FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KB9096, 602 aa 1>>>pF1KB9096 602 - 602 aa - 602 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.6247+/-0.000859; mu= 17.1482+/- 0.051 mean_var=65.0182+/-13.449, 0's: 0 Z-trim(105.5): 21 B-trim: 36 in 1/49 Lambda= 0.159058 statistics sampled from 8425 (8438) to 8425 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.613), E-opt: 0.2 (0.259), width: 16 Scan time: 3.620 The best scores are: opt bits E(32554) CCDS11211.1 SLC47A2 gene_id:146802|Hs108|chr17 ( 602) 3948 915.0 0 CCDS58530.1 SLC47A2 gene_id:146802|Hs108|chr17 ( 580) 1662 390.4 3.3e-108 CCDS11209.1 SLC47A1 gene_id:55244|Hs108|chr17 ( 570) 1116 265.1 1.7e-70 >>CCDS11211.1 SLC47A2 gene_id:146802|Hs108|chr17 (602 aa) initn: 3948 init1: 3948 opt: 3948 Z-score: 4890.8 bits: 915.0 E(32554): 0 Smith-Waterman score: 3948; 100.0% identity (100.0% similar) in 602 aa overlap (1-602:1-602) 10 20 30 40 50 60 pF1KB9 MDSLQDTVALDHGGCCPALSRLVPRGFGTEMWTLFALSGPLFLFQVLTFMIYIVSTVFCG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 MDSLQDTVALDHGGCCPALSRLVPRGFGTEMWTLFALSGPLFLFQVLTFMIYIVSTVFCG 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB9 HLGKVELASVTLAVAFVNVCGVSVGVGLSSACDTLMSQSFGSPNKKHVGVILQRGALVLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 HLGKVELASVTLAVAFVNVCGVSVGVGLSSACDTLMSQSFGSPNKKHVGVILQRGALVLL 70 80 90 100 110 120 130 140 150 160 170 180 pF1KB9 LCCLPCWALFLNTQHILLLFRQDPDVSRLTQDYVMIFIPGLPVIFLYNLLAKYLQNQGWL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 LCCLPCWALFLNTQHILLLFRQDPDVSRLTQDYVMIFIPGLPVIFLYNLLAKYLQNQGWL 130 140 150 160 170 180 190 200 210 220 230 240 pF1KB9 KGQEEESPFQTPGLSILHPSHSHLSRASFHLFQKITWPQVLSGVVGNCVNGVANYALVSV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 KGQEEESPFQTPGLSILHPSHSHLSRASFHLFQKITWPQVLSGVVGNCVNGVANYALVSV 190 200 210 220 230 240 250 260 270 280 290 300 pF1KB9 LNLGVRGSAYANIISQFAQTVFLLLYIVLKKLHLETWAGWSSQCLQDWGPFFSLAVPSML :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 LNLGVRGSAYANIISQFAQTVFLLLYIVLKKLHLETWAGWSSQCLQDWGPFFSLAVPSML 250 260 270 280 290 300 310 320 330 340 350 360 pF1KB9 MICVEWWAYEIGSFLMGLLSVVDLSAQAVIYEVATVTYMIPLGLSIGVCVRVGMALGAAD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 MICVEWWAYEIGSFLMGLLSVVDLSAQAVIYEVATVTYMIPLGLSIGVCVRVGMALGAAD 310 320 330 340 350 360 370 380 390 400 410 420 pF1KB9 TVQAKRSAVSGVLSIVGISLVLGTLISILKNQLGHIFTNDEDVIALVSQVLPVYSVFHVF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 TVQAKRSAVSGVLSIVGISLVLGTLISILKNQLGHIFTNDEDVIALVSQVLPVYSVFHVF 370 380 390 400 410 420 430 440 450 460 470 480 pF1KB9 EAICCVYGGVLRGTGKQAFGAAVNAITYYIIGLPLGILLTFVVRMRIMGLWLGMLACVFL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 EAICCVYGGVLRGTGKQAFGAAVNAITYYIIGLPLGILLTFVVRMRIMGLWLGMLACVFL 430 440 450 460 470 480 490 500 510 520 530 540 pF1KB9 ATAAFVAYTARLDWKLAAEEAKKHSGRQQQQRAESTATRPGPEKAVLSSVATGSSPGITL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 ATAAFVAYTARLDWKLAAEEAKKHSGRQQQQRAESTATRPGPEKAVLSSVATGSSPGITL 490 500 510 520 530 540 550 560 570 580 590 600 pF1KB9 TTYSRSECHVDFFRTPEEAHALSAPTSRLSVKQLVIRRGAALGAASATLMVGLTVRILAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 TTYSRSECHVDFFRTPEEAHALSAPTSRLSVKQLVIRRGAALGAASATLMVGLTVRILAT 550 560 570 580 590 600 pF1KB9 RH :: CCDS11 RH >>CCDS58530.1 SLC47A2 gene_id:146802|Hs108|chr17 (580 aa) initn: 2840 init1: 1660 opt: 1662 Z-score: 2056.0 bits: 390.4 E(32554): 3.3e-108 Smith-Waterman score: 3573; 91.9% identity (91.9% similar) in 616 aa overlap (1-602:1-580) 10 20 30 40 50 60 pF1KB9 MDSLQDTVALDHGGCCPALSRLVPRGFGTEMWTLFALSGPLFLFQVLTFMIYIVSTVFCG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 MDSLQDTVALDHGGCCPALSRLVPRGFGTEMWTLFALSGPLFLFQVLTFMIYIVSTVFCG 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB9 HLGKVELASVTLAVAFVNVCGVSVGVGLSSACDTLMSQSFGSPNKKHVGVILQRGALVLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 HLGKVELASVTLAVAFVNVCGVSVGVGLSSACDTLMSQSFGSPNKKHVGVILQRGALVLL 70 80 90 100 110 120 130 140 150 160 170 180 pF1KB9 LCCLPCWALFLNTQHILLLFRQDPDVSRLTQDYVMIFIPGLPVIFLYNLLAKYLQNQGWL ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 LCCLPCWALFLNTQHILLLFRQDPDVSRLTQDYVMIFIPGLPVIFLYNLLAKYLQNQ--- 130 140 150 160 170 190 200 210 220 230 240 pF1KB9 KGQEEESPFQTPGLSILHPSHSHLSRASFHLFQKITWPQVLSGVVGNCVNGVANYALVSV ::::::::::::::::::::::::::: CCDS58 ---------------------------------KITWPQVLSGVVGNCVNGVANYALVSV 180 190 200 250 260 270 280 290 300 pF1KB9 LNLGVRGSAYANIISQFAQTVFLLLYIVLKKLHLETWAGWSSQCLQDWGPFFSLAVPSML :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 LNLGVRGSAYANIISQFAQTVFLLLYIVLKKLHLETWAGWSSQCLQDWGPFFSLAVPSML 210 220 230 240 250 260 310 320 330 340 pF1KB9 MICVEWWAYEIGSFLMGLLSVVDLSAQAVIYEVATVTYM--------------IPLGLSI ::::::::::::::::::::::::::::::::::::::: ::::::: CCDS58 MICVEWWAYEIGSFLMGLLSVVDLSAQAVIYEVATVTYMRHSHRLAYAAHVTRIPLGLSI 270 280 290 300 310 320 350 360 370 380 390 400 pF1KB9 GVCVRVGMALGAADTVQAKRSAVSGVLSIVGISLVLGTLISILKNQLGHIFTNDEDVIAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 GVCVRVGMALGAADTVQAKRSAVSGVLSIVGISLVLGTLISILKNQLGHIFTNDEDVIAL 330 340 350 360 370 380 410 420 430 440 450 460 pF1KB9 VSQVLPVYSVFHVFEAICCVYGGVLRGTGKQAFGAAVNAITYYIIGLPLGILLTFVVRMR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 VSQVLPVYSVFHVFEAICCVYGGVLRGTGKQAFGAAVNAITYYIIGLPLGILLTFVVRMR 390 400 410 420 430 440 470 480 490 500 510 520 pF1KB9 IMGLWLGMLACVFLATAAFVAYTARLDWKLAAEEAKKHSGRQQQQRAESTATRPGPEKAV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 IMGLWLGMLACVFLATAAFVAYTARLDWKLAAEEAKKHSGRQQQQRAESTATRPGPEKAV 450 460 470 480 490 500 530 540 550 560 570 580 pF1KB9 LSSVATGSSPGITLTTYSRSECHVDFFRTPEEAHALSAPTSRLSVKQLVIRRGAALGAAS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 LSSVATGSSPGITLTTYSRSECHVDFFRTPEEAHALSAPTSRLSVKQLVIRRGAALGAAS 510 520 530 540 550 560 590 600 pF1KB9 ATLMVGLTVRILATRH :::::::::::::::: CCDS58 ATLMVGLTVRILATRH 570 580 >>CCDS11209.1 SLC47A1 gene_id:55244|Hs108|chr17 (570 aa) initn: 1085 init1: 1085 opt: 1116 Z-score: 1379.0 bits: 265.1 E(32554): 1.7e-70 Smith-Waterman score: 1774; 48.3% identity (73.5% similar) in 592 aa overlap (13-596:22-564) 10 20 30 40 50 pF1KB9 MDSLQDTVALDHGGCCPALSRLVPRGFGTEMWTLFALSGPLFLFQVLTFMI :. : :: .: :. .:..:.:: :: :...:.: CCDS11 MEAPEEPAPVRGGPEATLEVRGSRCLRLS-----AFREELRALLVLAGPAFLVQLMVFLI 10 20 30 40 50 60 70 80 90 100 110 pF1KB9 YIVSTVFCGHLGKVELASVTLAVAFVNVCGVSVGVGLSSACDTLMSQSFGSPNKKHVGVI ..:.::::::::.:: .::::.: .:: ::::: :::::::::.::..:: : :::::: CCDS11 SFISSVFCGHLGKLELDAVTLAIAVINVTGVSVGFGLSSACDTLISQTYGSQNLKHVGVI 60 70 80 90 100 110 120 130 140 150 160 170 pF1KB9 LQRGALVLLLCCLPCWALFLNTQHILLLFRQDPDVSRLTQDYVMIFIPGLPVIFLYNLLA :::.::::::::.::::::::::::::::::::::::::: :: ::::.::. ::: : . CCDS11 LQRSALVLLLCCFPCWALFLNTQHILLLFRQDPDVSRLTQTYVTIFIPALPATFLYMLQV 120 130 140 150 160 170 180 190 200 210 220 230 pF1KB9 KYLQNQGWLKGQEEESPFQTPGLSILHPSHSHLSRASFHLFQKITWPQVLSGVVGNCVNG ::: ::: :. ::...::..: ::. CCDS11 KYLLNQG------------------------------------IVLPQIVTGVAANLVNA 180 190 240 250 260 270 280 290 pF1KB9 VANYALVSVLNLGVRGSAYANIISQFAQTVFLLLYIVLKKLHLETWAGWSSQCLQDWGPF .::: .. :.::: ::: ::.:::.. ...:.:::. :::: ::.::: .:::::. : CCDS11 LANYLFLHQLHLGVIGSALANLISQYTLALLLFLYILGKKLHQATWGGWSLECLQDWASF 200 210 220 230 240 250 300 310 320 330 340 350 pF1KB9 FSLAVPSMLMICVEWWAYEIGSFLMGLLSVVDLSAQAVIYEVATVTYMIPLGLSIGVCVR . ::.:::::.:.::::::.:::: :.:..:.:.::...::.: ..::.: :.:... :: CCDS11 LRLAIPSMLMLCMEWWAYEVGSFLSGILGMVELGAQSIVYELAIIVYMVPAGFSVAASVR 260 270 280 290 300 310 360 370 380 390 400 410 pF1KB9 VGMALGAADTVQAKRSAVSGVLSIVGISLVLGTLISILKNQLGHIFTNDEDVIALVSQVL :: ::::.: ::..:.. ..: : .......:. :...:.:::.:.:.: ::.::. CCDS11 VGNALGAGDMEQARKSSTVSLLITVLFAVAFSVLLLSCKDHVGYIFTTDRDIINLVAQVV 320 330 340 350 360 370 420 430 440 450 460 470 pF1KB9 PVYSVFHVFEAICCVYGGVLRGTGKQAFGAAVNAITYYIIGLPLGILLTFVVRMRIMGLW :.:.: :.:::. :. ::::::.:.: :: ::.: ::..:::.:: : :.. . .:::: CCDS11 PIYAVSHLFEALACTSGGVLRGSGNQKVGAIVNTIGYYVVGLPIGIALMFATTLGVMGLW 380 390 400 410 420 430 480 490 500 510 520 pF1KB9 LGMLACVFLATAAFVAYTARLDWKLAAEEAKKHSGRQQQQ--RAESTAT-----RPG-PE :.. :. . .. :... .:.:: : ..:. :.. . .. :. ..: .:: :: CCDS11 SGIIICTVFQAVCFLGFIIQLNWKKACQQAQVHANLKVNNVPRSGNSALPQDPLHPGCPE 440 450 460 470 480 490 530 540 550 560 570 580 pF1KB9 KAVLSSVATGSSPGITLTTYSRSECHVDFFRTPEEAHALSAPTSRLSVKQLVIRRGAALG . : .. : .. : : : .. . . : : .. ..:: ::::.::: : CCDS11 N--LEGILT-NDVGKTGEPQSDQQMRQE---EPLPEHPQDG--AKLSRKQLVLRRGLLLL 500 510 520 530 540 550 590 600 pF1KB9 AASATLMVGLTVRILATRH .. :.::. :: CCDS11 GVFLILLVGILVRFYVRIQ 560 570 602 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sat Nov 5 19:05:42 2016 done: Sat Nov 5 19:05:43 2016 Total Scan time: 3.620 Total Display time: 0.020 Function used was FASTA [36.3.4 Apr, 2011]