FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1775, 282 aa 1>>>pF1KE1775 282 - 282 aa - 282 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.0848+/-0.000697; mu= 17.6832+/- 0.042 mean_var=75.3109+/-15.521, 0's: 0 Z-trim(111.6): 15 B-trim: 1063 in 2/50 Lambda= 0.147790 statistics sampled from 12476 (12487) to 12476 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.744), E-opt: 0.2 (0.384), width: 16 Scan time: 2.670 The best scores are: opt bits E(32554) CCDS11343.1 PNMT gene_id:5409|Hs108|chr17 ( 282) 1928 419.7 1.2e-117 CCDS5430.1 INMT gene_id:11185|Hs108|chr7 ( 263) 602 136.9 1.4e-32 CCDS56479.1 INMT gene_id:11185|Hs108|chr7 ( 262) 593 135.0 5.5e-32 CCDS8368.1 NNMT gene_id:4837|Hs108|chr11 ( 264) 592 134.8 6.4e-32 >>CCDS11343.1 PNMT gene_id:5409|Hs108|chr17 (282 aa) initn: 1928 init1: 1928 opt: 1928 Z-score: 2225.7 bits: 419.7 E(32554): 1.2e-117 Smith-Waterman score: 1928; 100.0% identity (100.0% similar) in 282 aa overlap (1-282:1-282) 10 20 30 40 50 60 pF1KE1 MSGADRSPNAGAAPDSAPGQAAVASAYQRFEPRAYLRNNYAPPRGDLCNPNGVGPWKLRC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 MSGADRSPNAGAAPDSAPGQAAVASAYQRFEPRAYLRNNYAPPRGDLCNPNGVGPWKLRC 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 LAQTFATGEVSGRTLIDIGSGPTVYQLLSACSHFEDITMTDFLEVNRQELGRWLQEEPGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 LAQTFATGEVSGRTLIDIGSGPTVYQLLSACSHFEDITMTDFLEVNRQELGRWLQEEPGA 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 FNWSMYSQHACLIEGKGECWQDKERQLRARVKRVLPIDVHQPQPLGAGSPAPLPADALVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 FNWSMYSQHACLIEGKGECWQDKERQLRARVKRVLPIDVHQPQPLGAGSPAPLPADALVS 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 AFCLEAVSPDLASFQRALDHITTLLRPGGHLLLIGALEESWYLAGEARLTVVPVSEEEVR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 AFCLEAVSPDLASFQRALDHITTLLRPGGHLLLIGALEESWYLAGEARLTVVPVSEEEVR 190 200 210 220 230 240 250 260 270 280 pF1KE1 EALVRSGYKVRDLRTYIMPAHLQTGVDDVKGVFFAWAQKVGL :::::::::::::::::::::::::::::::::::::::::: CCDS11 EALVRSGYKVRDLRTYIMPAHLQTGVDDVKGVFFAWAQKVGL 250 260 270 280 >>CCDS5430.1 INMT gene_id:11185|Hs108|chr7 (263 aa) initn: 566 init1: 429 opt: 602 Z-score: 698.1 bits: 136.9 E(32554): 1.4e-32 Smith-Waterman score: 602; 39.2% identity (70.6% similar) in 255 aa overlap (27-279:11-259) 10 20 30 40 50 pF1KE1 MSGADRSPNAGAAPDSAPGQAAVASAYQR-FEPRAYLRNNYAPPRGDLCNPNGVGPWKLR ::. : :: :: . :. :. . ..:. CCDS54 MKGGFTGGDEYQKHFLPRDYLATYYSFD-GSPSPEAEMLKFNLE 10 20 30 40 60 70 80 90 100 110 pF1KE1 CLAQTFATGEVSGRTLIDIGSGPTVYQLLSACSHFEDITMTDFLEVNRQELGRWLQEEPG :: .::. : ..: ::::::::::.::.:.::. :.:::..:: . ::.:: .::..::: CCDS54 CLHKTFGPGGLQGDTLIDIGSGPTIYQVLAACDSFQDITLSDFTDRNREELEKWLKKEPG 50 60 70 80 90 100 120 130 140 150 160 170 pF1KE1 AFNWSMYSQHACLIEGKGECWQDKERQLRARVKRVLPIDVHQPQPLGAGSPAPLP-ADAL :..:. . :: .::.. :..::..::: ::::: ::: .:: .:: :: :: . CCDS54 AYDWTPAVKFACELEGNSGRWEEKEEKLRAAVKRVLKCDVHLGNPL---APAVLPLADCV 110 120 130 140 150 160 180 190 200 210 220 230 pF1KE1 VSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLIGALEESWYLAGEARLTVVPVSEEE .. . .: . .: ... :: ....::.:::::. .:. :..:. ... : . .:: CCDS54 LTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTTVTLRLPSYMVGKREFSCVALEKEE 170 180 190 200 210 220 240 250 260 270 280 pF1KE1 VREALVRSGYKVRDLRTYIMPAHLQTGVDDVKGVFFAWAQKVGL :..:.. .:. ...: . . ..... :: : :.: CCDS54 VEQAVLDAGFDIEQLLHSPQSYSVTNAANN--GVCFIVARKKPGP 230 240 250 260 >>CCDS56479.1 INMT gene_id:11185|Hs108|chr7 (262 aa) initn: 525 init1: 388 opt: 593 Z-score: 687.8 bits: 135.0 E(32554): 5.5e-32 Smith-Waterman score: 593; 39.2% identity (70.6% similar) in 255 aa overlap (27-279:11-258) 10 20 30 40 50 pF1KE1 MSGADRSPNAGAAPDSAPGQAAVASAYQR-FEPRAYLRNNYAPPRGDLCNPNGVGPWKLR ::. : :: :: . :. :. . ..:. CCDS56 MKGGFTGGDEYQKHFLPRDYLATYYSFD-GSPSPEAEMLKFNLE 10 20 30 40 60 70 80 90 100 110 pF1KE1 CLAQTFATGEVSGRTLIDIGSGPTVYQLLSACSHFEDITMTDFLEVNRQELGRWLQEEPG :: .::. : ..: ::::::::::.::.:.::. :.:::..:: . ::.:: .::..::: CCDS56 CLHKTFGPG-LQGDTLIDIGSGPTIYQVLAACDSFQDITLSDFTDRNREELEKWLKKEPG 50 60 70 80 90 100 120 130 140 150 160 170 pF1KE1 AFNWSMYSQHACLIEGKGECWQDKERQLRARVKRVLPIDVHQPQPLGAGSPAPLP-ADAL :..:. . :: .::.. :..::..::: ::::: ::: .:: .:: :: :: . CCDS56 AYDWTPAVKFACELEGNSGRWEEKEEKLRAAVKRVLKCDVHLGNPL---APAVLPLADCV 110 120 130 140 150 180 190 200 210 220 230 pF1KE1 VSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLIGALEESWYLAGEARLTVVPVSEEE .. . .: . .: ... :: ....::.:::::. .:. :..:. ... : . .:: CCDS56 LTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTTVTLRLPSYMVGKREFSCVALEKEE 160 170 180 190 200 210 240 250 260 270 280 pF1KE1 VREALVRSGYKVRDLRTYIMPAHLQTGVDDVKGVFFAWAQKVGL :..:.. .:. ...: . . ..... :: : :.: CCDS56 VEQAVLDAGFDIEQLLHSPQSYSVTNAANN--GVCFIVARKKPGP 220 230 240 250 260 >>CCDS8368.1 NNMT gene_id:4837|Hs108|chr11 (264 aa) initn: 583 init1: 345 opt: 592 Z-score: 686.6 bits: 134.8 E(32554): 6.4e-32 Smith-Waterman score: 592; 39.7% identity (68.7% similar) in 252 aa overlap (30-280:15-260) 10 20 30 40 50 pF1KE1 MSGADRSPNAGAAPDSAPGQAAVASAYQRFEPRAYLRNNYAPPRGDLCNPNG-VGPWKLR :.:: ::.. : :. . .. . :. CCDS83 MESGFTSKDTYLSHFNPRDYLEKYY--KFGSRHSAESQILKHLLK 10 20 30 40 60 70 80 90 100 110 pF1KE1 CLAQTFATGEVSGRTLIDIGSGPTVYQLLSACSHFEDITMTDFLEVNRQELGRWLQEEPG : . : :.: :::::::::.::::::: :..:..::. . : ::: .::..:: CCDS83 NLFKIFCLDGVKGDLLIDIGSGPTIYQLLSACESFKEIVVTDYSDQNLQELEKWLKKEPE 50 60 70 80 90 100 120 130 140 150 160 170 pF1KE1 AFNWSMYSQHACLIEGKGECWQDKERQLRARVKRVLPIDVHQPQPLGAGSPAPLPADALV ::.:: ..: .::. .::..:: ::.:: :: : ::::: : : ::: .. CCDS83 AFDWSPVVTYVCDLEGNRVKGPEKEEKLRQAVKQVLKCDVTQSQPLGA-VPLP-PADCVL 110 120 130 140 150 160 180 190 200 210 220 230 pF1KE1 SAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLIGALEESWYLAGEARLTVVPVSEEEV :..::.:. ::: .. ::: .. .::.::: :... ::. :.:. :: ... .:...: : CCDS83 STLCLDAACPDLPTYCRALRNLGSLLKPGGFLVIMDALKSSYYMIGEQKFSSLPLGREAV 170 180 190 200 210 220 240 250 260 270 280 pF1KE1 REALVRSGYKVRDLRTYIMPAHLQTGVDDVKGVFFAWAQKVGL . :. ..:: .. .. .. .. . . .:.: :.:. CCDS83 EAAVKEAGYTIEWFE--VISQSYSSTMANNEGLFSLVARKLSRPL 230 240 250 260 282 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 13:51:02 2016 done: Sun Nov 6 13:51:02 2016 Total Scan time: 2.670 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]