FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE3989, 380 aa 1>>>pF1KE3989 380 - 380 aa - 380 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.3409+/-0.000397; mu= 16.5522+/- 0.024 mean_var=89.0958+/-18.134, 0's: 0 Z-trim(113.7): 194 B-trim: 366 in 1/52 Lambda= 0.135877 statistics sampled from 22846 (23095) to 22846 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.643), E-opt: 0.2 (0.271), width: 16 Scan time: 6.290 The best scores are: opt bits E(85289) NP_060874 (OMIM: 608635) arf-GAP with dual PH doma ( 381) 2603 520.7 2.3e-147 NP_006860 (OMIM: 608114) arf-GAP with dual PH doma ( 374) 1554 315.0 1.8e-85 NP_001271237 (OMIM: 608114) arf-GAP with dual PH d ( 385) 1468 298.2 2.2e-80 NP_001271238 (OMIM: 608114) arf-GAP with dual PH d ( 302) 1207 246.9 4.6e-65 NP_001271239 (OMIM: 608114) arf-GAP with dual PH d ( 302) 1207 246.9 4.6e-65 NP_001271240 (OMIM: 608114) arf-GAP with dual PH d ( 279) 1099 225.7 1e-58 NP_073570 (OMIM: 616916) stromal membrane-associat ( 429) 333 75.7 2.2e-13 XP_011534349 (OMIM: 611372) PREDICTED: stromal mem ( 429) 325 74.2 6.6e-13 NP_001268368 (OMIM: 611372) stromal membrane-assoc ( 436) 325 74.2 6.7e-13 NP_068759 (OMIM: 611372) stromal membrane-associat ( 440) 325 74.2 6.8e-13 XP_005248817 (OMIM: 611372) PREDICTED: stromal mem ( 250) 314 71.8 2e-12 XP_011534347 (OMIM: 611372) PREDICTED: stromal mem ( 456) 314 72.0 3.1e-12 NP_001037770 (OMIM: 611372) stromal membrane-assoc ( 467) 314 72.0 3.1e-12 XP_016867224 (OMIM: 616813) PREDICTED: arf-GAP wit ( 462) 303 69.9 1.4e-11 XP_016867222 (OMIM: 616813) PREDICTED: arf-GAP wit ( 527) 303 69.9 1.5e-11 XP_005250000 (OMIM: 616813) PREDICTED: arf-GAP wit ( 565) 303 69.9 1.6e-11 XP_016867223 (OMIM: 616813) PREDICTED: arf-GAP wit ( 580) 303 70.0 1.6e-11 NP_001268229 (OMIM: 616813) arf-GAP with GTPase, A ( 580) 303 70.0 1.6e-11 XP_016867221 (OMIM: 616813) PREDICTED: arf-GAP wit ( 630) 303 70.0 1.7e-11 XP_011514082 (OMIM: 616813) PREDICTED: arf-GAP wit ( 683) 303 70.0 1.8e-11 NP_114152 (OMIM: 616813) arf-GAP with GTPase, ANK ( 911) 303 70.1 2.3e-11 NP_055531 (OMIM: 607763) arf-GAP with coiled-coil, ( 740) 298 69.1 3.9e-11 NP_055729 (OMIM: 608651) arf-GAP with GTPase, ANK ( 804) 298 69.1 4.1e-11 XP_005246116 (OMIM: 608651) PREDICTED: arf-GAP wit ( 808) 298 69.1 4.1e-11 NP_001032208 (OMIM: 608651) arf-GAP with GTPase, A ( 857) 298 69.1 4.3e-11 XP_006712298 (OMIM: 608651) PREDICTED: arf-GAP wit ( 882) 298 69.1 4.4e-11 XP_006712297 (OMIM: 608651) PREDICTED: arf-GAP wit ( 886) 298 69.1 4.4e-11 XP_011508851 (OMIM: 608651) PREDICTED: arf-GAP wit (1073) 298 69.2 5.1e-11 XP_011508850 (OMIM: 608651) PREDICTED: arf-GAP wit (1098) 298 69.2 5.1e-11 XP_016858771 (OMIM: 608651) PREDICTED: arf-GAP wit (1106) 298 69.2 5.2e-11 XP_011508849 (OMIM: 608651) PREDICTED: arf-GAP wit (1126) 298 69.2 5.2e-11 XP_006712300 (OMIM: 608651) PREDICTED: arf-GAP wit (1147) 298 69.2 5.3e-11 XP_006712302 (OMIM: 608651) PREDICTED: arf-GAP wit (1151) 298 69.2 5.3e-11 XP_011510908 (OMIM: 607766) PREDICTED: arf-GAP wit ( 776) 290 67.5 1.2e-10 XP_011510907 (OMIM: 607766) PREDICTED: arf-GAP wit ( 776) 290 67.5 1.2e-10 XP_011510906 (OMIM: 607766) PREDICTED: arf-GAP wit ( 776) 290 67.5 1.2e-10 NP_036419 (OMIM: 607766) arf-GAP with coiled-coil, ( 778) 290 67.5 1.2e-10 XP_006713620 (OMIM: 607766) PREDICTED: arf-GAP wit ( 785) 290 67.5 1.2e-10 XP_016861538 (OMIM: 607766) PREDICTED: arf-GAP wit ( 806) 290 67.5 1.2e-10 XP_011510905 (OMIM: 607766) PREDICTED: arf-GAP wit ( 813) 290 67.5 1.2e-10 XP_016861537 (OMIM: 607766) PREDICTED: arf-GAP wit ( 813) 290 67.5 1.2e-10 XP_011510904 (OMIM: 607766) PREDICTED: arf-GAP wit ( 820) 290 67.5 1.2e-10 XP_016861536 (OMIM: 607766) PREDICTED: arf-GAP wit ( 841) 290 67.6 1.3e-10 XP_016861535 (OMIM: 607766) PREDICTED: arf-GAP wit ( 848) 290 67.6 1.3e-10 NP_001185907 (OMIM: 616916) stromal membrane-assoc ( 399) 280 65.3 2.8e-10 XP_011540262 (OMIM: 616916) PREDICTED: stromal mem ( 403) 280 65.3 2.9e-10 NP_001185908 (OMIM: 616916) stromal membrane-assoc ( 424) 280 65.3 3e-10 NP_055585 (OMIM: 605476) arf-GAP with GTPase, ANK ( 836) 280 65.6 4.9e-10 XP_005268683 (OMIM: 605476) PREDICTED: arf-GAP wit ( 856) 280 65.6 5e-10 XP_005268682 (OMIM: 605476) PREDICTED: arf-GAP wit (1172) 280 65.7 6.2e-10 >>NP_060874 (OMIM: 608635) arf-GAP with dual PH domain-c (381 aa) initn: 1852 init1: 1852 opt: 2603 Z-score: 2766.7 bits: 520.7 E(85289): 2.3e-147 Smith-Waterman score: 2603; 99.7% identity (99.7% similar) in 381 aa overlap (1-380:1-381) 10 20 30 40 50 60 pF1KE3 MGDRERNKKRLLELLRAPDTGNAHCADCGAADPDWASYKLGIFICLNCCGVHRNFPDISR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_060 MGDRERNKKRLLELLRAPDTGNAHCADCGAADPDWASYKLGIFICLNCCGVHRNFPDISR 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 VKSVRLDFWDDSIVEFMIHNGNLRVKAKFEARVPAFYYIPQANDCLVLKEQWIRAKYERR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_060 VKSVRLDFWDDSIVEFMIHNGNLRVKAKFEARVPAFYYIPQANDCLVLKEQWIRAKYERR 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 EFMADGETISLPGNREGFLWKRGRDNSQFLRRKFVLLAREGLLKYFTKEQGKSPKAVISI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_060 EFMADGETISLPGNREGFLWKRGRDNSQFLRRKFVLLAREGLLKYFTKEQGKSPKAVISI 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 KDLNATFQTEKIGHPHGLQITYRRDGHTRNLFVYHESGKEIVDWFNALRAARLQYLKMAF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_060 KDLNATFQTEKIGHPHGLQITYRRDGHTRNLFVYHESGKEIVDWFNALRAARLQYLKMAF 190 200 210 220 230 240 250 260 270 280 290 pF1KE3 PELPESELVPFLTRNYLKQGFMEKTGPK-KEPFKKRWFALDCHERRLLYYKNPLDAFEQG :::::::::::::::::::::::::::: ::::::::::::::::::::::::::::::: NP_060 PELPESELVPFLTRNYLKQGFMEKTGPKQKEPFKKRWFALDCHERRLLYYKNPLDAFEQG 250 260 270 280 290 300 300 310 320 330 340 350 pF1KE3 QVFLGNKEQGYEAYEDLPKGIRGNRWKAGLTIVTPERRFVLTCPSEKEQQEWLESLRGVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_060 QVFLGNKEQGYEAYEDLPKGIRGNRWKAGLTIVTPERRFVLTCPSEKEQQEWLESLRGVL 310 320 330 340 350 360 360 370 380 pF1KE3 SSPLTPLNRLTASTESGRSSR ::::::::::::::::::::: NP_060 SSPLTPLNRLTASTESGRSSR 370 380 >>NP_006860 (OMIM: 608114) arf-GAP with dual PH domain-c (374 aa) initn: 1339 init1: 674 opt: 1554 Z-score: 1655.5 bits: 315.0 E(85289): 1.8e-85 Smith-Waterman score: 1554; 58.5% identity (84.1% similar) in 364 aa overlap (4-365:3-361) 10 20 30 40 50 60 pF1KE3 MGDRERNKKRLLELLRAPDTGNAHCADCGAADPDWASYKLGIFICLNCCGVHRNFPDISR .:: .. .::::. : :::.:::::: ::::::: ::.::::.: :.:::.:..:. NP_006 MAKER-RRAVLELLQRP--GNARCADCGAPDPDWASYTLGVFICLSCSGIHRNIPQVSK 10 20 30 40 50 70 80 90 100 110 120 pF1KE3 VKSVRLDFWDDSIVEFMIHNGNLRVKAKFEARVPAFYYIPQANDCLVLKEQWIRAKYERR ::::::: :... :::: .:: ..:.::..::.::: : .:: .:.::::::::::. NP_006 VKSVRLDAWEEAQVEFMASHGNDAARARFESKVPSFYYRPTPSDCQLLREQWIRAKYERQ 60 70 80 90 100 110 130 140 150 160 170 pF1KE3 EFM-ADGETISLPGNREGFLWKRGRDNSQFLRRKFVLLAREGLLKYFTKEQGKSPKAVIS ::. . . : ::::::::::::.::: ::::: ::: ::::.....: ::::.. NP_006 EFIYPEKQEPYSAGYREGFLWKRGRDNGQFLSRKFVLTEREGALKYFNRNDAKEPKAVMK 120 130 140 150 160 170 180 190 200 210 220 230 pF1KE3 IKDLNATFQTEKIGHPHGLQITYRRDGHTRNLFVYHESGKEIVDWFNALRAARLQYLKMA :. :::::: :::::::::.:: .:. :::.:.:::.:::::::::::::::..::..: NP_006 IEHLNATFQPAKIGHPHGLQVTYLKDNSTRNIFIYHEDGKEIVDWFNALRAARFHYLQVA 180 190 200 210 220 230 240 250 260 270 280 290 pF1KE3 FPELPESELVPFLTRNYLKQGFMEKTGPKK-EPFKKRWFALDCHERRLLYYKNPLDAFEQ :: ...::: :.:::::.:.:::::::. : :.::::..: .:::.:.:.::::: . NP_006 FPGASDADLVPKLSRNYLKEGYMEKTGPKQTEGFRKRWFTMD--DRRLMYFKDPLDAFAR 240 250 260 270 280 290 300 310 320 330 340 350 pF1KE3 GQVFLGNKEQGYEAYEDLPKGIRGNRWKAGLTIVTPERRFVLTCPSEKEQQEWLESLRGV :.::.:.::.:: . . .: . .:..: :.:::::.:.:...: .:..:.::. ... . NP_006 GEVFIGSKESGYTVLHGFPPSTQGHHWPHGITIVTPDRKFLFACETESDQREWVAAFQKA 300 310 320 330 340 350 360 370 380 pF1KE3 LSSPLTPLNRLTASTESGRSSR .. :. : NP_006 VDRPMLPQEYAVEAHFKHKP 360 370 >>NP_001271237 (OMIM: 608114) arf-GAP with dual PH domai (385 aa) initn: 1268 init1: 674 opt: 1468 Z-score: 1564.2 bits: 298.2 E(85289): 2.2e-80 Smith-Waterman score: 1468; 57.9% identity (83.3% similar) in 347 aa overlap (25-365:28-372) 10 20 30 40 50 pF1KE3 MGDRERNKKRLLELLRAPDTGNAHCADCGAA----DPDWASYKLGIFICLNCCGVHR ::. : : ::::::: ::.::::.: :.:: NP_001 MFQFVFSRVYCINPARRKWKEFEKMLGCAEEGHASLGRDPDWASYTLGVFICLSCSGIHR 10 20 30 40 50 60 60 70 80 90 100 110 pF1KE3 NFPDISRVKSVRLDFWDDSIVEFMIHNGNLRVKAKFEARVPAFYYIPQANDCLVLKEQWI :.:..:.::::::: :... :::: .:: ..:.::..::.::: : .:: .:.:::: NP_001 NIPQVSKVKSVRLDAWEEAQVEFMASHGNDAARARFESKVPSFYYRPTPSDCQLLREQWI 70 80 90 100 110 120 120 130 140 150 160 170 pF1KE3 RAKYERREFM-ADGETISLPGNREGFLWKRGRDNSQFLRRKFVLLAREGLLKYFTKEQGK ::::::.::. . . : ::::::::::::.::: ::::: ::: ::::.....: NP_001 RAKYERQEFIYPEKQEPYSAGYREGFLWKRGRDNGQFLSRKFVLTEREGALKYFNRNDAK 130 140 150 160 170 180 180 190 200 210 220 230 pF1KE3 SPKAVISIKDLNATFQTEKIGHPHGLQITYRRDGHTRNLFVYHESGKEIVDWFNALRAAR ::::..:. :::::: :::::::::.:: .:. :::.:.:::.::::::::::::::: NP_001 EPKAVMKIEHLNATFQPAKIGHPHGLQVTYLKDNSTRNIFIYHEDGKEIVDWFNALRAAR 190 200 210 220 230 240 240 250 260 270 280 290 pF1KE3 LQYLKMAFPELPESELVPFLTRNYLKQGFMEKTGPKK-EPFKKRWFALDCHERRLLYYKN ..::..::: ...::: :.:::::.:.:::::::. : :.::::..: .:::.:.:. NP_001 FHYLQVAFPGASDADLVPKLSRNYLKEGYMEKTGPKQTEGFRKRWFTMD--DRRLMYFKD 250 260 270 280 290 300 310 320 330 340 350 pF1KE3 PLDAFEQGQVFLGNKEQGYEAYEDLPKGIRGNRWKAGLTIVTPERRFVLTCPSEKEQQEW ::::: .:.::.:.::.:: . . .: . .:..: :.:::::.:.:...: .:..:.:: NP_001 PLDAFARGEVFIGSKESGYTVLHGFPPSTQGHHWPHGITIVTPDRKFLFACETESDQREW 300 310 320 330 340 350 360 370 380 pF1KE3 LESLRGVLSSPLTPLNRLTASTESGRSSR . ... ... :. : NP_001 VAAFQKAVDRPMLPQEYAVEAHFKHKP 360 370 380 >>NP_001271238 (OMIM: 608114) arf-GAP with dual PH domai (302 aa) initn: 1011 init1: 674 opt: 1207 Z-score: 1289.1 bits: 246.9 E(85289): 4.6e-65 Smith-Waterman score: 1207; 57.0% identity (83.5% similar) in 291 aa overlap (77-365:1-289) 50 60 70 80 90 100 pF1KE3 NCCGVHRNFPDISRVKSVRLDFWDDSIVEFMIHNGNLRVKAKFEARVPAFYYIPQANDCL : .:: ..:.::..::.::: : .:: NP_001 MASHGNDAARARFESKVPSFYYRPTPSDCQ 10 20 30 110 120 130 140 150 160 pF1KE3 VLKEQWIRAKYERREFM-ADGETISLPGNREGFLWKRGRDNSQFLRRKFVLLAREGLLKY .:.::::::::::.::. . . : ::::::::::::.::: ::::: ::: ::: NP_001 LLREQWIRAKYERQEFIYPEKQEPYSAGYREGFLWKRGRDNGQFLSRKFVLTEREGALKY 40 50 60 70 80 90 170 180 190 200 210 220 pF1KE3 FTKEQGKSPKAVISIKDLNATFQTEKIGHPHGLQITYRRDGHTRNLFVYHESGKEIVDWF :.....: ::::..:. :::::: :::::::::.:: .:. :::.:.:::.:::::::: NP_001 FNRNDAKEPKAVMKIEHLNATFQPAKIGHPHGLQVTYLKDNSTRNIFIYHEDGKEIVDWF 100 110 120 130 140 150 230 240 250 260 270 280 pF1KE3 NALRAARLQYLKMAFPELPESELVPFLTRNYLKQGFMEKTGPKK-EPFKKRWFALDCHER :::::::..::..::: ...::: :.:::::.:.:::::::. : :.::::..: .: NP_001 NALRAARFHYLQVAFPGASDADLVPKLSRNYLKEGYMEKTGPKQTEGFRKRWFTMD--DR 160 170 180 190 200 290 300 310 320 330 340 pF1KE3 RLLYYKNPLDAFEQGQVFLGNKEQGYEAYEDLPKGIRGNRWKAGLTIVTPERRFVLTCPS ::.:.:.::::: .:.::.:.::.:: . . .: . .:..: :.:::::.:.:...: . NP_001 RLMYFKDPLDAFARGEVFIGSKESGYTVLHGFPPSTQGHHWPHGITIVTPDRKFLFACET 210 220 230 240 250 260 350 360 370 380 pF1KE3 EKEQQEWLESLRGVLSSPLTPLNRLTASTESGRSSR :..:.::. ... ... :. : NP_001 ESDQREWVAAFQKAVDRPMLPQEYAVEAHFKHKP 270 280 290 300 >>NP_001271239 (OMIM: 608114) arf-GAP with dual PH domai (302 aa) initn: 1011 init1: 674 opt: 1207 Z-score: 1289.1 bits: 246.9 E(85289): 4.6e-65 Smith-Waterman score: 1207; 57.0% identity (83.5% similar) in 291 aa overlap (77-365:1-289) 50 60 70 80 90 100 pF1KE3 NCCGVHRNFPDISRVKSVRLDFWDDSIVEFMIHNGNLRVKAKFEARVPAFYYIPQANDCL : .:: ..:.::..::.::: : .:: NP_001 MASHGNDAARARFESKVPSFYYRPTPSDCQ 10 20 30 110 120 130 140 150 160 pF1KE3 VLKEQWIRAKYERREFM-ADGETISLPGNREGFLWKRGRDNSQFLRRKFVLLAREGLLKY .:.::::::::::.::. . . : ::::::::::::.::: ::::: ::: ::: NP_001 LLREQWIRAKYERQEFIYPEKQEPYSAGYREGFLWKRGRDNGQFLSRKFVLTEREGALKY 40 50 60 70 80 90 170 180 190 200 210 220 pF1KE3 FTKEQGKSPKAVISIKDLNATFQTEKIGHPHGLQITYRRDGHTRNLFVYHESGKEIVDWF :.....: ::::..:. :::::: :::::::::.:: .:. :::.:.:::.:::::::: NP_001 FNRNDAKEPKAVMKIEHLNATFQPAKIGHPHGLQVTYLKDNSTRNIFIYHEDGKEIVDWF 100 110 120 130 140 150 230 240 250 260 270 280 pF1KE3 NALRAARLQYLKMAFPELPESELVPFLTRNYLKQGFMEKTGPKK-EPFKKRWFALDCHER :::::::..::..::: ...::: :.:::::.:.:::::::. : :.::::..: .: NP_001 NALRAARFHYLQVAFPGASDADLVPKLSRNYLKEGYMEKTGPKQTEGFRKRWFTMD--DR 160 170 180 190 200 290 300 310 320 330 340 pF1KE3 RLLYYKNPLDAFEQGQVFLGNKEQGYEAYEDLPKGIRGNRWKAGLTIVTPERRFVLTCPS ::.:.:.::::: .:.::.:.::.:: . . .: . .:..: :.:::::.:.:...: . NP_001 RLMYFKDPLDAFARGEVFIGSKESGYTVLHGFPPSTQGHHWPHGITIVTPDRKFLFACET 210 220 230 240 250 260 350 360 370 380 pF1KE3 EKEQQEWLESLRGVLSSPLTPLNRLTASTESGRSSR :..:.::. ... ... :. : NP_001 ESDQREWVAAFQKAVDRPMLPQEYAVEAHFKHKP 270 280 290 300 >>NP_001271240 (OMIM: 608114) arf-GAP with dual PH domai (279 aa) initn: 999 init1: 674 opt: 1099 Z-score: 1175.1 bits: 225.7 E(85289): 1e-58 Smith-Waterman score: 1099; 58.2% identity (84.7% similar) in 261 aa overlap (107-365:8-266) 80 90 100 110 120 130 pF1KE3 MIHNGNLRVKAKFEARVPAFYYIPQANDCLVLKEQWIRAKYERREFM-ADGETISLPGNR .:.::::::::::.::. . . : : NP_001 MVLASLELLREQWIRAKYERQEFIYPEKQEPYSAGYR 10 20 30 140 150 160 170 180 190 pF1KE3 EGFLWKRGRDNSQFLRRKFVLLAREGLLKYFTKEQGKSPKAVISIKDLNATFQTEKIGHP :::::::::::.::: ::::: ::: ::::.....: ::::..:. :::::: ::::: NP_001 EGFLWKRGRDNGQFLSRKFVLTEREGALKYFNRNDAKEPKAVMKIEHLNATFQPAKIGHP 40 50 60 70 80 90 200 210 220 230 240 250 pF1KE3 HGLQITYRRDGHTRNLFVYHESGKEIVDWFNALRAARLQYLKMAFPELPESELVPFLTRN ::::.:: .:. :::.:.:::.:::::::::::::::..::..::: ...::: :.:: NP_001 HGLQVTYLKDNSTRNIFIYHEDGKEIVDWFNALRAARFHYLQVAFPGASDADLVPKLSRN 100 110 120 130 140 150 260 270 280 290 300 310 pF1KE3 YLKQGFMEKTGPKK-EPFKKRWFALDCHERRLLYYKNPLDAFEQGQVFLGNKEQGYEAYE :::.:.:::::::. : :.::::..: .:::.:.:.::::: .:.::.:.::.:: . . NP_001 YLKEGYMEKTGPKQTEGFRKRWFTMD--DRRLMYFKDPLDAFARGEVFIGSKESGYTVLH 160 170 180 190 200 210 320 330 340 350 360 370 pF1KE3 DLPKGIRGNRWKAGLTIVTPERRFVLTCPSEKEQQEWLESLRGVLSSPLTPLNRLTASTE .: . .:..: :.:::::.:.:...: .:..:.::. ... ... :. : NP_001 GFPPSTQGHHWPHGITIVTPDRKFLFACETESDQREWVAAFQKAVDRPMLPQEYAVEAHF 220 230 240 250 260 270 380 pF1KE3 SGRSSR NP_001 KHKP >>NP_073570 (OMIM: 616916) stromal membrane-associated p (429 aa) initn: 314 init1: 166 opt: 333 Z-score: 361.1 bits: 75.7 E(85289): 2.2e-13 Smith-Waterman score: 333; 33.0% identity (57.3% similar) in 185 aa overlap (3-183:8-187) 10 20 30 40 50 pF1KE3 MGDRERNKKRLLELLRAPDTGNAHCADCGAADPDWASYKLGIFICLNCCGVHRNF : .: . : .:: : : :::: . : :::...:.:::. : :.:::. NP_073 MTGKSVKDVDRYQAVLANLLLEED--NKFCADCQSKGPRWASWNIGVFICIRCAGIHRNL 10 20 30 40 50 60 70 80 90 100 110 pF1KE3 P-DISRVKSVRLDFWDDSIVEFMIHNGNLRVKAKFEARVPAFYYIPQANDCLVLKEQWIR ::::::: :: : . .. : . :: ... .:: .: . :: . . : .:: NP_073 GVHISRVKSVNLDQWTQEQIQCMQEMGNGKANRLYEAYLPETFRRPQIDPAV---EGFIR 60 70 80 90 100 110 120 130 140 150 160 170 pF1KE3 AKYERREFMADGETISLPGNREGFLWKRGRDNSQFLRRKFVLLAREGLLKYFTKEQ---G :::....: . :. ... :::: . . . :.. . . . : NP_073 DKYEKKKYMDRSLDINAFRKEKDDKWKRGSEPVPEKKLEPVVFEKVKMPQKKEDPQLPRK 120 130 140 150 160 170 180 190 200 210 220 230 pF1KE3 KSPKAVISIKDLNATFQTEKIGHPHGLQITYRRDGHTRNLFVYHESGKEIVDWFNALRAA .:::.. . :: NP_073 SSPKSTAPVMDLLGLDAPVACSIANSKTSNTLEKDLDLLASVPSPSSSGSRKVVGSMPTA 180 190 200 210 220 230 >>XP_011534349 (OMIM: 611372) PREDICTED: stromal membran (429 aa) initn: 297 init1: 172 opt: 325 Z-score: 352.7 bits: 74.2 E(85289): 6.6e-13 Smith-Waterman score: 325; 36.0% identity (59.6% similar) in 178 aa overlap (5-181:15-182) 10 20 30 40 50 pF1KE3 MGDRERNKKRLLELLRAPDTGNAHCADCGAADPDWASYKLGIFICLNCCG :... : .::: : : .:::: : : :::...:.:::. : : XP_011 MATRSCREKAQKLNEQHQLILSKLLREED--NKYCADCEAKGPRWASWNIGVFICIRCAG 10 20 30 40 50 60 70 80 90 100 pF1KE3 VHRNFP-DISRVKSVRLDFWDDSIVEFMIHNGNLRVKAKFEARVPAFYYIPQANDCLVLK .:::. ::::::: :: : .. : :: ... .:: .: . ::... . XP_011 IHRNLGVHISRVKSVNLDQWTAEQIQCMQDMGNTKARLLYEANLPENFRRPQTDQAV--- 60 70 80 90 100 110 110 120 130 140 150 160 pF1KE3 EQWIRAKYERREFMADGETISLPGNREGFLWKRGRDNSQFLRRKFVLLAREGLLKYFTKE : .:: :::..... : ..:.. :.: :. . . .. :. : : : :. XP_011 EFFIRDKYEKKKYY-DKNAIAIT-NKEKEKKKEEKKREKEPEKPAKPLTAEKLQK---KD 120 130 140 150 160 170 170 180 190 200 210 220 pF1KE3 QGKSPKAVISIKDLNATFQTEKIGHPHGLQITYRRDGHTRNLFVYHESGKEIVDWFNALR : :: : : XP_011 QQLEPKKSTSPKKAAEPTVDLLGLDGPAVAPVTNGNTTVPPLNDDLDIFGPMISNPLPAT 180 190 200 210 220 230 >>NP_001268368 (OMIM: 611372) stromal membrane-associate (436 aa) initn: 297 init1: 172 opt: 325 Z-score: 352.6 bits: 74.2 E(85289): 6.7e-13 Smith-Waterman score: 325; 36.0% identity (59.6% similar) in 178 aa overlap (5-181:15-182) 10 20 30 40 50 pF1KE3 MGDRERNKKRLLELLRAPDTGNAHCADCGAADPDWASYKLGIFICLNCCG :... : .::: : : .:::: : : :::...:.:::. : : NP_001 MATRSCREKAQKLNEQHQLILSKLLREED--NKYCADCEAKGPRWASWNIGVFICIRCAG 10 20 30 40 50 60 70 80 90 100 pF1KE3 VHRNFP-DISRVKSVRLDFWDDSIVEFMIHNGNLRVKAKFEARVPAFYYIPQANDCLVLK .:::. ::::::: :: : .. : :: ... .:: .: . ::... . NP_001 IHRNLGVHISRVKSVNLDQWTAEQIQCMQDMGNTKARLLYEANLPENFRRPQTDQAV--- 60 70 80 90 100 110 110 120 130 140 150 160 pF1KE3 EQWIRAKYERREFMADGETISLPGNREGFLWKRGRDNSQFLRRKFVLLAREGLLKYFTKE : .:: :::..... : ..:.. :.: :. . . .. :. : : : :. NP_001 EFFIRDKYEKKKYY-DKNAIAIT-NKEKEKKKEEKKREKEPEKPAKPLTAEKLQK---KD 120 130 140 150 160 170 170 180 190 200 210 220 pF1KE3 QGKSPKAVISIKDLNATFQTEKIGHPHGLQITYRRDGHTRNLFVYHESGKEIVDWFNALR : :: : : NP_001 QQLEPKKSTSPKKAAEPTVDLLGLDGPAVAPVTNGNTTVPPLNDDLDIFGPMISNPLPAT 180 190 200 210 220 230 >>NP_068759 (OMIM: 611372) stromal membrane-associated p (440 aa) initn: 297 init1: 172 opt: 325 Z-score: 352.5 bits: 74.2 E(85289): 6.8e-13 Smith-Waterman score: 325; 36.0% identity (59.6% similar) in 178 aa overlap (5-181:15-182) 10 20 30 40 50 pF1KE3 MGDRERNKKRLLELLRAPDTGNAHCADCGAADPDWASYKLGIFICLNCCG :... : .::: : : .:::: : : :::...:.:::. : : NP_068 MATRSCREKAQKLNEQHQLILSKLLREED--NKYCADCEAKGPRWASWNIGVFICIRCAG 10 20 30 40 50 60 70 80 90 100 pF1KE3 VHRNFP-DISRVKSVRLDFWDDSIVEFMIHNGNLRVKAKFEARVPAFYYIPQANDCLVLK .:::. ::::::: :: : .. : :: ... .:: .: . ::... . NP_068 IHRNLGVHISRVKSVNLDQWTAEQIQCMQDMGNTKARLLYEANLPENFRRPQTDQAV--- 60 70 80 90 100 110 110 120 130 140 150 160 pF1KE3 EQWIRAKYERREFMADGETISLPGNREGFLWKRGRDNSQFLRRKFVLLAREGLLKYFTKE : .:: :::..... : ..:.. :.: :. . . .. :. : : : :. NP_068 EFFIRDKYEKKKYY-DKNAIAIT-NKEKEKKKEEKKREKEPEKPAKPLTAEKLQK---KD 120 130 140 150 160 170 170 180 190 200 210 220 pF1KE3 QGKSPKAVISIKDLNATFQTEKIGHPHGLQITYRRDGHTRNLFVYHESGKEIVDWFNALR : :: : : NP_068 QQLEPKKSTSPKKAAEPTVDLLGLDGPAVAPVTNGNTTVPPLNDDLDIFGPMISNPLPAT 180 190 200 210 220 230 380 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 19:08:53 2016 done: Mon Nov 7 19:08:55 2016 Total Scan time: 6.290 Total Display time: 0.070 Function used was FASTA [36.3.4 Apr, 2011]