FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KB8912, 251 aa 1>>>pF1KB8912 251 - 251 aa - 251 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 12.5865+/-0.000453; mu= -14.3217+/- 0.029 mean_var=664.7632+/-132.907, 0's: 0 Z-trim(126.5): 95 B-trim: 0 in 0/61 Lambda= 0.049744 statistics sampled from 52393 (52504) to 52393 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.853), E-opt: 0.2 (0.616), width: 16 Scan time: 6.860 The best scores are: opt bits E(85289) NP_076920 (OMIM: 142965) homeobox protein Hox-B4 [ ( 251) 1845 145.9 6.4e-35 NP_055435 (OMIM: 142974) homeobox protein Hox-C4 [ ( 264) 925 79.9 4.9e-15 NP_705897 (OMIM: 142974) homeobox protein Hox-C4 [ ( 264) 925 79.9 4.9e-15 NP_055436 (OMIM: 142981) homeobox protein Hox-D4 [ ( 255) 856 75.0 1.5e-13 NP_002132 (OMIM: 142953) homeobox protein Hox-A4 [ ( 320) 743 67.0 4.8e-11 NP_061975 (OMIM: 142952) homeobox protein Hox-A5 [ ( 270) 527 51.4 2e-06 NP_002138 (OMIM: 142960) homeobox protein Hox-B5 [ ( 269) 487 48.5 1.4e-05 XP_011523029 (OMIM: 142961) PREDICTED: homeobox pr ( 288) 461 46.7 5.5e-05 XP_005257340 (OMIM: 142961) PREDICTED: homeobox pr ( 224) 457 46.2 5.7e-05 NP_061825 (OMIM: 142961) homeobox protein Hox-B6 [ ( 224) 457 46.2 5.7e-05 XP_005257341 (OMIM: 142961) PREDICTED: homeobox pr ( 224) 457 46.2 5.7e-05 NP_061826 (OMIM: 142973) homeobox protein Hox-C5 [ ( 222) 456 46.2 6e-05 XP_005249787 (OMIM: 142954) PREDICTED: homeobox pr ( 443) 432 44.8 0.0003 XP_006715778 (OMIM: 142954) PREDICTED: homeobox pr ( 443) 432 44.8 0.0003 XP_011513645 (OMIM: 142954) PREDICTED: homeobox pr ( 443) 432 44.8 0.0003 NP_705895 (OMIM: 142954) homeobox protein Hox-A3 i ( 443) 432 44.8 0.0003 XP_005249789 (OMIM: 142954) PREDICTED: homeobox pr ( 443) 432 44.8 0.0003 XP_005249788 (OMIM: 142954) PREDICTED: homeobox pr ( 443) 432 44.8 0.0003 NP_109377 (OMIM: 142954) homeobox protein Hox-A3 i ( 443) 432 44.8 0.0003 NP_076919 (OMIM: 142951) homeobox protein Hox-A6 [ ( 233) 421 43.7 0.00035 NP_062458 (OMIM: 142985) homeobox protein Hox-D8 i ( 290) 414 43.3 0.00057 NP_001186675 (OMIM: 142985) homeobox protein Hox-D ( 289) 411 43.1 0.00066 NP_710160 (OMIM: 142972) homeobox protein Hox-C6 i ( 153) 398 41.8 0.00085 NP_004494 (OMIM: 142972) homeobox protein Hox-C6 i ( 235) 398 42.0 0.0011 XP_011509367 (OMIM: 142980) PREDICTED: homeobox pr ( 432) 404 42.8 0.0012 XP_006712540 (OMIM: 142980) PREDICTED: homeobox pr ( 432) 404 42.8 0.0012 XP_005246568 (OMIM: 142980) PREDICTED: homeobox pr ( 432) 404 42.8 0.0012 XP_011509368 (OMIM: 142980) PREDICTED: homeobox pr ( 432) 404 42.8 0.0012 XP_005246567 (OMIM: 142980) PREDICTED: homeobox pr ( 432) 404 42.8 0.0012 XP_005246570 (OMIM: 142980) PREDICTED: homeobox pr ( 432) 404 42.8 0.0012 XP_005246566 (OMIM: 142980) PREDICTED: homeobox pr ( 432) 404 42.8 0.0012 NP_008829 (OMIM: 142980) homeobox protein Hox-D3 [ ( 432) 404 42.8 0.0012 NP_000200 (OMIM: 125853,260370,600733,606176,60639 ( 283) 387 41.4 0.0022 NP_008827 (OMIM: 142950) homeobox protein Hox-A7 [ ( 230) 377 40.5 0.0031 NP_004493 (OMIM: 142962) homeobox protein Hox-B7 [ ( 217) 362 39.4 0.0063 >>NP_076920 (OMIM: 142965) homeobox protein Hox-B4 [Homo (251 aa) initn: 1845 init1: 1845 opt: 1845 Z-score: 748.0 bits: 145.9 E(85289): 6.4e-35 Smith-Waterman score: 1845; 100.0% identity (100.0% similar) in 251 aa overlap (1-251:1-251) 10 20 30 40 50 60 pF1KB8 MAMSSFLINSNYVDPKFPPCEEYSQSDYLPSDHSPGYYAGGQRRESSFQPEAGFGRRAAC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_076 MAMSSFLINSNYVDPKFPPCEEYSQSDYLPSDHSPGYYAGGQRRESSFQPEAGFGRRAAC 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB8 TVQRYAACRDPGPPPPPPPPPPPPPPPGLSPRAPAPPPAGALLPEPGQRCEAVSSSPPPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_076 TVQRYAACRDPGPPPPPPPPPPPPPPPGLSPRAPAPPPAGALLPEPGQRCEAVSSSPPPP 70 80 90 100 110 120 130 140 150 160 170 180 pF1KB8 PCAQNPLHPSPSHSACKEPVVYPWMRKVHVSTVNPNYAGGEPKRSRTAYTRQQVLELEKE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_076 PCAQNPLHPSPSHSACKEPVVYPWMRKVHVSTVNPNYAGGEPKRSRTAYTRQQVLELEKE 130 140 150 160 170 180 190 200 210 220 230 240 pF1KB8 FHYNRYLTRRRRVEIAHALCLSERQIKIWFQNRRMKWKKDHKLPNTKIRSGGAAGSAGGP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_076 FHYNRYLTRRRRVEIAHALCLSERQIKIWFQNRRMKWKKDHKLPNTKIRSGGAAGSAGGP 190 200 210 220 230 240 250 pF1KB8 PGRPNGGPRAL ::::::::::: NP_076 PGRPNGGPRAL 250 >>NP_055435 (OMIM: 142974) homeobox protein Hox-C4 [Homo (264 aa) initn: 1096 init1: 704 opt: 925 Z-score: 390.9 bits: 79.9 E(85289): 4.9e-15 Smith-Waterman score: 953; 59.9% identity (71.8% similar) in 252 aa overlap (1-237:1-231) 10 20 30 40 50 60 pF1KB8 MAMSSFLINSNYVDPKFPPCEEYSQSDYLPSDHSPGYYAGGQRRESSFQPEAGFGRRAAC : :::.:..:::.::::::::::::..:.: .::: :: :. :::.:: . NP_055 MIMSSYLMDSNYIDPKFPPCEEYSQNSYIP-EHSPEYY--GRTRESGFQHHH-------- 10 20 30 40 70 80 90 100 110 pF1KB8 TVQRYAACRDPGPPPPPPPPPPPPP-------PPGLSPRAPAPPPAGALLPEPGQR-CE- .. ::::: : : :: : :. .: :: :: .: :: NP_055 --------QELYPPPPPRPSYPERQYSCTSLQGPGNS-RGHGPAQAGHHHPEKSQSLCEP 50 60 70 80 90 100 120 130 140 150 160 pF1KB8 ------AVSSSPPPPPCAQNPLHPSPSHSACKEPVVYPWMRKVHVSTVNPNYAGGEPKRS ..: :: :: :.: : :: .: :.:.:::::.:.::::::::: ::::::: NP_055 APLSGASASPSPAPPACSQ-PAPDHPSSAASKQPIVYPWMKKIHVSTVNPNYNGGEPKRS 110 120 130 140 150 170 180 190 200 210 220 pF1KB8 RTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHALCLSERQIKIWFQNRRMKWKKDHKLPN :::::::::::::::::::::::::::.::::.:::::::::::::::::::::::.::: NP_055 RTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWKKDHRLPN 160 170 180 190 200 210 230 240 250 pF1KB8 TKIRSGGAAGSAGGPPGRPNGGPRAL ::.::. ::.: NP_055 TKVRSAPPAGAAPSTLSAATPGTSEDHSQSATPPEQQRAEDITRL 220 230 240 250 260 >>NP_705897 (OMIM: 142974) homeobox protein Hox-C4 [Homo (264 aa) initn: 1096 init1: 704 opt: 925 Z-score: 390.9 bits: 79.9 E(85289): 4.9e-15 Smith-Waterman score: 953; 59.9% identity (71.8% similar) in 252 aa overlap (1-237:1-231) 10 20 30 40 50 60 pF1KB8 MAMSSFLINSNYVDPKFPPCEEYSQSDYLPSDHSPGYYAGGQRRESSFQPEAGFGRRAAC : :::.:..:::.::::::::::::..:.: .::: :: :. :::.:: . NP_705 MIMSSYLMDSNYIDPKFPPCEEYSQNSYIP-EHSPEYY--GRTRESGFQHHH-------- 10 20 30 40 70 80 90 100 110 pF1KB8 TVQRYAACRDPGPPPPPPPPPPPPP-------PPGLSPRAPAPPPAGALLPEPGQR-CE- .. ::::: : : :: : :. .: :: :: .: :: NP_705 --------QELYPPPPPRPSYPERQYSCTSLQGPGNS-RGHGPAQAGHHHPEKSQSLCEP 50 60 70 80 90 100 120 130 140 150 160 pF1KB8 ------AVSSSPPPPPCAQNPLHPSPSHSACKEPVVYPWMRKVHVSTVNPNYAGGEPKRS ..: :: :: :.: : :: .: :.:.:::::.:.::::::::: ::::::: NP_705 APLSGASASPSPAPPACSQ-PAPDHPSSAASKQPIVYPWMKKIHVSTVNPNYNGGEPKRS 110 120 130 140 150 170 180 190 200 210 220 pF1KB8 RTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHALCLSERQIKIWFQNRRMKWKKDHKLPN :::::::::::::::::::::::::::.::::.:::::::::::::::::::::::.::: NP_705 RTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWKKDHRLPN 160 170 180 190 200 210 230 240 250 pF1KB8 TKIRSGGAAGSAGGPPGRPNGGPRAL ::.::. ::.: NP_705 TKVRSAPPAGAAPSTLSAATPGTSEDHSQSATPPEQQRAEDITRL 220 230 240 250 260 >>NP_055436 (OMIM: 142981) homeobox protein Hox-D4 [Homo (255 aa) initn: 965 init1: 599 opt: 856 Z-score: 364.3 bits: 75.0 E(85289): 1.5e-13 Smith-Waterman score: 862; 58.2% identity (72.5% similar) in 244 aa overlap (1-237:1-229) 10 20 30 40 50 60 pF1KB8 MAMSSFLINSNYVDPKFPPCEEYSQSDYLPSDHSPGYYAGGQRRESSFQPEAGFGRRAAC :.:::...::.:::::::::::: :. :: .... ::.:: . ..::: :. : NP_055 MVMSSYMVNSKYVDPKFPPCEEYLQGGYL-GEQGADYYGGGAQG-ADFQPP-GLYPRPDF 10 20 30 40 50 70 80 90 100 110 pF1KB8 TVQRYAACRDPGPPPPPPP--PPPPPPPPG---LSPRAPAP-PPAGALLPEPGQRCEAVS : ... ::: : : :: .: : : ::: : :: : : : NP_055 GEQPFGGS-GPGPGSALPARGHGQEPGGPGGHYAAPGEPCPAPPAPPPAPLPGAR--AYS 60 70 80 90 100 110 120 130 140 150 160 170 pF1KB8 SSPPPPPCAQNPLHPSPSHSACKEP-VVYPWMRKVHVSTVNPNYAGGEPKRSRTAYTRQQ .: : : :: .: :.: ::::::.::::..:::::.::::::::::::::: NP_055 QSDPKQP---------PSGTALKQPAVVYPWMKKVHVNSVNPNYTGGEPKRSRTAYTRQQ 120 130 140 150 160 180 190 200 210 220 230 pF1KB8 VLELEKEFHYNRYLTRRRRVEIAHALCLSERQIKIWFQNRRMKWKKDHKLPNTKIRSGGA :::::::::.:::::::::.::::.::::::::::::::::::::::::::::: ::... NP_055 VLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDHKLPNTKGRSSSS 170 180 190 200 210 220 240 250 pF1KB8 AGSAGGPPGRPNGGPRAL ..:. NP_055 SSSSSCSSSVAPSQHLQPMAKDHHTDLTTL 230 240 250 >>NP_002132 (OMIM: 142953) homeobox protein Hox-A4 [Homo (320 aa) initn: 881 init1: 686 opt: 743 Z-score: 319.4 bits: 67.0 E(85289): 4.8e-11 Smith-Waterman score: 803; 50.2% identity (66.7% similar) in 255 aa overlap (12-243:42-296) 10 20 30 pF1KB8 MAMSSFLINSNYVDPKFPPCEEYS-QSDYLPS-----DHSP : .: :: .. :. :: . . NP_002 YIEPKFPPFEEYAQHSGSGGADGGPGGGPGYQQPPAPPTQHLPLQQPQLPHAGGGREPTA 20 30 40 50 60 70 40 50 60 70 80 pF1KB8 GYYAGGQRRESSFQPEAGFGRRAACTVQR---YAACRDPGPPPPPPPPPPPPPPPG---- .::: :: .. : . ..: . : . .:: :: : :: :. NP_002 SYYAPRTAREPAYPAAALYPAHGAADTAYPYGYRGGASPGRPPQPEQPPAQAKGPAHGLH 80 90 100 110 120 130 90 100 110 120 130 pF1KB8 ----LSPRAPAPPPAGALLPEPGQRCEAVSSSPPPPPCAQNPLHP------SPSHSACKE :.:. : : :. : .::::. ..: : .. : : :: :: NP_002 ASHVLQPQLPPPLQPRAVPPAAPRRCEAAPATPGVPAGGSAPACPLLLADKSPLGLKGKE 140 150 160 170 180 190 140 150 160 170 180 190 pF1KB8 PVVYPWMRKVHVSTVNPNYAGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHA :::::::.:.:::.:::.: ::::::::::::::::::::::::.:::::::::.::::. NP_002 PVVYPWMKKIHVSAVNPSYNGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHT 200 210 220 230 240 250 200 210 220 230 240 250 pF1KB8 LCLSERQIKIWFQNRRMKWKKDHKLPNTKIRSGGAAGSAGGPPGRPNGGPRAL :::::::.:::::::::::::::::::::.::...:....::::. NP_002 LCLSERQVKIWFQNRRMKWKKDHKLPNTKMRSSNSASASAGPPGKAQTQSPHLHPHPHPS 260 270 280 290 300 310 NP_002 TSTPVPSSI 320 >>NP_061975 (OMIM: 142952) homeobox protein Hox-A5 [Homo (270 aa) initn: 514 init1: 396 opt: 527 Z-score: 236.4 bits: 51.4 E(85289): 2e-06 Smith-Waterman score: 536; 43.4% identity (60.2% similar) in 226 aa overlap (23-234:49-267) 10 20 30 40 50 pF1KB8 MAMSSFLINSNYVDPKFPPCEEYSQSDYLPSDHSPGYYAGGQRRESSFQPEA :. : . . :....:.: :. : NP_061 YQLHNYGDHSSVSEQFRDSASMHSGRYGYGYNGMDLSVGRSGSGHFGSGER-ARSYAASA 20 30 40 50 60 70 60 70 80 90 100 pF1KB8 GFGRRAACTVQRYA--ACRDPGPPPPPPPPPPPPPPPG----------LSPRAPAPPPAG . :: . ::. : .: : : : : :: :: . : :: NP_061 S----AAPAEPRYSQPATSTHSPQPDPLPCSAVAPSPGSDSHHGGKNSLSNSSGASADAG 80 90 100 110 120 130 110 120 130 140 150 pF1KB8 A--LLPEPGQRCEAVSSSPPPPPCAQNPLHPSPSHSACKEPVVYPWMRKVHVSTVNPNYA . . . : . . : : . :: . .: .::::::.:.: . : . NP_061 STHISSREGVGTASGAEEDAPASSEQASAQSEPSPAPPAQPQIYPWMRKLHIS--HDNIG 140 150 160 170 180 190 160 170 180 190 200 210 pF1KB8 GGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHALCLSERQIKIWFQNRRMKWK : : ::.:::::: :.::::::::.:::::::::.::::::::::::::::::::::::: NP_061 GPEGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWK 200 210 220 230 240 250 220 230 240 250 pF1KB8 KDHKLPNTKIRSGGAAGSAGGPPGRPNGGPRAL ::.:: . .. ..:.: NP_061 KDNKLKSMSMAAAGGAFRP 260 270 >>NP_002138 (OMIM: 142960) homeobox protein Hox-B5 [Homo (269 aa) initn: 531 init1: 398 opt: 487 Z-score: 220.9 bits: 48.5 E(85289): 1.4e-05 Smith-Waterman score: 487; 58.7% identity (77.8% similar) in 126 aa overlap (111-234:144-266) 90 100 110 120 130 pF1KB8 PPPPPPPGLSPRAPAPPPAGALLPEPGQRCEAVS--SSPPPPPCAQNPLHPSPSHSACKE ::.: ::: .:. : . . NP_002 ASSPSDQATSASSSANFTEIDEASASSEPEEAASQLSSPSLARAQPEPMATSTAAPEGQT 120 130 140 150 160 170 140 150 160 170 180 190 pF1KB8 PVVYPWMRKVHVSTVNPNYAGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHA : ..:::::.:.: ...: . ::.:::::: :.::::::::.:::::::::.::::: NP_002 PQIFPWMRKLHISH---DMTGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHA 180 190 200 210 220 230 200 210 220 230 240 250 pF1KB8 LCLSERQIKIWFQNRRMKWKKDHKLPNTKIRSGGAAGSAGGPPGRPNGGPRAL ::::::::::::::::::::::.:: . .. ..:.: NP_002 LCLSERQIKIWFQNRRMKWKKDNKLKSMSLATAGSAFQP 240 250 260 >>XP_011523029 (OMIM: 142961) PREDICTED: homeobox protei (288 aa) initn: 417 init1: 361 opt: 461 Z-score: 210.5 bits: 46.7 E(85289): 5.5e-05 Smith-Waterman score: 487; 43.0% identity (59.6% similar) in 223 aa overlap (15-223:58-271) 10 20 30 40 pF1KB8 MAMSSFLINSNYVDPKFPPCEEYSQSDYLPSDHSPGYYAGGQRR :. :: .:.:. .. : :.:: XP_011 STGRQFCGFNAARRSDYKTQQIINPAEQQRPRAPP---LPMSSYFVNSTFPVTLASGQ-- 30 40 50 60 70 80 50 60 70 80 90 100 pF1KB8 ESSFQPEAGFGRRAACTVQRYAACRDPGPPPPPPPPPP---PPPPPGLSPRAPAP-PPAG :: . .. : ...: : ::: :: : . :: :: XP_011 ESFLGQLPLYSSGYADPLRHYPAPYGPGPGQDKGFATSSYYPPAGGGYGRAAPCDYGPAP 90 100 110 120 130 140 110 120 130 140 150 pF1KB8 ALLPEPGQRCEAVSSS---PP--PPP----CAQNP-LHPSPSHSACKEPVVYPWMRKVHV :. : . : :.:.. :: : : :::. . .. :. :: ::::... XP_011 AFYREKESAC-ALSGADEQPPFHPEPRKSDCAQDKSVFGETEEQKCSTPV-YPWMQRM-- 150 160 170 180 190 160 170 180 190 200 210 pF1KB8 STVNPNYAGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHALCLSERQIKIWF .. : . : .:.: .::: :.::::::::::::::::::.::::::::.:::::::: XP_011 NSCNSSSFGPSGRRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWF 200 210 220 230 240 250 220 230 240 250 pF1KB8 QNRRMKWKKDHKLPNTKIRSGGAAGSAGGPPGRPNGGPRAL :::::::::. :: XP_011 QNRRMKWKKESKLLSASQLSAEEEEEKQAE 260 270 280 >>XP_005257340 (OMIM: 142961) PREDICTED: homeobox protei (224 aa) initn: 394 init1: 361 opt: 457 Z-score: 210.2 bits: 46.2 E(85289): 5.7e-05 Smith-Waterman score: 475; 43.9% identity (60.4% similar) in 212 aa overlap (26-223:2-207) 10 20 30 40 50 60 pF1KB8 MAMSSFLINSNYVDPKFPPCEEYSQSDYLPSDHSPGYYAGGQRRESSFQPEAGFGRRAAC :.:. .. : :.:: :: . .. : XP_005 MSSYFVNSTFPVTLASGQ--ESFLGQLPLYSSGYAD 10 20 30 70 80 90 100 110 pF1KB8 TVQRYAACRDPGPPPPPPPPPP---PPPPPGLSPRAPAP-PPAGALLPEPGQRCEAVSSS ...: : ::: :: : . :: :: :. : . : :.:.. XP_005 PLRHYPAPYGPGPGQDKGFATSSYYPPAGGGYGRAAPCDYGPAPAFYREKESAC-ALSGA 40 50 60 70 80 90 120 130 140 150 160 pF1KB8 ---PP--PPP----CAQNP-LHPSPSHSACKEPVVYPWMRKVHVSTVNPNYAGGEPKRSR :: : : :::. . .. :. :: ::::.... . : . : .:.: XP_005 DEQPPFHPEPRKSDCAQDKSVFGETEEQKCSTPV-YPWMQRMN--SCNSSSFGPSGRRGR 100 110 120 130 140 150 170 180 190 200 210 220 pF1KB8 TAYTRQQVLELEKEFHYNRYLTRRRRVEIAHALCLSERQIKIWFQNRRMKWKKDHKLPNT .::: :.::::::::::::::::::.::::::::.:::::::::::::::::. :: XP_005 QTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKESKLLSA 160 170 180 190 200 210 230 240 250 pF1KB8 KIRSGGAAGSAGGPPGRPNGGPRAL XP_005 SQLSAEEEEEKQAE 220 >>NP_061825 (OMIM: 142961) homeobox protein Hox-B6 [Homo (224 aa) initn: 394 init1: 361 opt: 457 Z-score: 210.2 bits: 46.2 E(85289): 5.7e-05 Smith-Waterman score: 475; 43.9% identity (60.4% similar) in 212 aa overlap (26-223:2-207) 10 20 30 40 50 60 pF1KB8 MAMSSFLINSNYVDPKFPPCEEYSQSDYLPSDHSPGYYAGGQRRESSFQPEAGFGRRAAC :.:. .. : :.:: :: . .. : NP_061 MSSYFVNSTFPVTLASGQ--ESFLGQLPLYSSGYAD 10 20 30 70 80 90 100 110 pF1KB8 TVQRYAACRDPGPPPPPPPPPP---PPPPPGLSPRAPAP-PPAGALLPEPGQRCEAVSSS ...: : ::: :: : . :: :: :. : . : :.:.. NP_061 PLRHYPAPYGPGPGQDKGFATSSYYPPAGGGYGRAAPCDYGPAPAFYREKESAC-ALSGA 40 50 60 70 80 90 120 130 140 150 160 pF1KB8 ---PP--PPP----CAQNP-LHPSPSHSACKEPVVYPWMRKVHVSTVNPNYAGGEPKRSR :: : : :::. . .. :. :: ::::.... . : . : .:.: NP_061 DEQPPFHPEPRKSDCAQDKSVFGETEEQKCSTPV-YPWMQRMN--SCNSSSFGPSGRRGR 100 110 120 130 140 150 170 180 190 200 210 220 pF1KB8 TAYTRQQVLELEKEFHYNRYLTRRRRVEIAHALCLSERQIKIWFQNRRMKWKKDHKLPNT .::: :.::::::::::::::::::.::::::::.:::::::::::::::::. :: NP_061 QTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKESKLLSA 160 170 180 190 200 210 230 240 250 pF1KB8 KIRSGGAAGSAGGPPGRPNGGPRAL NP_061 SQLSAEEEEEKQAE 220 251 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 02:25:07 2016 done: Sun Nov 6 02:25:08 2016 Total Scan time: 6.860 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]