FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6503, 153 aa 1>>>pF1KE6503 153 - 153 aa - 153 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 4.7627+/-0.000446; mu= 14.4325+/- 0.027 mean_var=53.8038+/-11.285, 0's: 0 Z-trim(109.4): 17 B-trim: 1033 in 2/46 Lambda= 0.174851 statistics sampled from 17583 (17600) to 17583 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.568), E-opt: 0.2 (0.206), width: 16 Scan time: 4.610 The best scores are: opt bits E(85289) NP_001307730 (OMIM: 610075) ORM1-like protein 3 [H ( 153) 1011 263.0 1.4e-70 XP_016880836 (OMIM: 610075) PREDICTED: ORM1-like p ( 153) 1011 263.0 1.4e-70 NP_001307731 (OMIM: 610075) ORM1-like protein 3 [H ( 153) 1011 263.0 1.4e-70 XP_016880837 (OMIM: 610075) PREDICTED: ORM1-like p ( 153) 1011 263.0 1.4e-70 NP_644809 (OMIM: 610075) ORM1-like protein 3 [Homo ( 153) 1011 263.0 1.4e-70 XP_016880835 (OMIM: 610075) PREDICTED: ORM1-like p ( 153) 1011 263.0 1.4e-70 NP_001307732 (OMIM: 610075) ORM1-like protein 3 [H ( 153) 1011 263.0 1.4e-70 XP_016880834 (OMIM: 610075) PREDICTED: ORM1-like p ( 171) 1011 263.0 1.5e-70 NP_057551 (OMIM: 610073) ORM1-like protein 1 [Homo ( 153) 918 239.5 1.6e-63 NP_001121622 (OMIM: 610073) ORM1-like protein 1 [H ( 153) 918 239.5 1.6e-63 XP_016860836 (OMIM: 610073) PREDICTED: ORM1-like p ( 153) 918 239.5 1.6e-63 XP_005247027 (OMIM: 610073) PREDICTED: ORM1-like p ( 153) 918 239.5 1.6e-63 NP_054901 (OMIM: 610074) ORM1-like protein 2 [Homo ( 153) 891 232.7 1.8e-61 XP_011510502 (OMIM: 610073) PREDICTED: ORM1-like p ( 111) 663 175.1 2.8e-44 XP_011510501 (OMIM: 610073) PREDICTED: ORM1-like p ( 115) 661 174.6 4.1e-44 XP_016860837 (OMIM: 610073) PREDICTED: ORM1-like p ( 115) 661 174.6 4.1e-44 >>NP_001307730 (OMIM: 610075) ORM1-like protein 3 [Homo (153 aa) initn: 1011 init1: 1011 opt: 1011 Z-score: 1388.3 bits: 263.0 E(85289): 1.4e-70 Smith-Waterman score: 1011; 100.0% identity (100.0% similar) in 153 aa overlap (1-153:1-153) 10 20 30 40 50 60 pF1KE6 MNVGTAHSEVNPNTRVMNSRGIWLSYVLAIGLLHIVLLSIPFVSVPVVWTLTNLIHNMGM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MNVGTAHSEVNPNTRVMNSRGIWLSYVLAIGLLHIVLLSIPFVSVPVVWTLTNLIHNMGM 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 YIFLHTVKGTPFETPDQGKARLLTHWEQMDYGVQFTASRKFLTITPIVLYFLTSFYTKYD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 YIFLHTVKGTPFETPDQGKARLLTHWEQMDYGVQFTASRKFLTITPIVLYFLTSFYTKYD 70 80 90 100 110 120 130 140 150 pF1KE6 QIHFVLNTVSLMSVLIPKLPQLHGVRIFGINKY ::::::::::::::::::::::::::::::::: NP_001 QIHFVLNTVSLMSVLIPKLPQLHGVRIFGINKY 130 140 150 >>XP_016880836 (OMIM: 610075) PREDICTED: ORM1-like prote (153 aa) initn: 1011 init1: 1011 opt: 1011 Z-score: 1388.3 bits: 263.0 E(85289): 1.4e-70 Smith-Waterman score: 1011; 100.0% identity (100.0% similar) in 153 aa overlap (1-153:1-153) 10 20 30 40 50 60 pF1KE6 MNVGTAHSEVNPNTRVMNSRGIWLSYVLAIGLLHIVLLSIPFVSVPVVWTLTNLIHNMGM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 MNVGTAHSEVNPNTRVMNSRGIWLSYVLAIGLLHIVLLSIPFVSVPVVWTLTNLIHNMGM 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 YIFLHTVKGTPFETPDQGKARLLTHWEQMDYGVQFTASRKFLTITPIVLYFLTSFYTKYD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 YIFLHTVKGTPFETPDQGKARLLTHWEQMDYGVQFTASRKFLTITPIVLYFLTSFYTKYD 70 80 90 100 110 120 130 140 150 pF1KE6 QIHFVLNTVSLMSVLIPKLPQLHGVRIFGINKY ::::::::::::::::::::::::::::::::: XP_016 QIHFVLNTVSLMSVLIPKLPQLHGVRIFGINKY 130 140 150 >>NP_001307731 (OMIM: 610075) ORM1-like protein 3 [Homo (153 aa) initn: 1011 init1: 1011 opt: 1011 Z-score: 1388.3 bits: 263.0 E(85289): 1.4e-70 Smith-Waterman score: 1011; 100.0% identity (100.0% similar) in 153 aa overlap (1-153:1-153) 10 20 30 40 50 60 pF1KE6 MNVGTAHSEVNPNTRVMNSRGIWLSYVLAIGLLHIVLLSIPFVSVPVVWTLTNLIHNMGM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MNVGTAHSEVNPNTRVMNSRGIWLSYVLAIGLLHIVLLSIPFVSVPVVWTLTNLIHNMGM 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 YIFLHTVKGTPFETPDQGKARLLTHWEQMDYGVQFTASRKFLTITPIVLYFLTSFYTKYD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 YIFLHTVKGTPFETPDQGKARLLTHWEQMDYGVQFTASRKFLTITPIVLYFLTSFYTKYD 70 80 90 100 110 120 130 140 150 pF1KE6 QIHFVLNTVSLMSVLIPKLPQLHGVRIFGINKY ::::::::::::::::::::::::::::::::: NP_001 QIHFVLNTVSLMSVLIPKLPQLHGVRIFGINKY 130 140 150 >>XP_016880837 (OMIM: 610075) PREDICTED: ORM1-like prote (153 aa) initn: 1011 init1: 1011 opt: 1011 Z-score: 1388.3 bits: 263.0 E(85289): 1.4e-70 Smith-Waterman score: 1011; 100.0% identity (100.0% similar) in 153 aa overlap (1-153:1-153) 10 20 30 40 50 60 pF1KE6 MNVGTAHSEVNPNTRVMNSRGIWLSYVLAIGLLHIVLLSIPFVSVPVVWTLTNLIHNMGM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 MNVGTAHSEVNPNTRVMNSRGIWLSYVLAIGLLHIVLLSIPFVSVPVVWTLTNLIHNMGM 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 YIFLHTVKGTPFETPDQGKARLLTHWEQMDYGVQFTASRKFLTITPIVLYFLTSFYTKYD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 YIFLHTVKGTPFETPDQGKARLLTHWEQMDYGVQFTASRKFLTITPIVLYFLTSFYTKYD 70 80 90 100 110 120 130 140 150 pF1KE6 QIHFVLNTVSLMSVLIPKLPQLHGVRIFGINKY ::::::::::::::::::::::::::::::::: XP_016 QIHFVLNTVSLMSVLIPKLPQLHGVRIFGINKY 130 140 150 >>NP_644809 (OMIM: 610075) ORM1-like protein 3 [Homo sap (153 aa) initn: 1011 init1: 1011 opt: 1011 Z-score: 1388.3 bits: 263.0 E(85289): 1.4e-70 Smith-Waterman score: 1011; 100.0% identity (100.0% similar) in 153 aa overlap (1-153:1-153) 10 20 30 40 50 60 pF1KE6 MNVGTAHSEVNPNTRVMNSRGIWLSYVLAIGLLHIVLLSIPFVSVPVVWTLTNLIHNMGM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_644 MNVGTAHSEVNPNTRVMNSRGIWLSYVLAIGLLHIVLLSIPFVSVPVVWTLTNLIHNMGM 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 YIFLHTVKGTPFETPDQGKARLLTHWEQMDYGVQFTASRKFLTITPIVLYFLTSFYTKYD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_644 YIFLHTVKGTPFETPDQGKARLLTHWEQMDYGVQFTASRKFLTITPIVLYFLTSFYTKYD 70 80 90 100 110 120 130 140 150 pF1KE6 QIHFVLNTVSLMSVLIPKLPQLHGVRIFGINKY ::::::::::::::::::::::::::::::::: NP_644 QIHFVLNTVSLMSVLIPKLPQLHGVRIFGINKY 130 140 150 >>XP_016880835 (OMIM: 610075) PREDICTED: ORM1-like prote (153 aa) initn: 1011 init1: 1011 opt: 1011 Z-score: 1388.3 bits: 263.0 E(85289): 1.4e-70 Smith-Waterman score: 1011; 100.0% identity (100.0% similar) in 153 aa overlap (1-153:1-153) 10 20 30 40 50 60 pF1KE6 MNVGTAHSEVNPNTRVMNSRGIWLSYVLAIGLLHIVLLSIPFVSVPVVWTLTNLIHNMGM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 MNVGTAHSEVNPNTRVMNSRGIWLSYVLAIGLLHIVLLSIPFVSVPVVWTLTNLIHNMGM 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 YIFLHTVKGTPFETPDQGKARLLTHWEQMDYGVQFTASRKFLTITPIVLYFLTSFYTKYD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 YIFLHTVKGTPFETPDQGKARLLTHWEQMDYGVQFTASRKFLTITPIVLYFLTSFYTKYD 70 80 90 100 110 120 130 140 150 pF1KE6 QIHFVLNTVSLMSVLIPKLPQLHGVRIFGINKY ::::::::::::::::::::::::::::::::: XP_016 QIHFVLNTVSLMSVLIPKLPQLHGVRIFGINKY 130 140 150 >>NP_001307732 (OMIM: 610075) ORM1-like protein 3 [Homo (153 aa) initn: 1011 init1: 1011 opt: 1011 Z-score: 1388.3 bits: 263.0 E(85289): 1.4e-70 Smith-Waterman score: 1011; 100.0% identity (100.0% similar) in 153 aa overlap (1-153:1-153) 10 20 30 40 50 60 pF1KE6 MNVGTAHSEVNPNTRVMNSRGIWLSYVLAIGLLHIVLLSIPFVSVPVVWTLTNLIHNMGM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MNVGTAHSEVNPNTRVMNSRGIWLSYVLAIGLLHIVLLSIPFVSVPVVWTLTNLIHNMGM 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 YIFLHTVKGTPFETPDQGKARLLTHWEQMDYGVQFTASRKFLTITPIVLYFLTSFYTKYD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 YIFLHTVKGTPFETPDQGKARLLTHWEQMDYGVQFTASRKFLTITPIVLYFLTSFYTKYD 70 80 90 100 110 120 130 140 150 pF1KE6 QIHFVLNTVSLMSVLIPKLPQLHGVRIFGINKY ::::::::::::::::::::::::::::::::: NP_001 QIHFVLNTVSLMSVLIPKLPQLHGVRIFGINKY 130 140 150 >>XP_016880834 (OMIM: 610075) PREDICTED: ORM1-like prote (171 aa) initn: 1011 init1: 1011 opt: 1011 Z-score: 1387.5 bits: 263.0 E(85289): 1.5e-70 Smith-Waterman score: 1011; 100.0% identity (100.0% similar) in 153 aa overlap (1-153:19-171) 10 20 30 40 pF1KE6 MNVGTAHSEVNPNTRVMNSRGIWLSYVLAIGLLHIVLLSIPF :::::::::::::::::::::::::::::::::::::::::: XP_016 MFCAPLPEDRRTAERGSRMNVGTAHSEVNPNTRVMNSRGIWLSYVLAIGLLHIVLLSIPF 10 20 30 40 50 60 50 60 70 80 90 100 pF1KE6 VSVPVVWTLTNLIHNMGMYIFLHTVKGTPFETPDQGKARLLTHWEQMDYGVQFTASRKFL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 VSVPVVWTLTNLIHNMGMYIFLHTVKGTPFETPDQGKARLLTHWEQMDYGVQFTASRKFL 70 80 90 100 110 120 110 120 130 140 150 pF1KE6 TITPIVLYFLTSFYTKYDQIHFVLNTVSLMSVLIPKLPQLHGVRIFGINKY ::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 TITPIVLYFLTSFYTKYDQIHFVLNTVSLMSVLIPKLPQLHGVRIFGINKY 130 140 150 160 170 >>NP_057551 (OMIM: 610073) ORM1-like protein 1 [Homo sap (153 aa) initn: 918 init1: 918 opt: 918 Z-score: 1261.5 bits: 239.5 E(85289): 1.6e-63 Smith-Waterman score: 918; 84.3% identity (98.0% similar) in 153 aa overlap (1-153:1-153) 10 20 30 40 50 60 pF1KE6 MNVGTAHSEVNPNTRVMNSRGIWLSYVLAIGLLHIVLLSIPFVSVPVVWTLTNLIHNMGM ::::.::::::::::::::::.::.:.:..:::::::::::: ::::.:::::.:::.:: NP_057 MNVGVAHSEVNPNTRVMNSRGMWLTYALGVGLLHIVLLSIPFFSVPVAWTLTNIIHNLGM 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 YIFLHTVKGTPFETPDQGKARLLTHWEQMDYGVQFTASRKFLTITPIVLYFLTSFYTKYD :.:::.::::::::::::::::::::::.:::::::.::::.::.::.::::.::::::: NP_057 YVFLHAVKGTPFETPDQGKARLLTHWEQLDYGVQFTSSRKFFTISPIILYFLASFYTKYD 70 80 90 100 110 120 130 140 150 pF1KE6 QIHFVLNTVSLMSVLIPKLPQLHGVRIFGINKY ::.:::.::.::::::.:::::::::::::: NP_057 PTHFILNTASLLSVLIPKMPQLHGVRIFGINKY 130 140 150 >>NP_001121622 (OMIM: 610073) ORM1-like protein 1 [Homo (153 aa) initn: 918 init1: 918 opt: 918 Z-score: 1261.5 bits: 239.5 E(85289): 1.6e-63 Smith-Waterman score: 918; 84.3% identity (98.0% similar) in 153 aa overlap (1-153:1-153) 10 20 30 40 50 60 pF1KE6 MNVGTAHSEVNPNTRVMNSRGIWLSYVLAIGLLHIVLLSIPFVSVPVVWTLTNLIHNMGM ::::.::::::::::::::::.::.:.:..:::::::::::: ::::.:::::.:::.:: NP_001 MNVGVAHSEVNPNTRVMNSRGMWLTYALGVGLLHIVLLSIPFFSVPVAWTLTNIIHNLGM 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 YIFLHTVKGTPFETPDQGKARLLTHWEQMDYGVQFTASRKFLTITPIVLYFLTSFYTKYD :.:::.::::::::::::::::::::::.:::::::.::::.::.::.::::.::::::: NP_001 YVFLHAVKGTPFETPDQGKARLLTHWEQLDYGVQFTSSRKFFTISPIILYFLASFYTKYD 70 80 90 100 110 120 130 140 150 pF1KE6 QIHFVLNTVSLMSVLIPKLPQLHGVRIFGINKY ::.:::.::.::::::.:::::::::::::: NP_001 PTHFILNTASLLSVLIPKMPQLHGVRIFGINKY 130 140 150 153 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 13:54:26 2016 done: Tue Nov 8 13:54:26 2016 Total Scan time: 4.610 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]