Result of FASTA (omim) for
pFN21AB9096
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB9096, 602 aa
1>>>pF1KB9096 602 - 602 aa - 602 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.7041+/-0.000402; mu= 16.6184+/- 0.025
mean_var=65.5760+/-13.564, 0's: 0 Z-trim(111.8): 35 B-trim: 141 in 1/49
Lambda= 0.158381
statistics sampled from 20427 (20462) to 20427 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.591), E-opt: 0.2 (0.24), width: 16
Scan time: 10.390
The best scores are: opt bits E(85289)
NP_690872 (OMIM: 609833) multidrug and toxin extru ( 602) 3948 911.3 0
NP_001093116 (OMIM: 609833) multidrug and toxin ex ( 566) 2509 582.5 1.3e-165
XP_016879714 (OMIM: 609833) PREDICTED: multidrug a ( 384) 2300 534.7 2.2e-151
XP_016879713 (OMIM: 609833) PREDICTED: multidrug a ( 415) 2293 533.1 7e-151
XP_016879712 (OMIM: 609833) PREDICTED: multidrug a ( 438) 2293 533.1 7.4e-151
XP_016879710 (OMIM: 609833) PREDICTED: multidrug a ( 616) 2293 533.2 1e-150
XP_016879715 (OMIM: 609833) PREDICTED: multidrug a ( 351) 2289 532.2 1.1e-150
XP_016879711 (OMIM: 609833) PREDICTED: multidrug a ( 567) 1950 454.8 3.7e-127
NP_001243592 (OMIM: 609833) multidrug and toxin ex ( 580) 1662 389.0 2.4e-107
NP_060712 (OMIM: 609832) multidrug and toxin extru ( 570) 1116 264.2 8.5e-70
>>NP_690872 (OMIM: 609833) multidrug and toxin extrusion (602 aa)
initn: 3948 init1: 3948 opt: 3948 Z-score: 4870.9 bits: 911.3 E(85289): 0
Smith-Waterman score: 3948; 100.0% identity (100.0% similar) in 602 aa overlap (1-602:1-602)
10 20 30 40 50 60
pF1KB9 MDSLQDTVALDHGGCCPALSRLVPRGFGTEMWTLFALSGPLFLFQVLTFMIYIVSTVFCG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_690 MDSLQDTVALDHGGCCPALSRLVPRGFGTEMWTLFALSGPLFLFQVLTFMIYIVSTVFCG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 HLGKVELASVTLAVAFVNVCGVSVGVGLSSACDTLMSQSFGSPNKKHVGVILQRGALVLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_690 HLGKVELASVTLAVAFVNVCGVSVGVGLSSACDTLMSQSFGSPNKKHVGVILQRGALVLL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 LCCLPCWALFLNTQHILLLFRQDPDVSRLTQDYVMIFIPGLPVIFLYNLLAKYLQNQGWL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_690 LCCLPCWALFLNTQHILLLFRQDPDVSRLTQDYVMIFIPGLPVIFLYNLLAKYLQNQGWL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 KGQEEESPFQTPGLSILHPSHSHLSRASFHLFQKITWPQVLSGVVGNCVNGVANYALVSV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_690 KGQEEESPFQTPGLSILHPSHSHLSRASFHLFQKITWPQVLSGVVGNCVNGVANYALVSV
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 LNLGVRGSAYANIISQFAQTVFLLLYIVLKKLHLETWAGWSSQCLQDWGPFFSLAVPSML
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_690 LNLGVRGSAYANIISQFAQTVFLLLYIVLKKLHLETWAGWSSQCLQDWGPFFSLAVPSML
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 MICVEWWAYEIGSFLMGLLSVVDLSAQAVIYEVATVTYMIPLGLSIGVCVRVGMALGAAD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_690 MICVEWWAYEIGSFLMGLLSVVDLSAQAVIYEVATVTYMIPLGLSIGVCVRVGMALGAAD
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB9 TVQAKRSAVSGVLSIVGISLVLGTLISILKNQLGHIFTNDEDVIALVSQVLPVYSVFHVF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_690 TVQAKRSAVSGVLSIVGISLVLGTLISILKNQLGHIFTNDEDVIALVSQVLPVYSVFHVF
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB9 EAICCVYGGVLRGTGKQAFGAAVNAITYYIIGLPLGILLTFVVRMRIMGLWLGMLACVFL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_690 EAICCVYGGVLRGTGKQAFGAAVNAITYYIIGLPLGILLTFVVRMRIMGLWLGMLACVFL
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB9 ATAAFVAYTARLDWKLAAEEAKKHSGRQQQQRAESTATRPGPEKAVLSSVATGSSPGITL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_690 ATAAFVAYTARLDWKLAAEEAKKHSGRQQQQRAESTATRPGPEKAVLSSVATGSSPGITL
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB9 TTYSRSECHVDFFRTPEEAHALSAPTSRLSVKQLVIRRGAALGAASATLMVGLTVRILAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_690 TTYSRSECHVDFFRTPEEAHALSAPTSRLSVKQLVIRRGAALGAASATLMVGLTVRILAT
550 560 570 580 590 600
pF1KB9 RH
::
NP_690 RH
>>NP_001093116 (OMIM: 609833) multidrug and toxin extrus (566 aa)
initn: 2506 init1: 2506 opt: 2509 Z-score: 3094.3 bits: 582.5 E(85289): 1.3e-165
Smith-Waterman score: 3611; 94.0% identity (94.0% similar) in 602 aa overlap (1-602:1-566)
10 20 30 40 50 60
pF1KB9 MDSLQDTVALDHGGCCPALSRLVPRGFGTEMWTLFALSGPLFLFQVLTFMIYIVSTVFCG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MDSLQDTVALDHGGCCPALSRLVPRGFGTEMWTLFALSGPLFLFQVLTFMIYIVSTVFCG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 HLGKVELASVTLAVAFVNVCGVSVGVGLSSACDTLMSQSFGSPNKKHVGVILQRGALVLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HLGKVELASVTLAVAFVNVCGVSVGVGLSSACDTLMSQSFGSPNKKHVGVILQRGALVLL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 LCCLPCWALFLNTQHILLLFRQDPDVSRLTQDYVMIFIPGLPVIFLYNLLAKYLQNQGWL
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LCCLPCWALFLNTQHILLLFRQDPDVSRLTQDYVMIFIPGLPVIFLYNLLAKYLQNQ---
130 140 150 160 170
190 200 210 220 230 240
pF1KB9 KGQEEESPFQTPGLSILHPSHSHLSRASFHLFQKITWPQVLSGVVGNCVNGVANYALVSV
:::::::::::::::::::::::::::
NP_001 ---------------------------------KITWPQVLSGVVGNCVNGVANYALVSV
180 190 200
250 260 270 280 290 300
pF1KB9 LNLGVRGSAYANIISQFAQTVFLLLYIVLKKLHLETWAGWSSQCLQDWGPFFSLAVPSML
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LNLGVRGSAYANIISQFAQTVFLLLYIVLKKLHLETWAGWSSQCLQDWGPFFSLAVPSML
210 220 230 240 250 260
310 320 330 340 350 360
pF1KB9 MICVEWWAYEIGSFLMGLLSVVDLSAQAVIYEVATVTYMIPLGLSIGVCVRVGMALGAAD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MICVEWWAYEIGSFLMGLLSVVDLSAQAVIYEVATVTYMIPLGLSIGVCVRVGMALGAAD
270 280 290 300 310 320
370 380 390 400 410 420
pF1KB9 TVQAKRSAVSGVLSIVGISLVLGTLISILKNQLGHIFTNDEDVIALVSQVLPVYSVFHVF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TVQAKRSAVSGVLSIVGISLVLGTLISILKNQLGHIFTNDEDVIALVSQVLPVYSVFHVF
330 340 350 360 370 380
430 440 450 460 470 480
pF1KB9 EAICCVYGGVLRGTGKQAFGAAVNAITYYIIGLPLGILLTFVVRMRIMGLWLGMLACVFL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EAICCVYGGVLRGTGKQAFGAAVNAITYYIIGLPLGILLTFVVRMRIMGLWLGMLACVFL
390 400 410 420 430 440
490 500 510 520 530 540
pF1KB9 ATAAFVAYTARLDWKLAAEEAKKHSGRQQQQRAESTATRPGPEKAVLSSVATGSSPGITL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ATAAFVAYTARLDWKLAAEEAKKHSGRQQQQRAESTATRPGPEKAVLSSVATGSSPGITL
450 460 470 480 490 500
550 560 570 580 590 600
pF1KB9 TTYSRSECHVDFFRTPEEAHALSAPTSRLSVKQLVIRRGAALGAASATLMVGLTVRILAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TTYSRSECHVDFFRTPEEAHALSAPTSRLSVKQLVIRRGAALGAASATLMVGLTVRILAT
510 520 530 540 550 560
pF1KB9 RH
::
NP_001 RH
>>XP_016879714 (OMIM: 609833) PREDICTED: multidrug and t (384 aa)
initn: 2294 init1: 2294 opt: 2300 Z-score: 2838.9 bits: 534.7 E(85289): 2.2e-151
Smith-Waterman score: 2300; 90.8% identity (95.5% similar) in 381 aa overlap (1-381:1-381)
10 20 30 40 50 60
pF1KB9 MDSLQDTVALDHGGCCPALSRLVPRGFGTEMWTLFALSGPLFLFQVLTFMIYIVSTVFCG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MDSLQDTVALDHGGCCPALSRLVPRGFGTEMWTLFALSGPLFLFQVLTFMIYIVSTVFCG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 HLGKVELASVTLAVAFVNVCGVSVGVGLSSACDTLMSQSFGSPNKKHVGVILQRGALVLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HLGKVELASVTLAVAFVNVCGVSVGVGLSSACDTLMSQSFGSPNKKHVGVILQRGALVLL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 LCCLPCWALFLNTQHILLLFRQDPDVSRLTQDYVMIFIPGLPVIFLYNLLAKYLQNQGWL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LCCLPCWALFLNTQHILLLFRQDPDVSRLTQDYVMIFIPGLPVIFLYNLLAKYLQNQGWL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 KGQEEESPFQTPGLSILHPSHSHLSRASFHLFQKITWPQVLSGVVGNCVNGVANYALVSV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KGQEEESPFQTPGLSILHPSHSHLSRASFHLFQKITWPQVLSGVVGNCVNGVANYALVSV
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 LNLGVRGSAYANIISQFAQTVFLLLYIVLKKLHLETWAGWSSQCLQDWGPFFSLAVPSML
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LNLGVRGSAYANIISQFAQTVFLLLYIVLKKLHLETWAGWSSQCLQDWGPFFSLAVPSML
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 MICVEWWAYEIGSFLMGLLSVVDLSAQAVIYEVATVTYMIPLGLSIGVCVRVGMALGAAD
::::::::::::::::::::::::::::::::::::::: : : . :.. ..: .
XP_016 MICVEWWAYEIGSFLMGLLSVVDLSAQAVIYEVATVTYMDPPRASRAHQVQTLLSLRQDS
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB9 TVQAKRSAVSGVLSIVGISLVLGTLISILKNQLGHIFTNDEDVIALVSQVLPVYSVFHVF
. :. ...: .:.. ....
XP_016 HTGAHNLTTKGDISLTDVGILKIN
370 380
>>XP_016879713 (OMIM: 609833) PREDICTED: multidrug and t (415 aa)
initn: 2652 init1: 2288 opt: 2293 Z-score: 2829.7 bits: 533.1 E(85289): 7e-151
Smith-Waterman score: 2628; 96.6% identity (96.6% similar) in 415 aa overlap (1-401:1-415)
10 20 30 40 50 60
pF1KB9 MDSLQDTVALDHGGCCPALSRLVPRGFGTEMWTLFALSGPLFLFQVLTFMIYIVSTVFCG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MDSLQDTVALDHGGCCPALSRLVPRGFGTEMWTLFALSGPLFLFQVLTFMIYIVSTVFCG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 HLGKVELASVTLAVAFVNVCGVSVGVGLSSACDTLMSQSFGSPNKKHVGVILQRGALVLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HLGKVELASVTLAVAFVNVCGVSVGVGLSSACDTLMSQSFGSPNKKHVGVILQRGALVLL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 LCCLPCWALFLNTQHILLLFRQDPDVSRLTQDYVMIFIPGLPVIFLYNLLAKYLQNQGWL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LCCLPCWALFLNTQHILLLFRQDPDVSRLTQDYVMIFIPGLPVIFLYNLLAKYLQNQGWL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 KGQEEESPFQTPGLSILHPSHSHLSRASFHLFQKITWPQVLSGVVGNCVNGVANYALVSV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KGQEEESPFQTPGLSILHPSHSHLSRASFHLFQKITWPQVLSGVVGNCVNGVANYALVSV
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 LNLGVRGSAYANIISQFAQTVFLLLYIVLKKLHLETWAGWSSQCLQDWGPFFSLAVPSML
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LNLGVRGSAYANIISQFAQTVFLLLYIVLKKLHLETWAGWSSQCLQDWGPFFSLAVPSML
250 260 270 280 290 300
310 320 330 340
pF1KB9 MICVEWWAYEIGSFLMGLLSVVDLSAQAVIYEVATVTYM--------------IPLGLSI
::::::::::::::::::::::::::::::::::::::: :::::::
XP_016 MICVEWWAYEIGSFLMGLLSVVDLSAQAVIYEVATVTYMRHSHRLAYAAHVTRIPLGLSI
310 320 330 340 350 360
350 360 370 380 390 400
pF1KB9 GVCVRVGMALGAADTVQAKRSAVSGVLSIVGISLVLGTLISILKNQLGHIFTNDEDVIAL
:::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GVCVRVGMALGAADTVQAKRSAVSGVLSIVGISLVLGTLISILKNQLGHIFTNDE
370 380 390 400 410
410 420 430 440 450 460
pF1KB9 VSQVLPVYSVFHVFEAICCVYGGVLRGTGKQAFGAAVNAITYYIIGLPLGILLTFVVRMR
>>XP_016879712 (OMIM: 609833) PREDICTED: multidrug and t (438 aa)
initn: 2800 init1: 2288 opt: 2293 Z-score: 2829.4 bits: 533.1 E(85289): 7.4e-151
Smith-Waterman score: 2776; 96.8% identity (96.8% similar) in 438 aa overlap (1-424:1-438)
10 20 30 40 50 60
pF1KB9 MDSLQDTVALDHGGCCPALSRLVPRGFGTEMWTLFALSGPLFLFQVLTFMIYIVSTVFCG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MDSLQDTVALDHGGCCPALSRLVPRGFGTEMWTLFALSGPLFLFQVLTFMIYIVSTVFCG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 HLGKVELASVTLAVAFVNVCGVSVGVGLSSACDTLMSQSFGSPNKKHVGVILQRGALVLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HLGKVELASVTLAVAFVNVCGVSVGVGLSSACDTLMSQSFGSPNKKHVGVILQRGALVLL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 LCCLPCWALFLNTQHILLLFRQDPDVSRLTQDYVMIFIPGLPVIFLYNLLAKYLQNQGWL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LCCLPCWALFLNTQHILLLFRQDPDVSRLTQDYVMIFIPGLPVIFLYNLLAKYLQNQGWL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 KGQEEESPFQTPGLSILHPSHSHLSRASFHLFQKITWPQVLSGVVGNCVNGVANYALVSV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KGQEEESPFQTPGLSILHPSHSHLSRASFHLFQKITWPQVLSGVVGNCVNGVANYALVSV
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 LNLGVRGSAYANIISQFAQTVFLLLYIVLKKLHLETWAGWSSQCLQDWGPFFSLAVPSML
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LNLGVRGSAYANIISQFAQTVFLLLYIVLKKLHLETWAGWSSQCLQDWGPFFSLAVPSML
250 260 270 280 290 300
310 320 330 340
pF1KB9 MICVEWWAYEIGSFLMGLLSVVDLSAQAVIYEVATVTYM--------------IPLGLSI
::::::::::::::::::::::::::::::::::::::: :::::::
XP_016 MICVEWWAYEIGSFLMGLLSVVDLSAQAVIYEVATVTYMRHSHRLAYAAHVTRIPLGLSI
310 320 330 340 350 360
350 360 370 380 390 400
pF1KB9 GVCVRVGMALGAADTVQAKRSAVSGVLSIVGISLVLGTLISILKNQLGHIFTNDEDVIAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GVCVRVGMALGAADTVQAKRSAVSGVLSIVGISLVLGTLISILKNQLGHIFTNDEDVIAL
370 380 390 400 410 420
410 420 430 440 450 460
pF1KB9 VSQVLPVYSVFHVFEAICCVYGGVLRGTGKQAFGAAVNAITYYIIGLPLGILLTFVVRMR
::::::::::::::::::
XP_016 VSQVLPVYSVFHVFEAIC
430
>>XP_016879710 (OMIM: 609833) PREDICTED: multidrug and t (616 aa)
initn: 3934 init1: 2288 opt: 2293 Z-score: 2827.0 bits: 533.2 E(85289): 1e-150
Smith-Waterman score: 3910; 97.7% identity (97.7% similar) in 616 aa overlap (1-602:1-616)
10 20 30 40 50 60
pF1KB9 MDSLQDTVALDHGGCCPALSRLVPRGFGTEMWTLFALSGPLFLFQVLTFMIYIVSTVFCG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MDSLQDTVALDHGGCCPALSRLVPRGFGTEMWTLFALSGPLFLFQVLTFMIYIVSTVFCG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 HLGKVELASVTLAVAFVNVCGVSVGVGLSSACDTLMSQSFGSPNKKHVGVILQRGALVLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HLGKVELASVTLAVAFVNVCGVSVGVGLSSACDTLMSQSFGSPNKKHVGVILQRGALVLL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 LCCLPCWALFLNTQHILLLFRQDPDVSRLTQDYVMIFIPGLPVIFLYNLLAKYLQNQGWL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LCCLPCWALFLNTQHILLLFRQDPDVSRLTQDYVMIFIPGLPVIFLYNLLAKYLQNQGWL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 KGQEEESPFQTPGLSILHPSHSHLSRASFHLFQKITWPQVLSGVVGNCVNGVANYALVSV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KGQEEESPFQTPGLSILHPSHSHLSRASFHLFQKITWPQVLSGVVGNCVNGVANYALVSV
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 LNLGVRGSAYANIISQFAQTVFLLLYIVLKKLHLETWAGWSSQCLQDWGPFFSLAVPSML
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LNLGVRGSAYANIISQFAQTVFLLLYIVLKKLHLETWAGWSSQCLQDWGPFFSLAVPSML
250 260 270 280 290 300
310 320 330 340
pF1KB9 MICVEWWAYEIGSFLMGLLSVVDLSAQAVIYEVATVTYM--------------IPLGLSI
::::::::::::::::::::::::::::::::::::::: :::::::
XP_016 MICVEWWAYEIGSFLMGLLSVVDLSAQAVIYEVATVTYMRHSHRLAYAAHVTRIPLGLSI
310 320 330 340 350 360
350 360 370 380 390 400
pF1KB9 GVCVRVGMALGAADTVQAKRSAVSGVLSIVGISLVLGTLISILKNQLGHIFTNDEDVIAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GVCVRVGMALGAADTVQAKRSAVSGVLSIVGISLVLGTLISILKNQLGHIFTNDEDVIAL
370 380 390 400 410 420
410 420 430 440 450 460
pF1KB9 VSQVLPVYSVFHVFEAICCVYGGVLRGTGKQAFGAAVNAITYYIIGLPLGILLTFVVRMR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VSQVLPVYSVFHVFEAICCVYGGVLRGTGKQAFGAAVNAITYYIIGLPLGILLTFVVRMR
430 440 450 460 470 480
470 480 490 500 510 520
pF1KB9 IMGLWLGMLACVFLATAAFVAYTARLDWKLAAEEAKKHSGRQQQQRAESTATRPGPEKAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 IMGLWLGMLACVFLATAAFVAYTARLDWKLAAEEAKKHSGRQQQQRAESTATRPGPEKAV
490 500 510 520 530 540
530 540 550 560 570 580
pF1KB9 LSSVATGSSPGITLTTYSRSECHVDFFRTPEEAHALSAPTSRLSVKQLVIRRGAALGAAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LSSVATGSSPGITLTTYSRSECHVDFFRTPEEAHALSAPTSRLSVKQLVIRRGAALGAAS
550 560 570 580 590 600
590 600
pF1KB9 ATLMVGLTVRILATRH
::::::::::::::::
XP_016 ATLMVGLTVRILATRH
610
>>XP_016879715 (OMIM: 609833) PREDICTED: multidrug and t (351 aa)
initn: 2288 init1: 2288 opt: 2289 Z-score: 2826.0 bits: 532.2 E(85289): 1.1e-150
Smith-Waterman score: 2289; 99.1% identity (99.1% similar) in 345 aa overlap (1-344:1-345)
10 20 30 40 50 60
pF1KB9 MDSLQDTVALDHGGCCPALSRLVPRGFGTEMWTLFALSGPLFLFQVLTFMIYIVSTVFCG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MDSLQDTVALDHGGCCPALSRLVPRGFGTEMWTLFALSGPLFLFQVLTFMIYIVSTVFCG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 HLGKVELASVTLAVAFVNVCGVSVGVGLSSACDTLMSQSFGSPNKKHVGVILQRGALVLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HLGKVELASVTLAVAFVNVCGVSVGVGLSSACDTLMSQSFGSPNKKHVGVILQRGALVLL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 LCCLPCWALFLNTQHILLLFRQDPDVSRLTQDYVMIFIPGLPVIFLYNLLAKYLQNQGWL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LCCLPCWALFLNTQHILLLFRQDPDVSRLTQDYVMIFIPGLPVIFLYNLLAKYLQNQGWL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 KGQEEESPFQTPGLSILHPSHSHLSRASFHLFQKITWPQVLSGVVGNCVNGVANYALVSV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KGQEEESPFQTPGLSILHPSHSHLSRASFHLFQKITWPQVLSGVVGNCVNGVANYALVSV
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 LNLGVRGSAYANIISQFAQTVFLLLYIVLKKLHLETWAGWSSQCLQDWGPFFSLAVPSML
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LNLGVRGSAYANIISQFAQTVFLLLYIVLKKLHLETWAGWSSQCLQDWGPFFSLAVPSML
250 260 270 280 290 300
310 320 330 340 350
pF1KB9 MICVEWWAYEIGSFLMGLLSVVDLSAQAVIYEVATVTYMIP-LGLSIGVCVRVGMALGAA
::::::::::::::::::::::::::::::::::::::: :::
XP_016 MICVEWWAYEIGSFLMGLLSVVDLSAQAVIYEVATVTYMGAFLGLRPQSPL
310 320 330 340 350
360 370 380 390 400 410
pF1KB9 DTVQAKRSAVSGVLSIVGISLVLGTLISILKNQLGHIFTNDEDVIALVSQVLPVYSVFHV
>>XP_016879711 (OMIM: 609833) PREDICTED: multidrug and t (567 aa)
initn: 3591 init1: 1945 opt: 1950 Z-score: 2404.0 bits: 454.8 E(85289): 3.7e-127
Smith-Waterman score: 3567; 97.5% identity (97.5% similar) in 567 aa overlap (50-602:1-567)
20 30 40 50 60 70
pF1KB9 SRLVPRGFGTEMWTLFALSGPLFLFQVLTFMIYIVSTVFCGHLGKVELASVTLAVAFVNV
::::::::::::::::::::::::::::::
XP_016 MIYIVSTVFCGHLGKVELASVTLAVAFVNV
10 20 30
80 90 100 110 120 130
pF1KB9 CGVSVGVGLSSACDTLMSQSFGSPNKKHVGVILQRGALVLLLCCLPCWALFLNTQHILLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 CGVSVGVGLSSACDTLMSQSFGSPNKKHVGVILQRGALVLLLCCLPCWALFLNTQHILLL
40 50 60 70 80 90
140 150 160 170 180 190
pF1KB9 FRQDPDVSRLTQDYVMIFIPGLPVIFLYNLLAKYLQNQGWLKGQEEESPFQTPGLSILHP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 FRQDPDVSRLTQDYVMIFIPGLPVIFLYNLLAKYLQNQGWLKGQEEESPFQTPGLSILHP
100 110 120 130 140 150
200 210 220 230 240 250
pF1KB9 SHSHLSRASFHLFQKITWPQVLSGVVGNCVNGVANYALVSVLNLGVRGSAYANIISQFAQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SHSHLSRASFHLFQKITWPQVLSGVVGNCVNGVANYALVSVLNLGVRGSAYANIISQFAQ
160 170 180 190 200 210
260 270 280 290 300 310
pF1KB9 TVFLLLYIVLKKLHLETWAGWSSQCLQDWGPFFSLAVPSMLMICVEWWAYEIGSFLMGLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TVFLLLYIVLKKLHLETWAGWSSQCLQDWGPFFSLAVPSMLMICVEWWAYEIGSFLMGLL
220 230 240 250 260 270
320 330 340 350 360
pF1KB9 SVVDLSAQAVIYEVATVTYM--------------IPLGLSIGVCVRVGMALGAADTVQAK
:::::::::::::::::::: ::::::::::::::::::::::::::
XP_016 SVVDLSAQAVIYEVATVTYMRHSHRLAYAAHVTRIPLGLSIGVCVRVGMALGAADTVQAK
280 290 300 310 320 330
370 380 390 400 410 420
pF1KB9 RSAVSGVLSIVGISLVLGTLISILKNQLGHIFTNDEDVIALVSQVLPVYSVFHVFEAICC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RSAVSGVLSIVGISLVLGTLISILKNQLGHIFTNDEDVIALVSQVLPVYSVFHVFEAICC
340 350 360 370 380 390
430 440 450 460 470 480
pF1KB9 VYGGVLRGTGKQAFGAAVNAITYYIIGLPLGILLTFVVRMRIMGLWLGMLACVFLATAAF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VYGGVLRGTGKQAFGAAVNAITYYIIGLPLGILLTFVVRMRIMGLWLGMLACVFLATAAF
400 410 420 430 440 450
490 500 510 520 530 540
pF1KB9 VAYTARLDWKLAAEEAKKHSGRQQQQRAESTATRPGPEKAVLSSVATGSSPGITLTTYSR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VAYTARLDWKLAAEEAKKHSGRQQQQRAESTATRPGPEKAVLSSVATGSSPGITLTTYSR
460 470 480 490 500 510
550 560 570 580 590 600
pF1KB9 SECHVDFFRTPEEAHALSAPTSRLSVKQLVIRRGAALGAASATLMVGLTVRILATRH
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SECHVDFFRTPEEAHALSAPTSRLSVKQLVIRRGAALGAASATLMVGLTVRILATRH
520 530 540 550 560
>>NP_001243592 (OMIM: 609833) multidrug and toxin extrus (580 aa)
initn: 2840 init1: 1660 opt: 1662 Z-score: 2048.2 bits: 389.0 E(85289): 2.4e-107
Smith-Waterman score: 3573; 91.9% identity (91.9% similar) in 616 aa overlap (1-602:1-580)
10 20 30 40 50 60
pF1KB9 MDSLQDTVALDHGGCCPALSRLVPRGFGTEMWTLFALSGPLFLFQVLTFMIYIVSTVFCG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MDSLQDTVALDHGGCCPALSRLVPRGFGTEMWTLFALSGPLFLFQVLTFMIYIVSTVFCG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 HLGKVELASVTLAVAFVNVCGVSVGVGLSSACDTLMSQSFGSPNKKHVGVILQRGALVLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HLGKVELASVTLAVAFVNVCGVSVGVGLSSACDTLMSQSFGSPNKKHVGVILQRGALVLL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 LCCLPCWALFLNTQHILLLFRQDPDVSRLTQDYVMIFIPGLPVIFLYNLLAKYLQNQGWL
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LCCLPCWALFLNTQHILLLFRQDPDVSRLTQDYVMIFIPGLPVIFLYNLLAKYLQNQ---
130 140 150 160 170
190 200 210 220 230 240
pF1KB9 KGQEEESPFQTPGLSILHPSHSHLSRASFHLFQKITWPQVLSGVVGNCVNGVANYALVSV
:::::::::::::::::::::::::::
NP_001 ---------------------------------KITWPQVLSGVVGNCVNGVANYALVSV
180 190 200
250 260 270 280 290 300
pF1KB9 LNLGVRGSAYANIISQFAQTVFLLLYIVLKKLHLETWAGWSSQCLQDWGPFFSLAVPSML
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LNLGVRGSAYANIISQFAQTVFLLLYIVLKKLHLETWAGWSSQCLQDWGPFFSLAVPSML
210 220 230 240 250 260
310 320 330 340
pF1KB9 MICVEWWAYEIGSFLMGLLSVVDLSAQAVIYEVATVTYM--------------IPLGLSI
::::::::::::::::::::::::::::::::::::::: :::::::
NP_001 MICVEWWAYEIGSFLMGLLSVVDLSAQAVIYEVATVTYMRHSHRLAYAAHVTRIPLGLSI
270 280 290 300 310 320
350 360 370 380 390 400
pF1KB9 GVCVRVGMALGAADTVQAKRSAVSGVLSIVGISLVLGTLISILKNQLGHIFTNDEDVIAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GVCVRVGMALGAADTVQAKRSAVSGVLSIVGISLVLGTLISILKNQLGHIFTNDEDVIAL
330 340 350 360 370 380
410 420 430 440 450 460
pF1KB9 VSQVLPVYSVFHVFEAICCVYGGVLRGTGKQAFGAAVNAITYYIIGLPLGILLTFVVRMR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VSQVLPVYSVFHVFEAICCVYGGVLRGTGKQAFGAAVNAITYYIIGLPLGILLTFVVRMR
390 400 410 420 430 440
470 480 490 500 510 520
pF1KB9 IMGLWLGMLACVFLATAAFVAYTARLDWKLAAEEAKKHSGRQQQQRAESTATRPGPEKAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IMGLWLGMLACVFLATAAFVAYTARLDWKLAAEEAKKHSGRQQQQRAESTATRPGPEKAV
450 460 470 480 490 500
530 540 550 560 570 580
pF1KB9 LSSVATGSSPGITLTTYSRSECHVDFFRTPEEAHALSAPTSRLSVKQLVIRRGAALGAAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LSSVATGSSPGITLTTYSRSECHVDFFRTPEEAHALSAPTSRLSVKQLVIRRGAALGAAS
510 520 530 540 550 560
590 600
pF1KB9 ATLMVGLTVRILATRH
::::::::::::::::
NP_001 ATLMVGLTVRILATRH
570 580
>>NP_060712 (OMIM: 609832) multidrug and toxin extrusion (570 aa)
initn: 1085 init1: 1085 opt: 1116 Z-score: 1374.0 bits: 264.2 E(85289): 8.5e-70
Smith-Waterman score: 1774; 48.3% identity (73.5% similar) in 592 aa overlap (13-596:22-564)
10 20 30 40 50
pF1KB9 MDSLQDTVALDHGGCCPALSRLVPRGFGTEMWTLFALSGPLFLFQVLTFMI
:. : :: .: :. .:..:.:: :: :...:.:
NP_060 MEAPEEPAPVRGGPEATLEVRGSRCLRLS-----AFREELRALLVLAGPAFLVQLMVFLI
10 20 30 40 50
60 70 80 90 100 110
pF1KB9 YIVSTVFCGHLGKVELASVTLAVAFVNVCGVSVGVGLSSACDTLMSQSFGSPNKKHVGVI
..:.::::::::.:: .::::.: .:: ::::: :::::::::.::..:: : ::::::
NP_060 SFISSVFCGHLGKLELDAVTLAIAVINVTGVSVGFGLSSACDTLISQTYGSQNLKHVGVI
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB9 LQRGALVLLLCCLPCWALFLNTQHILLLFRQDPDVSRLTQDYVMIFIPGLPVIFLYNLLA
:::.::::::::.::::::::::::::::::::::::::: :: ::::.::. ::: : .
NP_060 LQRSALVLLLCCFPCWALFLNTQHILLLFRQDPDVSRLTQTYVTIFIPALPATFLYMLQV
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB9 KYLQNQGWLKGQEEESPFQTPGLSILHPSHSHLSRASFHLFQKITWPQVLSGVVGNCVNG
::: ::: :. ::...::..: ::.
NP_060 KYLLNQG------------------------------------IVLPQIVTGVAANLVNA
180 190
240 250 260 270 280 290
pF1KB9 VANYALVSVLNLGVRGSAYANIISQFAQTVFLLLYIVLKKLHLETWAGWSSQCLQDWGPF
.::: .. :.::: ::: ::.:::.. ...:.:::. :::: ::.::: .:::::. :
NP_060 LANYLFLHQLHLGVIGSALANLISQYTLALLLFLYILGKKLHQATWGGWSLECLQDWASF
200 210 220 230 240 250
300 310 320 330 340 350
pF1KB9 FSLAVPSMLMICVEWWAYEIGSFLMGLLSVVDLSAQAVIYEVATVTYMIPLGLSIGVCVR
. ::.:::::.:.::::::.:::: :.:..:.:.::...::.: ..::.: :.:... ::
NP_060 LRLAIPSMLMLCMEWWAYEVGSFLSGILGMVELGAQSIVYELAIIVYMVPAGFSVAASVR
260 270 280 290 300 310
360 370 380 390 400 410
pF1KB9 VGMALGAADTVQAKRSAVSGVLSIVGISLVLGTLISILKNQLGHIFTNDEDVIALVSQVL
:: ::::.: ::..:.. ..: : .......:. :...:.:::.:.:.: ::.::.
NP_060 VGNALGAGDMEQARKSSTVSLLITVLFAVAFSVLLLSCKDHVGYIFTTDRDIINLVAQVV
320 330 340 350 360 370
420 430 440 450 460 470
pF1KB9 PVYSVFHVFEAICCVYGGVLRGTGKQAFGAAVNAITYYIIGLPLGILLTFVVRMRIMGLW
:.:.: :.:::. :. ::::::.:.: :: ::.: ::..:::.:: : :.. . .::::
NP_060 PIYAVSHLFEALACTSGGVLRGSGNQKVGAIVNTIGYYVVGLPIGIALMFATTLGVMGLW
380 390 400 410 420 430
480 490 500 510 520
pF1KB9 LGMLACVFLATAAFVAYTARLDWKLAAEEAKKHSGRQQQQ--RAESTAT-----RPG-PE
:.. :. . .. :... .:.:: : ..:. :.. . .. :. ..: .:: ::
NP_060 SGIIICTVFQAVCFLGFIIQLNWKKACQQAQVHANLKVNNVPRSGNSALPQDPLHPGCPE
440 450 460 470 480 490
530 540 550 560 570 580
pF1KB9 KAVLSSVATGSSPGITLTTYSRSECHVDFFRTPEEAHALSAPTSRLSVKQLVIRRGAALG
. : .. : .. : : : .. . . : : .. ..:: ::::.::: :
NP_060 N--LEGILT-NDVGKTGEPQSDQQMRQE---EPLPEHPQDG--AKLSRKQLVLRRGLLLL
500 510 520 530 540 550
590 600
pF1KB9 AASATLMVGLTVRILATRH
.. :.::. ::
NP_060 GVFLILLVGILVRFYVRIQ
560 570
602 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 19:05:43 2016 done: Sat Nov 5 19:05:44 2016
Total Scan time: 10.390 Total Display time: 0.120
Function used was FASTA [36.3.4 Apr, 2011]