FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6503, 153 aa 1>>>pF1KE6503 153 - 153 aa - 153 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.0402+/-0.000982; mu= 12.8806+/- 0.059 mean_var=53.2104+/-11.022, 0's: 0 Z-trim(103.3): 13 B-trim: 68 in 1/47 Lambda= 0.175823 statistics sampled from 7340 (7343) to 7340 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.594), E-opt: 0.2 (0.226), width: 16 Scan time: 1.250 The best scores are: opt bits E(32554) CCDS11355.1 ORMDL3 gene_id:94103|Hs108|chr17 ( 153) 1011 264.2 2.2e-71 CCDS2301.1 ORMDL1 gene_id:94101|Hs108|chr2 ( 153) 918 240.7 2.7e-64 CCDS8893.1 ORMDL2 gene_id:29095|Hs108|chr12 ( 153) 891 233.8 3.2e-62 >>CCDS11355.1 ORMDL3 gene_id:94103|Hs108|chr17 (153 aa) initn: 1011 init1: 1011 opt: 1011 Z-score: 1395.2 bits: 264.2 E(32554): 2.2e-71 Smith-Waterman score: 1011; 100.0% identity (100.0% similar) in 153 aa overlap (1-153:1-153) 10 20 30 40 50 60 pF1KE6 MNVGTAHSEVNPNTRVMNSRGIWLSYVLAIGLLHIVLLSIPFVSVPVVWTLTNLIHNMGM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 MNVGTAHSEVNPNTRVMNSRGIWLSYVLAIGLLHIVLLSIPFVSVPVVWTLTNLIHNMGM 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 YIFLHTVKGTPFETPDQGKARLLTHWEQMDYGVQFTASRKFLTITPIVLYFLTSFYTKYD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 YIFLHTVKGTPFETPDQGKARLLTHWEQMDYGVQFTASRKFLTITPIVLYFLTSFYTKYD 70 80 90 100 110 120 130 140 150 pF1KE6 QIHFVLNTVSLMSVLIPKLPQLHGVRIFGINKY ::::::::::::::::::::::::::::::::: CCDS11 QIHFVLNTVSLMSVLIPKLPQLHGVRIFGINKY 130 140 150 >>CCDS2301.1 ORMDL1 gene_id:94101|Hs108|chr2 (153 aa) initn: 918 init1: 918 opt: 918 Z-score: 1267.7 bits: 240.7 E(32554): 2.7e-64 Smith-Waterman score: 918; 84.3% identity (98.0% similar) in 153 aa overlap (1-153:1-153) 10 20 30 40 50 60 pF1KE6 MNVGTAHSEVNPNTRVMNSRGIWLSYVLAIGLLHIVLLSIPFVSVPVVWTLTNLIHNMGM ::::.::::::::::::::::.::.:.:..:::::::::::: ::::.:::::.:::.:: CCDS23 MNVGVAHSEVNPNTRVMNSRGMWLTYALGVGLLHIVLLSIPFFSVPVAWTLTNIIHNLGM 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 YIFLHTVKGTPFETPDQGKARLLTHWEQMDYGVQFTASRKFLTITPIVLYFLTSFYTKYD :.:::.::::::::::::::::::::::.:::::::.::::.::.::.::::.::::::: CCDS23 YVFLHAVKGTPFETPDQGKARLLTHWEQLDYGVQFTSSRKFFTISPIILYFLASFYTKYD 70 80 90 100 110 120 130 140 150 pF1KE6 QIHFVLNTVSLMSVLIPKLPQLHGVRIFGINKY ::.:::.::.::::::.:::::::::::::: CCDS23 PTHFILNTASLLSVLIPKMPQLHGVRIFGINKY 130 140 150 >>CCDS8893.1 ORMDL2 gene_id:29095|Hs108|chr12 (153 aa) initn: 891 init1: 891 opt: 891 Z-score: 1230.7 bits: 233.8 E(32554): 3.2e-62 Smith-Waterman score: 891; 81.0% identity (96.7% similar) in 153 aa overlap (1-153:1-153) 10 20 30 40 50 60 pF1KE6 MNVGTAHSEVNPNTRVMNSRGIWLSYVLAIGLLHIVLLSIPFVSVPVVWTLTNLIHNMGM ::::.:::::::::::::::::::.:.. .::::.::::::: :.::::::::.:::.. CCDS88 MNVGVAHSEVNPNTRVMNSRGIWLAYIILVGLLHMVLLSIPFFSIPVVWTLTNVIHNLAT 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 YIFLHTVKGTPFETPDQGKARLLTHWEQMDYGVQFTASRKFLTITPIVLYFLTSFYTKYD :.::::::::::::::::::::::::::::::.:::.:::::.:.:::::.:.::::::: CCDS88 YVFLHTVKGTPFETPDQGKARLLTHWEQMDYGLQFTSSRKFLSISPIVLYLLASFYTKYD 70 80 90 100 110 120 130 140 150 pF1KE6 QIHFVLNTVSLMSVLIPKLPQLHGVRIFGINKY ::..::.::.:::.:::::.::::.:::::: CCDS88 AAHFLINTASLLSVLLPKLPQFHGVRVFGINKY 130 140 150 153 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 13:54:25 2016 done: Tue Nov 8 13:54:25 2016 Total Scan time: 1.250 Total Display time: -0.030 Function used was FASTA [36.3.4 Apr, 2011]