hox-B7 [Homo (217 aa) initn: 1466 init1: 1466 opt: 1466 Z-score: 1227.7 bits: 234.3 E(85289): 1.2e-61 Smith-Waterman score: 1466; 99.5% identity (100.0% similar) in 217 aa overlap (1-217:1-217) 10 20 30 40 50 60 pF1KB8 MSSLYYANALFSKYPASSSVFATGAFPEQTSCAFASNPQRPGYGAGSGASFAASMQGLYP ::::::::.::::::::::::::::::::::::::::::::::::::::::::::::::: NP_004 MSSLYYANTLFSKYPASSSVFATGAFPEQTSCAFASNPQRPGYGAGSGASFAASMQGLYP 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB8 GGGGMAGQSAAGVYAAGYGLEPSSFNMHCAPFEQNLSGVCPGDSAKAAGAKEQRDSDLAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_004 GGGGMAGQSAAGVYAAGYGLEPSSFNMHCAPFEQNLSGVCPGDSAKAAGAKEQRDSDLAA 70 80 90 100 110 120 130 140 150 160 170 180 pF1KB8 ESNFRIYPWMRSSGTDRKRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHTLCLTERQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_004 ESNFRIYPWMRSSGTDRKRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHTLCLTERQ 130 140 150 160 170 180 190 200 210 pF1KB8 IKIWFQNRRMKWKKENKTAGPGTTGQDRAEAEEEEEE ::::::::::::::::::::::::::::::::::::: NP_004 IKIWFQNRRMKWKKENKTAGPGTTGQDRAEAEEEEEE 190 200 210 >>NP_008827 (OMIM: 142950) homeobox protein Hox-A7 [Homo (230 aa) initn: 791 init1: 586 opt: 810 Z-score: 687.0 bits: 134.3 E(85289): 1.6e-31 Smith-Waterman score: 817; 58.8% identity (76.4% similar) in 233 aa overlap (1-217:1-224) 10 20 30 40 50 60 pF1KB8 MSSLYYANALFSKYPASSSVFATGAFPEQTSCAFASNPQRPGYGAGSGASFAASMQGLYP ::: ::.::::::: :..:.: .. : :::.:: : :: :::::.:: ::... ::: NP_008 MSSSYYVNALFSKYTAGASLFQNA---EPTSCSFAPNSQRSGYGAGAGA-FASTVPGLYN 10 20 30 40 50 70 80 90 100 110 pF1KB8 GGGGMAGQSAAGVYAAGYGLEPSSF-NMHCAPFEQNLSGVCPGDSAKAAGAKEQRDS-DL .. . :: .:.:::: ... :. :: ..::. :.: .: ::.: : .. . NP_008 VNSPLY-QSP---FASGYGLGADAYGNLPCASYDQNIPGLC-SDLAKGACDKTDEGALHG 60 70 80 90 100 110 120 130 140 150 160 170 pF1KB8 AAESNFRIYPWMRSSGTDRKRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHTLCLTE :::.:::::::::::: ::::::::::::::::::::::.::::::::::::::.::::: NP_008 AAEANFRIYPWMRSSGPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTE 120 130 140 150 160 170 180 190 200 210 pF1KB8 RQIKIWFQNRRMKWKKENKTAGP--------------GTTGQDRAEAEEEEEE :::::::::::::::::.: :: .:.. :.:. :...:: NP_008 RQIKIWFQNRRMKWKKEHKDEGPTAAAAPEGAVPSAAATAAADKADEEDDDEEEEDEEE 180 190 200 210 220 230 >>XP_005257341 (OMIM: 142961) PREDICTED: homeobox protei (224 aa) initn: 481 init1: 393 opt: 472 Z-score: 408.8 bits: 82.8 E(85289): 5e-16 Smith-Waterman score: 505; 45.1% identity (63.4% similar) in 235 aa overlap (1-216:1-222) 10 20 30 40 50 pF1KB8 MSSLYYANALFSKYPASSSVFATGAFPEQTSCAFASNPQR--PG-YGAGSGASFAASMQG ::: :..:. : ::.. : .: .: ..: .: : :. :: : : . . . .. XP_005 MSS-YFVNSTFPVTLASGQESFLGQLPLYSS-GYA-DPLRHYPAPYGPGPGQDKGFATSS 10 20 30 40 50 60 70 80 90 100 pF1KB8 LYPGGGGMAGQSAA---GVYAAGYGLEPSSFNMHCA----PFE-QNLSGVCPGDSAKAAG :: .:: :..: : : : . :. . : ::. . .. : :.. . XP_005 YYPPAGGGYGRAAPCDYGPAPAFYREKESACALSGADEQPPFHPEPRKSDCAQDKSVFGE 60 70 80 90 100 110 110 120 130 140 150 160 pF1KB8 AKEQRDSDLAAESNFRIYPWMR--------SSGTDRKRGRQTYTRYQTLELEKEFHYNRY ..::. : .::::. : : . .::::::::::::::::::::::: XP_005 TEEQKCST-------PVYPWMQRMNSCNSSSFGPSGRRGRQTYTRYQTLELEKEFHYNRY 120 130 140 150 160 170 170 180 190 200 210 pF1KB8 LTRRRRIEIAHTLCLTERQIKIWFQNRRMKWKKENKTAGPGTTGQDRAEAEEEEEE :::::::::::.::::::::::::::::::::::.: ...: :: :::.. XP_005 LTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKESKLL---SASQLSAEEEEEKQAE 180 190 200 210 220 >>XP_005257340 (OMIM: 142961) PREDICTED: homeobox protei (224 aa) initn: 481 init1: 393 opt: 472 Z-score: 408.8 bits: 82.8 E(85289): 5e-16 Smith-Waterman score: 505; 45.1% identity (63.4% similar) in 235 aa overlap (1-216:1-222) 10 20 30 40 50 pF1KB8 MSSLYYANALFSKYPASSSVFATGAFPEQTSCAFASNPQR--PG-YGAGSGASFAASMQG ::: :..:. : ::.. : .: .: ..: .: : :. :: : : . . . .. XP_005 MSS-YFVNSTFPVTLASGQESFLGQLPLYSS-GYA-DPLRHYPAPYGPGPGQDKGFATSS 10 20 30 40 50 60 70 80 90 100 pF1KB8 LYPGGGGMAGQSAA---GVYAAGYGLEPSSFNMHCA----PFE-QNLSGVCPGDSAKAAG :: .:: :..: : : : . :. . : ::. . .. : :.. . XP_005 YYPPAGGGYGRAAPCDYGPAPAFYREKESACALSGADEQPPFHPEPRKSDCAQDKSVFGE 60 70 80 90 100 110 110 120 130 140 150 160 pF1KB8 AKEQRDSDLAAESNFRIYPWMR--------SSGTDRKRGRQTYTRYQTLELEKEFHYNRY ..::. : .::::. : : . .::::::::::::::::::::::: XP_005 TEEQKCST-------PVYPWMQRMNSCNSSSFGPSGRRGRQTYTRYQTLELEKEFHYNRY 120 130 140 150 160 170 170 180 190 200 210 pF1KB8 LTRRRRIEIAHTLCLTERQIKIWFQNRRMKWKKENKTAGPGTTGQDRAEAEEEEEE :::::::::::.::::::::::::::::::::::.: ...: :: :::.. XP_005 LTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKESKLL---SASQLSAEEEEEKQAE 180 190 200 210 220 >>NP_061825 (OMIM: 142961) homeobox protein Hox-B6 [Homo (224 aa) initn: 481 init1: 393 opt: 472 Z-score: 408.8 bits: 82.8 E(85289): 5e-16 Smith-Waterman score: 505; 45.1% identity (63.4% similar) in 235 aa overlap (1-216:1-222) 10 20 30 40 50 pF1KB8 MSSLYYANALFSKYPASSSVFATGAFPEQTSCAFASNPQR--PG-YGAGSGASFAASMQG ::: :..:. : ::.. : .: .: ..: .: : :. :: : : . . . .. NP_061 MSS-YFVNSTFPVTLASGQESFLGQLPLYSS-GYA-DPLRHYPAPYGPGPGQDKGFATSS 10 20 30 40 50 60 70 80 90 100 pF1KB8 LYPGGGGMAGQSAA---GVYAAGYGLEPSSFNMHCA----PFE-QNLSGVCPGDSAKAAG :: .:: :..: : : : . :. . : ::. . .. : :.. . NP_061 YYPPAGGGYGRAAPCDYGPAPAFYREKESACALSGADEQPPFHPEPRKSDCAQDKSVFGE 60 70 80 90 100 110 110 120 130 140 150 160 pF1KB8 AKEQRDSDLAAESNFRIYPWMR--------SSGTDRKRGRQTYTRYQTLELEKEFHYNRY ..::. : .::::. : : . .::::::::::::::::::::::: NP_061 TEEQKCST-------PVYPWMQRMNSCNSSSFGPSGRRGRQTYTRYQTLELEKEFHYNRY 120 130 140 150 160 170 170 180 190 200 210 pF1KB8 LTRRRRIEIAHTLCLTERQIKIWFQNRRMKWKKENKTAGPGTTGQDRAEAEEEEEE :::::::::::.::::::::::::::::::::::.: ...: :: :::.. NP_061 LTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKESKLL---SASQLSAEEEEEKQAE 180 190 200 210 220 >>XP_011523029 (OMIM: 142961) PREDICTED: homeobox protei (288 aa) initn: 481 init1: 393 opt: 472 Z-score: 407.4 bits: 82.9 E(85289): 5.9e-16 Smith-Waterman score: 505; 45.1% identity (63.4% similar) in 235 aa overlap (1-216:65-286) 10 20 30 pF1KB8 MSSLYYANALFSKYPASSSVFATGAFPEQT ::: :..:. : ::.. : .: . XP_011 GFNAARRSDYKTQQIINPAEQQRPRAPPLPMSS-YFVNSTFPVTLASGQESFLGQLPLYS 40 50 60 70 80 90 40 50 60 70 80 pF1KB8 SCAFASNPQR--PG-YGAGSGASFAASMQGLYPGGGGMAGQSAA---GVYAAGYGLEPSS : ..: .: : :. :: : : . . . .. :: .:: :..: : : : . :. XP_011 S-GYA-DPLRHYPAPYGPGPGQDKGFATSSYYPPAGGGYGRAAPCDYGPAPAFYREKESA 100 110 120 130 140 150 90 100 110 120 130 pF1KB8 FNMHCA----PFE-QNLSGVCPGDSAKAAGAKEQRDSDLAAESNFRIYPWMR-------- . : ::. . .. : :.. . ..::. : .::::. XP_011 CALSGADEQPPFHPEPRKSDCAQDKSVFGETEEQKCST-------PVYPWMQRMNSCNSS 160 170 180 190 200 140 150 160 170 180 190 pF1KB8 SSGTDRKRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHTLCLTERQIKIWFQNRRMK : : . .::::::::::::::::::::::::::::::::::.:::::::::::::::::: XP_011 SFGPSGRRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMK 210 220 230 240 250 260 200 210 pF1KB8 WKKENKTAGPGTTGQDRAEAEEEEEE ::::.: ...: :: :::.. XP_011 WKKESKLL---SASQLSAEEEEEKQAE 270 280 >>NP_076919 (OMIM: 142951) homeobox protein Hox-A6 [Homo (233 aa) initn: 458 init1: 392 opt: 455 Z-score: 394.5 bits: 80.2 E(85289): 3.1e-15 Smith-Waterman score: 456; 43.3% identity (62.3% similar) in 215 aa overlap (12-215:40-233) 10 20 30 pF1KB8 MSSLYYANALFSKYPASS---SVFATGAFPEQTSCAFASNP ..: ::: ..... : .:.. ..: : NP_076 FPGSLPSGQDSFLGQLPLYQAGYDALRPFPASYGASSLPDKTYTSPCFYQQSNSVLACNR 10 20 30 40 50 60 40 50 60 70 80 90 pF1KB8 QRPGYGAGSGASFAASMQGLYPGGGGMAGQSAAGVYAAGYGLEPSSFNMHCAPFEQNLSG :::. : ...: :.:.: : . : : .: .: ::. . NP_076 ASYEYGASCFYS-DKDLSGASPSGSGK--QRGPGDY------------LHFSP-EQQYK- 70 80 90 100 110 100 110 120 130 140 150 pF1KB8 VCPGDSAKAAGAKEQRDSDLAAESNFRIYPWMRSS--------GTDRKRGRQTYTRYQTL : ::... : : .: . . .::::. :. .:::::::::::: NP_076 --P-DSSSGQG-KALHDEGADRKYTSPVYPWMQRMNSCAGAVYGSHGRRGRQTYTRYQTL 120 130 140 150 160 160 170 180 190 200 210 pF1KB8 ELEKEFHYNRYLTRRRRIEIAHTLCLTERQIKIWFQNRRMKWKKENKTAGPGTTGQDRAE :::::::.:::::::::::::..:::::::::::::::::::::::: . . . .: NP_076 ELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKENKLINSTQPSGEDSE 170 180 190 200 210 220 pF1KB8 AEEEEEE :. : NP_076 AKAGE 230 >>NP_710160 (OMIM: 142972) homeobox protein Hox-C6 isofo (153 aa) initn: 430 init1: 383 opt: 432 Z-score: 377.8 bits: 76.5 E(85289): 2.6e-14 Smith-Waterman score: 434; 53.2% identity (71.9% similar) in 139 aa overlap (94-217:7-145) 70 80 90 100 110 120 pF1KB8 GMAGQSAAGVYAAGYGLEPSSFNMHCAPFEQNLSGVCPGDSAKAAGAKEQ-RDSDLAAES :: : : ..:: : . .. NP_710 MLSNCRQNTLGHNTQTSIAQDFSSEQGRTAPQDQKA 10 20 30 130 140 150 160 170 pF1KB8 NFRIYPWMR--------SSGTDRKRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHTL ...:::::. . :.::.:::: :.::::::::::::.:::::::::::::..: NP_710 SIQIYPWMQRMNSHSGVGYGADRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANAL 40 50 60 70 80 90 180 190 200 210 pF1KB8 CLTERQIKIWFQNRRMKWKKENKTA------GPGTTGQDRAEAEEEEEE :::::::::::::::::::::.. . : :.:... . ::..:: NP_710 CLTERQIKIWFQNRRMKWKKESNLTSTLSGGGGGATADSLGGKEEKREETEEEKQKE 100 110 120 130 140 150 >>NP_061975 (OMIM: 142952) homeobox protein Hox-A5 [Homo (270 aa) initn: 442 init1: 379 opt: 435 Z-score: 377.3 bits: 77.2 E(85289): 2.8e-14 Smith-Waterman score: 438; 39.6% identity (64.5% similar) in 197 aa overlap (16-197:59-255) 10 20 30 40 pF1KB8 MSSLYYANALFSKYPASSSVFATGAFPEQTSCAFASNPQRPGYGA ..:. :..: .. . . .. : .: :. NP_061 SVSEQFRDSASMHSGRYGYGYNGMDLSVGRSGSGHFGSGERARSYAASASAAPAEPRYSQ 30 40 50 60 70 80 50 60 70 80 90 pF1KB8 GSGASFAASMQGL-------YPGGGGMAGQSAAGVYAAGYGLEPSSFNMHCAPFEQNLSG . .. . . . : ::. . : . . ..: . . .: .. . :: NP_061 PATSTHSPQPDPLPCSAVAPSPGSDSHHGGKNSLSNSSGASADAGSTHISSREGVGTASG 90 100 110 120 130 140 100 110 120 130 140 150 pF1KB8 VCPGDSAKAAGAKEQRDSDLAAESNFRIYPWMRS--------SGTDRKRGRQTYTRYQTL . :.. :. : . . : .. .::::::. .: . ::.: .::::::: NP_061 AEEDAPASSEQASAQSEPSPAPPAQPQIYPWMRKLHISHDNIGGPEGKRARTAYTRYQTL 150 160 170 180 190 200 160 170 180 190 200 210 pF1KB8 ELEKEFHYNRYLTRRRRIEIAHTLCLTERQIKIWFQNRRMKWKKENKTAGPGTTGQDRAE :::::::.::::::::::::::.:::.:::::::::::::::::.:: NP_061 ELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKDNKLKSMSMAAAGGAF 210 220 230 240 250 260 pF1KB8 AEEEEEE NP_061 RP 270 >>NP_004494 (OMIM: 142972) homeobox protein Hox-C6 isofo (235 aa) initn: 415 init1: 383 opt: 432 Z-score: 375.6 bits: 76.7 E(85289): 3.5e-14 Smith-Waterman score: 449; 41.1% identity (63.2% similar) in 231 aa overlap (8-217:2-227) 10 20 30 40 50 pF1KB8 MSSLYYANALFSKYPASSSVFATG--AFPEQTSCAFASNPQR--PGYGAGSGASFAASMQ :. :.. :. : .: : ..:. . . : .: : :::. . . : NP_004 MNSYFTN-PSLSCHLAGGQDVLPNVALNSTAYDPVRHFSTYGAAVAQNRIYSTP 10 20 30 40 50 60 70 80 90 100 110 pF1KB8 GLYPGGGGMAGQSAAGVYAAGYGLEPSSFNM--HCAPFEQNLSGVCPGDSAKAAGAKEQ- .: ... .:. : : : . . .: .: .:: : : ..:: NP_004 -FYSPQENVVFSSSRGPYDYGSNSFYQEKDMLSNC---RQNTLGHNTQTSIAQDFSSEQG 60 70 80 90 100 120 130 140 150 160 pF1KB8 RDSDLAAESNFRIYPWMR--------SSGTDRKRGRQTYTRYQTLELEKEFHYNRYLTRR : . .....:::::. . :.::.:::: :.::::::::::::.::::::: NP_004 RTAPQDQKASIQIYPWMQRMNSHSGVGYGADRRRGRQIYSRYQTLELEKEFHFNRYLTRR 110 120 130 140 150 160 170 180 190 200 210 pF1KB8 RRIEIAHTLCLTERQIKIWFQNRRMKWKKENKTA------GPGTTGQDRAEAEEEEEE ::::::..::::::::::::::::::::::.. . : :.:... . ::..:: NP_004 RRIEIANALCLTERQIKIWFQNRRMKWKKESNLTSTLSGGGGGATADSLGGKEEKREETE 170 180 190 200 210 220 NP_004 EEKQKE 230 217 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 23:20:58 2016 done: Mon Nov 7 23:20:58 2016 Total Scan time: 5.410 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]