FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6585, 159 aa 1>>>pF1KE6585 159 - 159 aa - 159 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.0272+/-0.00128; mu= 12.4820+/- 0.077 mean_var=253.9956+/-48.110, 0's: 0 Z-trim(111.0): 133 B-trim: 0 in 0/51 Lambda= 0.080475 statistics sampled from 11881 (12015) to 11881 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.669), E-opt: 0.2 (0.369), width: 16 Scan time: 1.590 The best scores are: opt bits E(32554) CCDS11385.1 3 gene_id:83900|Hs108|chr17 ( 159) 1397 174.1 3.2e-44 CCDS42334.1 8 gene_id:83901|Hs108|chr17 ( 159) 1286 161.2 2.4e-40 CCDS11386.1 4 gene_id:85280|Hs108|chr17 ( 154) 1192 150.3 4.6e-37 CCDS56029.1 1 gene_id:728318|Hs108|chr17 ( 250) 1018 130.4 7.1e-31 CCDS54127.1 9 gene_id:81870|Hs108|chr17 ( 169) 967 124.2 3.5e-29 CCDS32651.1 2 gene_id:83899|Hs108|chr17 ( 174) 966 124.1 3.9e-29 CCDS59287.1 7 gene_id:100505724|Hs108|chr17 ( 169) 962 123.6 5.3e-29 CCDS59286.1 6 gene_id:100507608|Hs108|chr17 ( 160) 752 99.2 1.1e-21 CCDS54124.1 9 gene_id:100132386|Hs108|chr17 ( 210) 753 99.5 1.2e-21 CCDS54125.1 6 gene_id:81871|Hs108|chr17 ( 205) 714 95.0 2.7e-20 CCDS32649.1 12 gene_id:83755|Hs108|chr17 ( 201) 696 92.9 1.1e-19 CCDS32650.1 5 gene_id:85289|Hs108|chr17 ( 181) 676 90.5 5.4e-19 CCDS45675.1 11 gene_id:653240|Hs108|chr17 ( 195) 656 88.2 2.8e-18 CCDS11384.1 2 gene_id:85291|Hs108|chr17 ( 136) 620 83.8 4.3e-17 CCDS11383.1 4 gene_id:84616|Hs108|chr17 ( 166) 612 83.0 9e-17 CCDS45674.1 8 gene_id:728224|Hs108|chr17 ( 185) 608 82.6 1.3e-16 CCDS45673.1 7 gene_id:100132476|Hs108|chr17 ( 155) 591 80.5 4.7e-16 CCDS42958.1 5 gene_id:386680|Hs108|chr21 ( 271) 563 77.7 5.9e-15 CCDS42962.1 11 gene_id:386678|Hs108|chr21 ( 298) 562 77.6 6.7e-15 CCDS74803.1 7 gene_id:386675|Hs108|chr21 ( 370) 541 75.3 4e-14 CCDS42955.1 2 gene_id:386679|Hs108|chr21 ( 255) 534 74.2 5.9e-14 CCDS56032.1 1 gene_id:100505753|Hs108|chr17 ( 517) 514 72.5 4.1e-13 CCDS13713.1 8 gene_id:386681|Hs108|chr21 ( 259) 506 71.0 5.6e-13 CCDS42961.1 9 gene_id:386676|Hs108|chr21 ( 292) 504 70.9 7e-13 CCDS42967.1 12 gene_id:386685|Hs108|chr21 ( 245) 496 69.8 1.2e-12 CCDS42956.1 3 gene_id:386682|Hs108|chr21 ( 221) 484 68.3 3.1e-12 CCDS42331.1 3 gene_id:85290|Hs108|chr17 ( 195) 481 67.9 3.7e-12 CCDS42954.1 1 gene_id:386677|Hs108|chr21 ( 282) 475 67.5 7.1e-12 CCDS42957.1 4 gene_id:386672|Hs108|chr21 ( 401) 472 67.4 1.1e-11 CCDS33585.1 10 gene_id:353333|Hs108|chr21 ( 251) 462 65.9 1.9e-11 CCDS42959.1 6 gene_id:386674|Hs108|chr21 ( 365) 459 65.8 2.9e-11 CCDS41591.1 3 gene_id:387266|Hs108|chr11 ( 238) 455 65.0 3.3e-11 >>CCDS11385.1 3 gene_id:83900|Hs108|chr17 (159 aa) initn: 1397 init1: 1397 opt: 1397 Z-score: 907.3 bits: 174.1 E(32554): 3.2e-44 Smith-Waterman score: 1397; 100.0% identity (100.0% similar) in 159 aa overlap (1-159:1-159) 10 20 30 40 50 60 pF1KE6 MTHCCSPCCQPTCCRTTCWQPTTVTTCSSTPCCQPSCCVSSCCQPCCHPTCCQNTCCRTT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 MTHCCSPCCQPTCCRTTCWQPTTVTTCSSTPCCQPSCCVSSCCQPCCHPTCCQNTCCRTT 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 CCQPICVTSCCQPSCCSTPCCQPTCCGSSCGQSSSCAPVYCRRTCYHPTSVCLPGCLNQS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 CCQPICVTSCCQPSCCSTPCCQPTCCGSSCGQSSSCAPVYCRRTCYHPTSVCLPGCLNQS 70 80 90 100 110 120 130 140 150 pF1KE6 CGSNCCQPCCRPACCETTCCRTTCFQPTCVYSCCQPSCC ::::::::::::::::::::::::::::::::::::::: CCDS11 CGSNCCQPCCRPACCETTCCRTTCFQPTCVYSCCQPSCC 130 140 150 >>CCDS42334.1 8 gene_id:83901|Hs108|chr17 (159 aa) initn: 1217 init1: 1217 opt: 1286 Z-score: 837.7 bits: 161.2 E(32554): 2.4e-40 Smith-Waterman score: 1286; 91.5% identity (93.3% similar) in 164 aa overlap (1-159:1-159) 10 20 30 40 50 60 pF1KE6 MTHCCSPCCQPTCCRTTCWQPTTVTTCSSTPCCQPSCCVSSCCQPCCHPTCCQNTCCRTT :::::::::::::::::::.:::::::::::::::::::::::::::.:::::: : CCDS42 MTHCCSPCCQPTCCRTTCWKPTTVTTCSSTPCCQPSCCVSSCCQPCCRPTCCQN-----T 10 20 30 40 50 70 80 90 100 110 pF1KE6 CCQPICVTSCCQPSCCSTPCCQPTCCG-----SSCGQSSSCAPVYCRRTCYHPTSVCLPG ::::::::::::::::::::::::::: ::::::::::::::::::::::.::::: CCDS42 CCQPICVTSCCQPSCCSTPCCQPTCCGQTSCGSSCGQSSSCAPVYCRRTCYHPTTVCLPG 60 70 80 90 100 110 120 130 140 150 pF1KE6 CLNQSCGSNCCQPCCRPACCETTCCRTTCFQPTCVYSCCQPSCC ::::::::::::::::::::::::::::::::::: :::::::: CCDS42 CLNQSCGSNCCQPCCRPACCETTCCRTTCFQPTCVSSCCQPSCC 120 130 140 150 >>CCDS11386.1 4 gene_id:85280|Hs108|chr17 (154 aa) initn: 995 init1: 995 opt: 1192 Z-score: 778.8 bits: 150.3 E(32554): 4.6e-37 Smith-Waterman score: 1192; 86.0% identity (88.4% similar) in 164 aa overlap (1-159:1-154) 10 20 30 40 50 pF1KE6 MTHCCSPCCQPTCCRTTC-----WQPTTVTTCSSTPCCQPSCCVSSCCQPCCHPTCCQNT :::::::::::::::::: :.:::::::::::::::::::::::::::.:::::: CCDS11 MTHCCSPCCQPTCCRTTCCRTTCWKPTTVTTCSSTPCCQPSCCVSSCCQPCCRPTCCQN- 10 20 30 40 50 60 70 80 90 100 110 pF1KE6 CCRTTCCQPICVTSCCQPSCCSTPCCQPTCCGSSCGQSSSCAPVYCRRTCYHPTSVCLPG ::::: ::::::::::::::::::::::::: :::::::::::::::.::.::::: CCDS11 ----TCCQPTCVTSCCQPSCCSTPCCQPTCCGSSCDQSSSCAPVYCRRTCYYPTTVCLPG 60 70 80 90 100 110 120 130 140 150 pF1KE6 CLNQSCGSNCCQPCCRPACCETTCCRTTCFQPTCVYSCCQPSCC :::::::::::::::::::::::: :::::: ::::: :: CCDS11 CLNQSCGSNCCQPCCRPACCETTC-----FQPTCVSSCCQPFCC 120 130 140 150 >>CCDS56029.1 1 gene_id:728318|Hs108|chr17 (250 aa) initn: 794 init1: 794 opt: 1018 Z-score: 667.8 bits: 130.4 E(32554): 7.1e-31 Smith-Waterman score: 1032; 65.1% identity (72.4% similar) in 192 aa overlap (1-159:1-191) 10 20 30 40 50 pF1KE6 MTHCCSPCCQPTCCRTTC-----WQPTTVTTCSSTPCCQPSCCVSSCCQPCCHPTCCQNT :::::::::::::::::: :.::::::::::::::::::: ::::::::::::::: CCDS56 MTHCCSPCCQPTCCRTTCCRTTCWKPTTVTTCSSTPCCQPSCCVPSCCQPCCHPTCCQNT 10 20 30 40 50 60 60 70 80 90 100 pF1KE6 CCRTTCCQPICVTSCCQPSCCSTPCCQPTCCGSSC-GQ----SSSCAPV---YCRRTCYH ::::::::: ::.:::::::::::::::::::::: :: :: : :. : . : : CCDS56 CCRTTCCQPTCVASCCQPSCCSTPCCQPTCCGSSCCGQTSCGSSCCQPICGSSCCQPCCH 70 80 90 100 110 120 110 120 130 140 pF1KE6 PT---------SVCLPGCLNQSC-----------GSNCCQPCCRPACCETTCCRTTCFQP :: . : : : . .: ::.::::::.:.::.: : :.:: :: CCDS56 PTCYQTICFRTTCCQPTCCQPTCCRNTSCQPTCCGSSCCQPCCHPTCCQTIC-RSTCCQP 130 140 150 160 170 150 pF1KE6 TCVYSCCQPSCC .:: ::. :: CCDS56 SCVTRCCSTPCCQPTCGGSSCCSQTCNESSYCLPCCRPTCCQTTCYRTTCCRPSCCCSPC 180 190 200 210 220 230 >>CCDS54127.1 9 gene_id:81870|Hs108|chr17 (169 aa) initn: 1151 init1: 887 opt: 967 Z-score: 637.3 bits: 124.2 E(32554): 3.5e-29 Smith-Waterman score: 1293; 87.6% identity (91.7% similar) in 169 aa overlap (1-159:1-169) 10 20 30 40 50 60 pF1KE6 MTHCCSPCCQPTCCRTTCWQPTTVTTCSSTPCCQPSCCVSSCCQPCCHPTCCQNTCCRTT :::::::::::::::::::.:::::::::::::::::::::::::::.:.:::::::::: CCDS54 MTHCCSPCCQPTCCRTTCWKPTTVTTCSSTPCCQPSCCVSSCCQPCCRPACCQNTCCRTT 10 20 30 40 50 60 70 80 90 100 110 pF1KE6 CCQPICVTSCCQPSCCSTPCCQPTCCGSSC----------GQSSSCAPVYCRRTCYHPTS :::: :.::::::::::: :::: :::::: ::::::::::::::::.::. CCDS54 CCQPTCLTSCCQPSCCSTTCCQPICCGSSCCGQTSCGSSCGQSSSCAPVYCRRTCYYPTT 70 80 90 100 110 120 120 130 140 150 pF1KE6 VCLPGCLNQSCGSNCCQPCCRPACCETTCCRTTCFQPTCVYSCCQPSCC :::::::::::::.:::::::::::::::::::::::::: :::::::: CCDS54 VCLPGCLNQSCGSSCCQPCCRPACCETTCCRTTCFQPTCVSSCCQPSCC 130 140 150 160 >>CCDS32651.1 2 gene_id:83899|Hs108|chr17 (174 aa) initn: 1562 init1: 895 opt: 966 Z-score: 636.6 bits: 124.1 E(32554): 3.9e-29 Smith-Waterman score: 1301; 87.4% identity (90.2% similar) in 174 aa overlap (1-159:1-174) 10 20 30 40 50 pF1KE6 MTHCCSPCCQPTCCRTTC-----WQPTTVTTCSSTPCCQPSCCVSSCCQPCCHPTCCQNT :::::::::::::::::: :.:::::::::::::::.:::::::::::.::::::: CCDS32 MTHCCSPCCQPTCCRTTCCRTTCWKPTTVTTCSSTPCCQPACCVSSCCQPCCRPTCCQNT 10 20 30 40 50 60 60 70 80 90 100 pF1KE6 CCRTTCCQPICVTSCCQPSCCSTPCCQPTCCGSSC----------GQSSSCAPVYCRRTC ::::::::: ::::::::::::::::::::::::: ::::::::::::::: CCDS32 CCRTTCCQPTCVTSCCQPSCCSTPCCQPTCCGSSCCGQTSCGSSCGQSSSCAPVYCRRTC 70 80 90 100 110 120 110 120 130 140 150 pF1KE6 YHPTSVCLPGCLNQSCGSNCCQPCCRPACCETTCCRTTCFQPTCVYSCCQPSCC :.::.:::::::::::::::::::::::::::::::::::::::: :::::::: CCDS32 YYPTTVCLPGCLNQSCGSNCCQPCCRPACCETTCCRTTCFQPTCVSSCCQPSCC 130 140 150 160 170 >>CCDS59287.1 7 gene_id:100505724|Hs108|chr17 (169 aa) initn: 1513 init1: 867 opt: 962 Z-score: 634.2 bits: 123.6 E(32554): 5.3e-29 Smith-Waterman score: 1300; 88.8% identity (91.7% similar) in 169 aa overlap (1-159:1-169) 10 20 30 40 50 60 pF1KE6 MTHCCSPCCQPTCCRTTCWQPTTVTTCSSTPCCQPSCCVSSCCQPCCHPTCCQNTCCRTT :::::::::::::::::::.:::::::::::::::::::::::::::::::::::::::: CCDS59 MTHCCSPCCQPTCCRTTCWKPTTVTTCSSTPCCQPSCCVSSCCQPCCHPTCCQNTCCRTT 10 20 30 40 50 60 70 80 90 100 110 pF1KE6 CCQPICVTSCCQPSCCSTPCCQPTCCGSSC-GQSS---------SCAPVYCRRTCYHPTS :::: :::::::::::::::::: :::::: ::.: ::::.::::::::::: CCDS59 CCQPTCVTSCCQPSCCSTPCCQPICCGSSCCGQTSCGSSCCQPSSCAPIYCRRTCYHPTS 70 80 90 100 110 120 120 130 140 150 pF1KE6 VCLPGCLNQSCGSNCCQPCCRPACCETTCCRTTCFQPTCVYSCCQPSCC : :::::::::::.:::::::::::::::::::::::::: :::::.:: CCDS59 VYLPGCLNQSCGSSCCQPCCRPACCETTCCRTTCFQPTCVTSCCQPACC 130 140 150 160 >>CCDS59286.1 6 gene_id:100507608|Hs108|chr17 (160 aa) initn: 2461 init1: 699 opt: 752 Z-score: 502.6 bits: 99.2 E(32554): 1.1e-21 Smith-Waterman score: 1079; 80.5% identity (84.3% similar) in 159 aa overlap (1-144:1-159) 10 20 30 40 50 pF1KE6 MTHCCSPCCQPTCCRTTC-----WQPTTVTTCSSTPCCQPSCCVSSCCQPCCHPTCCQNT ::::::: :::::::::: :::: :::::::::::::::::::::: ::::::::: CCDS59 MTHCCSPGCQPTCCRTTCCRTTCWQPTIVTTCSSTPCCQPSCCVSSCCQPYCHPTCCQNT 10 20 30 40 50 60 60 70 80 90 100 pF1KE6 CCRTTCCQPICVTSCCQPSCCSTPCCQPTCCGSSC----------GQSSSCAPVYCRRTC ::::::::: ::::::::::::::: :: :::::: ::::::::::::::: CCDS59 CCRTTCCQPTCVTSCCQPSCCSTPCYQPICCGSSCCGQTSCGSSCGQSSSCAPVYCRRTC 70 80 90 100 110 120 110 120 130 140 150 pF1KE6 YHPTSVCLPGCLNQSCGSNCCQPCCRPACCETTCCRTTCFQPTCVYSCCQPSCC ::::.:::::::::::::.::::: :::: ..::. .: CCDS59 YHPTTVCLPGCLNQSCGSSCCQPCYCPACCVSSCCQHSCC 130 140 150 160 >>CCDS54124.1 9 gene_id:100132386|Hs108|chr17 (210 aa) initn: 1523 init1: 294 opt: 753 Z-score: 502.2 bits: 99.5 E(32554): 1.2e-21 Smith-Waterman score: 753; 52.8% identity (69.6% similar) in 161 aa overlap (4-159:24-175) 10 20 30 pF1KE6 MTHCCSP-CCQPTCCRTTCWQPTTVTTCSSTPCCQPSCCV :: : ::. ::::::: .:. : . ::.:.:: CCDS54 MVSSCCGSVCSDQGCGQDLCQETCCRPSCCETTCCRTTCCRPS----CCVSSCCRPQCCQ 10 20 30 40 50 40 50 60 70 80 90 pF1KE6 SSCCQPCC-HPTCCQNTCCRTTCCQP-ICVTSCCQPSCCSTPCCQPTCCGSSCGQSSSCA : :::: : .:.:::.::::::: .: ::.:::.:.::. ::::::: :: ... : CCDS54 SVCCQPTCSRPSCCQTTCCRTTCYRPSCCVSSCCRPQCCQPACCQPTCCRPSCCETTCCH 60 70 80 90 100 110 100 110 120 130 140 150 pF1KE6 PVYCRRTCYHPTSVCLPGCLN-QSCGSNCCQP-CCRPACCETTCCRTTCFQPTCVYSCCQ : : .: .: : :. .: . : : : :::: ::::.: ..::: .: : :::. CCDS54 PRCCISSCCRP-SCCVSSCCKPQCCQSVCCQPNCCRPSCSISSCCRPSC----CESSCCR 120 130 140 150 160 170 pF1KE6 PSCC : :: CCDS54 PCCCVRPVCGRVSCHTTCYRPTCVISSCPRPLCCASSCC 180 190 200 210 >>CCDS54125.1 6 gene_id:81871|Hs108|chr17 (205 aa) initn: 1406 init1: 388 opt: 714 Z-score: 477.8 bits: 95.0 E(32554): 2.7e-20 Smith-Waterman score: 772; 52.8% identity (67.1% similar) in 161 aa overlap (4-159:20-170) 10 20 30 40 pF1KE6 MTHCCSP-CCQPTCCRTTCWQPTT-VTTCSSTPCCQPSCCVSSC :: : ::: ::::::: .:. :..: ::: :: .: CCDS54 MVSSCCGSVCSDQGCGLETCCRPSCCQTTCCRTTCCRPSCCVSSCCRPQCCQSVCCQPTC 10 20 30 40 50 60 50 60 70 80 90 100 pF1KE6 CQPCCHPTCCQNTCCRTTCCQP-ICVTSCCQPSCCSTPCCQPTCCGSSCGQSSSCAPVYC :.: : :.:::.::::::::.: ::.:::.:.::.. ::::::: ::. :: : : : CCDS54 CRPSCCPSCCQTTCCRTTCCRPSCCVSSCCRPQCCQSVCCQPTCCRPSCSISSCCRPSCC 70 80 90 100 110 120 110 120 130 140 150 pF1KE6 RRTCYHPTSVCLPGCLNQSCGSNCCQP-CCRPACCETTCCRTTCFQPTCVYSCC-QPSCC : : .: : : :::: ::::.:: ..::: .: . .: :: .: :: CCDS54 VSRC----------CRSQCCQSVCCQPTCCRPSCCISSCCRPSCCESSCCRPCCCRPCCC 130 140 150 160 170 CCDS54 LRPVCGRVSCHTTCYRPTCVISTCPRPLCCASSCC 180 190 200 159 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 14:35:38 2016 done: Tue Nov 8 14:35:38 2016 Total Scan time: 1.590 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]