(Linear) (Six-base) MAPSORT of: KIEE2016.seq Check: 2025 from: 1 to: 1779 KIEE2016.orf With 182 enzymes: SgfI * July 15, 2010 18:53 .. AarI CACCTGCnnnn'nnnn_ Cuts at: 0 215 1779 Size: 215 1564 AatII G_ACGT'C Cuts at: 0 317 335 1779 Size: 317 18 1444 Fragments arranged by size: 1444 317 18 AccI GT'mk_AC Cuts at: 0 41 1779 Size: 41 1738 AcuI CTGAAGnnnnnnnnnnnnnn_nn' Cuts at: 0 1060 1240 1417 1779 Size: 1060 180 177 362 Fragments arranged by size: 1060 362 180 177 AflIII A'CryG_T Cuts at: 0 825 1153 1779 Size: 825 328 626 Fragments arranged by size: 825 626 328 AlfI GCAnnnnnnTGCnnnnnnnnnn_nn' Cuts at: 0 317 1779 Size: 317 1462 AlwNI CAG_nnn'CTG Cuts at: 0 447 1038 1218 1530 1567 1779 Size: 447 591 180 312 37 212 Fragments arranged by size: 591 447 312 212 180 37 ApaI G_GGCC'C Cuts at: 0 235 911 1737 1779 Size: 235 676 826 42 Fragments arranged by size: 826 676 235 42 ApoI r'AATT_y Cuts at: 0 844 1779 Size: 844 935 AvaI C'yCGr_G Cuts at: 0 29 1442 1779 Size: 29 1413 337 Fragments arranged by size: 1413 337 29 AvrII C'CTAG_G Cuts at: 0 1362 1779 Size: 1362 417 BanI G'GyrC_C Cuts at: 0 34 307 1779 Size: 34 273 1472 Fragments arranged by size: 1472 273 34 BanII G_rGCy'C Cuts at: 0 235 581 911 1148 1204 1737 1779 Size: 235 346 330 237 56 533 42 Fragments arranged by size: 533 346 330 237 235 56 42 BbeI G_GCGC'C Cuts at: 0 38 311 1779 Size: 38 273 1468 Fragments arranged by size: 1468 273 38 BbvCI CC'TCA_GC Cuts at: 0 1469 1779 Size: 1469 310 BglI GCCn_nnn'nGGC Cuts at: 0 230 1779 Size: 230 1549 BglII A'GATC_T Cuts at: 0 774 1779 Size: 774 1005 BlpI GC'TnA_GC Cuts at: 0 239 1211 1681 1779 Size: 239 972 470 98 Fragments arranged by size: 972 470 239 98 Bme1580I G_kGCm'C Cuts at: 0 235 572 911 1737 1779 Size: 235 337 339 826 42 Fragments arranged by size: 826 339 337 235 42 BmrI ACTGGGnnnn_n' Cuts at: 0 240 1779 Size: 240 1539 BpmI CTGGAGnnnnnnnnnnnnnn_nn' Cuts at: 0 247 952 1027 1071 1779 Size: 247 705 75 44 708 Fragments arranged by size: 708 705 247 75 44 Bpu10I CC'TnA_GC Cuts at: 0 800 1469 1779 Size: 800 669 310 Fragments arranged by size: 800 669 310 BpuEI CTTGAGnnnnnnnnnnnnnn_nn' Cuts at: 0 1015 1779 Size: 1015 764 BsaI GGTCTCn'nnnn_ Cuts at: 0 112 638 949 1779 Size: 112 526 311 830 Fragments arranged by size: 830 526 311 112 BsaAI yAC'GTr Cuts at: 0 1674 1779 Size: 1674 105 BsaBI GATnn'nnATC Cuts at: 0 976 1779 Size: 976 803 BsaHI Gr'CG_yC Cuts at: 0 35 124 308 314 332 1779 Size: 35 89 184 6 18 1447 Fragments arranged by size: 1447 184 89 35 18 6 BsaWI w'CCGG_w Cuts at: 0 98 1779 Size: 98 1681 BsaXI ACnnnnnCTCCnnnnnnn_nnn' Cuts at: 0 1130 1160 1779 Size: 1130 30 619 Fragments arranged by size: 1130 619 30 BseRI GAGGAGnnnnnnnn_nn' Cuts at: 0 967 1074 1462 1779 Size: 967 107 388 317 Fragments arranged by size: 967 388 317 107 BsgI GTGCAGnnnnnnnnnnnnnn_nn' Cuts at: 0 280 679 1779 Size: 280 399 1100 Fragments arranged by size: 1100 399 280 BsiEI CG_ry'CG Cuts at: 0 103 1779 Size: 103 1676 BsiHKAI G_wGCw'C Cuts at: 0 24 370 1148 1204 1682 1779 Size: 24 346 778 56 478 97 Fragments arranged by size: 778 478 346 97 56 24 BsmI GAATG_Cn' Cuts at: 0 1751 1779 Size: 1751 28 Bsp1286I G_dGCh'C Cuts at: 0 24 235 370 572 581 911 1148 1204 Size: 24 211 135 202 9 330 237 56 Cuts at: 1204 1682 1737 1779 Size: 478 55 42 Fragments arranged by size: 478 330 237 211 202 135 56 55 42 24 9 BspMI ACCTGCnnnn'nnnn_ Cuts at: 0 215 1124 1779 Size: 215 909 655 Fragments arranged by size: 909 655 215 BsrBI CCG'CTC Cuts at: 0 1646 1779 Size: 1646 133 BsrFI r'CCGG_y Cuts at: 0 645 1516 1625 1779 Size: 645 871 109 154 Fragments arranged by size: 871 645 154 109 BstAPI GCAn_nnn'nTGC Cuts at: 0 486 648 1779 Size: 486 162 1131 Fragments arranged by size: 1131 486 162 BstXI CCAn_nnnn'nTGG Cuts at: 0 1339 1779 Size: 1339 440 BstYI r'GATC_y Cuts at: 0 774 1028 1779 Size: 774 254 751 Fragments arranged by size: 774 751 254 BtgI C'CryG_G Cuts at: 0 572 623 663 1613 1779 Size: 572 51 40 950 166 Fragments arranged by size: 950 572 166 51 40 DraIII CAC_nnn'GTG Cuts at: 0 711 1677 1691 1779 Size: 711 966 14 88 Fragments arranged by size: 966 711 88 14 EaeI y'GGCC_r Cuts at: 0 89 626 974 1420 1779 Size: 89 537 348 446 359 Fragments arranged by size: 537 446 359 348 89 EarI CTCTTCn'nnn_ Cuts at: 0 778 1061 1192 1779 Size: 778 283 131 587 Fragments arranged by size: 778 587 283 131 EciI GGCGGAnnnnnnnnn_nn' Cuts at: 0 979 1084 1779 Size: 979 105 695 Fragments arranged by size: 979 695 105 EcoICRI GAG'CTC Cuts at: 0 1146 1202 1779 Size: 1146 56 577 Fragments arranged by size: 1146 577 56 Eco57MI CTGrAGnnnnnnnnnnnnnn_nn' Cuts at: 0 247 952 1027 1060 1071 1240 1417 1779 Size: 247 705 75 33 11 169 177 362 Fragments arranged by size: 705 362 247 177 169 75 33 11 EcoNI CCTnn'n_nnAGG Cuts at: 0 739 1779 Size: 739 1040 EcoO109I rG'GnC_Cy Cuts at: 0 48 231 1044 1224 1359 1734 1770 1779 Size: 48 183 813 180 135 375 36 9 Fragments arranged by size: 813 375 183 180 135 48 36 9 EcoRI G'AATT_C Cuts at: 0 844 1779 Size: 844 935 FalI AAGnnnnnCTTnnnnnnnn_nnnnn' Cuts at: 0 387 885 1779 Size: 387 498 894 Fragments arranged by size: 894 498 387 HaeII r_GCGC'y Cuts at: 0 38 311 671 1779 Size: 38 273 360 1108 Fragments arranged by size: 1108 360 273 38 Hin4I GAynnnnnvTCnnnnnnnn_nnnnn' Cuts at: 0 23 55 1130 1162 1779 Size: 23 32 1075 32 617 Fragments arranged by size: 1075 617 32 32 23 HincII GTy'rAC Cuts at: 0 431 1779 Size: 431 1348 KasI G'GCGC_C Cuts at: 0 34 307 1779 Size: 34 273 1472 Fragments arranged by size: 1472 273 34 MmeI TCCrACnnnnnnnnnnnnnnnnnn_nn' Cuts at: 0 834 1779 Size: 834 945 MscI TGG'CCA Cuts at: 0 976 1422 1779 Size: 976 446 357 Fragments arranged by size: 976 446 357 MslI CAynn'nnrTG Cuts at: 0 299 839 1337 1779 Size: 299 540 498 442 Fragments arranged by size: 540 498 442 299 MspA1I CmG'CkG Cuts at: 0 129 503 512 913 1035 1395 1501 1615 Size: 129 374 9 401 122 360 106 114 Cuts at: 1615 1779 Size: 164 Fragments arranged by size: 401 374 360 164 129 122 114 106 9 NaeI GCC'GGC Cuts at: 0 1518 1627 1779 Size: 1518 109 152 Fragments arranged by size: 1518 152 109 NarI GG'CG_CC Cuts at: 0 35 308 1779 Size: 35 273 1471 Fragments arranged by size: 1471 273 35 NdeI CA'TA_TG Cuts at: 0 1131 1779 Size: 1131 648 NgoMIV G'CCGG_C Cuts at: 0 1516 1625 1779 Size: 1516 109 154 Fragments arranged by size: 1516 154 109 NspI r_CATG'y Cuts at: 0 1157 1779 Size: 1157 622 PciI A'CATG_T Cuts at: 0 1153 1779 Size: 1153 626 PflMI CCAn_nnn'nTGG Cuts at: 0 447 1302 1779 Size: 447 855 477 Fragments arranged by size: 855 477 447 PmlI CAC'GTG Cuts at: 0 1674 1779 Size: 1674 105 PpuMI rG'GwC_Cy Cuts at: 0 1044 1359 1779 Size: 1044 315 420 Fragments arranged by size: 1044 420 315 PshAI GACnn'nnGTC Cuts at: 0 1552 1779 Size: 1552 227 PspOMI G'GGCC_C Cuts at: 0 231 907 1733 1779 Size: 231 676 826 46 Fragments arranged by size: 826 676 231 46 PstI C_TGCA'G Cuts at: 0 212 1634 1779 Size: 212 1422 145 Fragments arranged by size: 1422 212 145 PvuII CAG'CTG Cuts at: 0 503 512 1035 1395 1779 Size: 503 9 523 360 384 Fragments arranged by size: 523 503 384 360 9 SacI G_AGCT'C Cuts at: 0 1148 1204 1779 Size: 1148 56 575 Fragments arranged by size: 1148 575 56 SacII CC_GC'GG Cuts at: 0 1616 1779 Size: 1616 163 SapI GCTCTTCn'nnn_ Cuts at: 0 778 1192 1779 Size: 778 414 587 Fragments arranged by size: 778 587 414 SexAI A'CCwGG_T Cuts at: 0 1529 1779 Size: 1529 250 SfcI C'TryA_G Cuts at: 0 208 1630 1779 Size: 208 1422 149 Fragments arranged by size: 1422 208 149 SfoI GGC'GCC Cuts at: 0 36 309 1779 Size: 36 273 1470 Fragments arranged by size: 1470 273 36 SmlI C'TyrA_G Cuts at: 0 994 1779 Size: 994 785 StuI AGG'CCT Cuts at: 0 1312 1779 Size: 1312 467 StyI C'CwwG_G Cuts at: 0 10 1362 1779 Size: 10 1352 417 Fragments arranged by size: 1352 417 10 TaqII GACCGAnnnnnnnnn_nn' Cuts at: 0 1723 1779 Size: 1723 56 TatI w'GTAC_w Cuts at: 0 461 1779 Size: 461 1318 TstI CACnnnnnnTCCnnnnnnn_nnnnn' Cuts at: 0 1402 1434 1466 1498 1779 Size: 1402 32 32 32 281 Fragments arranged by size: 1402 281 32 32 32 Tth111I GACn'n_nGTC Cuts at: 0 1075 1779 Size: 1075 704 XcmI CCAnnnn_n'nnnnTGG Cuts at: 0 448 1779 Size: 448 1331 ZraI GAC'GTC Cuts at: 0 315 333 1779 Size: 315 18 1446 Fragments arranged by size: 1446 315 18 Enzymes that do cut: AarI AatII AccI AcuI AflIII AlfI AlwNI ApaI ApoI AvaI AvrII BanI BanII BbeI BbvCI BglI BglII BlpI Bme1580I BmrI BpmI Bpu10I BpuEI BsaI BsaAI BsaBI BsaHI BsaWI BsaXI BseRI BsgI BsiEI BsiHKAI BsmI Bsp1286I BspMI BsrBI BsrFI BstAPI BstXI BstYI BtgI DraIII EaeI EarI EciI EcoICRI Eco57MI EcoNI EcoO109I EcoRI FalI HaeII Hin4I HincII KasI MmeI MscI MslI MspA1I NaeI NarI NdeI NgoMIV NspI PciI PflMI PmlI PpuMI PshAI PspOMI PstI PvuII SacI SacII SapI SexAI SfcI SfoI SmlI StuI StyI TaqII TatI TstI Tth111I XcmI ZraI Enzymes that do not cut: Acc65I AclI AfeI AflII AgeI AhdI AleI AloI ApaLI AscI AseI AsiSI BaeI BamHI BbsI BcgI BciVI BclI BfrBI BmgBI BmtI BplI BseYI BsiWI BsmBI BspEI BspHI BsrDI BsrGI BssHII BssSI BstBI BstEII BstZ17I Bsu36I BtgZI BtsI ClaI CspCI DraI DrdI EagI EcoRV FseI FspI FspAI HindIII HpaI KpnI MfeI MluI NcoI NheI NotI NruI NsiI PacI PasI PfoI PmeI PpiI PsiI PspXI PsrI PvuI RsrII SalI SanDI SbfI ScaI SfiI SgfI SgrAI SmaI SnaBI SpeI SphI SrfI SspI SwaI XbaI XhoI XmaI XmnI