Result of FASTA (ccds) for
pFN21AE3153
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE3153, 369 aa
1>>>pF1KE3153 369 - 369 aa - 369 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.7130+/- 0.001; mu= 14.2342+/- 0.060
mean_var=66.1068+/-13.136, 0's: 0 Z-trim(103.7): 24 B-trim: 0 in 0/50
Lambda= 0.157743
statistics sampled from 7534 (7547) to 7534 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.602), E-opt: 0.2 (0.232), width: 16
Scan time: 2.640
The best scores are: opt bits E(32554)
CCDS11200.1 PRPSAP2 gene_id:5636|Hs108|chr17 ( 369) 2376 549.8 1.4e-156
CCDS58526.1 PRPSAP2 gene_id:5636|Hs108|chr17 ( 329) 1873 435.3 3.6e-122
CCDS11743.2 PRPSAP1 gene_id:5635|Hs108|chr17 ( 385) 1867 434.0 1.1e-121
CCDS58527.1 PRPSAP2 gene_id:5636|Hs108|chr17 ( 283) 1831 425.7 2.4e-119
CCDS58525.1 PRPSAP2 gene_id:5636|Hs108|chr17 ( 320) 1735 403.9 1e-112
CCDS82209.1 PRPSAP1 gene_id:5635|Hs108|chr17 ( 282) 1558 363.6 1.2e-100
CCDS14150.1 PRPS2 gene_id:5634|Hs108|chrX ( 318) 375 94.4 1.5e-19
CCDS43918.1 PRPS2 gene_id:5634|Hs108|chrX ( 321) 375 94.4 1.5e-19
CCDS76007.1 PRPS1 gene_id:5631|Hs108|chrX ( 114) 362 91.3 4.5e-19
CCDS47552.1 PRPS1L1 gene_id:221823|Hs108|chr7 ( 318) 366 92.3 6.1e-19
CCDS14529.1 PRPS1 gene_id:5631|Hs108|chrX ( 318) 366 92.3 6.1e-19
>>CCDS11200.1 PRPSAP2 gene_id:5636|Hs108|chr17 (369 aa)
initn: 2376 init1: 2376 opt: 2376 Z-score: 2924.6 bits: 549.8 E(32554): 1.4e-156
Smith-Waterman score: 2376; 100.0% identity (100.0% similar) in 369 aa overlap (1-369:1-369)
10 20 30 40 50 60
pF1KE3 MFCVTPPELETKMNITKGGLVLFSANSNSSCMELSKKIAERLGVEMGKVQVYQEPNRETR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 MFCVTPPELETKMNITKGGLVLFSANSNSSCMELSKKIAERLGVEMGKVQVYQEPNRETR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 VQIQESVRGKDVFIIQTVSKDVNTTIMELLIMVYACKTSCAKSIIGVIPYFPYSKQCKMR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 VQIQESVRGKDVFIIQTVSKDVNTTIMELLIMVYACKTSCAKSIIGVIPYFPYSKQCKMR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 KRGSIVSKLLASMMCKAGLTHLITMDLHQKEIQGFFNIPVDNLRASPFLLQYIQEEIPDY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 KRGSIVSKLLASMMCKAGLTHLITMDLHQKEIQGFFNIPVDNLRASPFLLQYIQEEIPDY
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE3 RNAVIVAKSPASAKRAQSFAERLRLGIAVIHGEAQDAESDLVDGRHSPPMVRSVAAIHPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 RNAVIVAKSPASAKRAQSFAERLRLGIAVIHGEAQDAESDLVDGRHSPPMVRSVAAIHPS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE3 LEIPMLIPKEKPPITVVGDVGGRIAIIVDDIIDDVDSFLAAAETLKERGAYKIFVMATHG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 LEIPMLIPKEKPPITVVGDVGGRIAIIVDDIIDDVDSFLAAAETLKERGAYKIFVMATHG
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE3 LLSSDAPRRIEESAIDEVVVTNTIPHEVQKLQCPKIKTVDISMILSEAIRRIHNGESMSY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 LLSSDAPRRIEESAIDEVVVTNTIPHEVQKLQCPKIKTVDISMILSEAIRRIHNGESMSY
310 320 330 340 350 360
pF1KE3 LFRNIGLDD
:::::::::
CCDS11 LFRNIGLDD
>>CCDS58526.1 PRPSAP2 gene_id:5636|Hs108|chr17 (329 aa)
initn: 1873 init1: 1873 opt: 1873 Z-score: 2306.8 bits: 435.3 E(32554): 3.6e-122
Smith-Waterman score: 2034; 89.2% identity (89.2% similar) in 369 aa overlap (1-369:1-329)
10 20 30 40 50 60
pF1KE3 MFCVTPPELETKMNITKGGLVLFSANSNSSCMELSKKIAERLGVEMGKVQVYQEPNRETR
::::::::::::::::::::::::::::::::::::::::
CCDS58 MFCVTPPELETKMNITKGGLVLFSANSNSSCMELSKKIAE--------------------
10 20 30 40
70 80 90 100 110 120
pF1KE3 VQIQESVRGKDVFIIQTVSKDVNTTIMELLIMVYACKTSCAKSIIGVIPYFPYSKQCKMR
::::::::::::::::::::::::::::::::::::::::
CCDS58 --------------------DVNTTIMELLIMVYACKTSCAKSIIGVIPYFPYSKQCKMR
50 60 70 80
130 140 150 160 170 180
pF1KE3 KRGSIVSKLLASMMCKAGLTHLITMDLHQKEIQGFFNIPVDNLRASPFLLQYIQEEIPDY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 KRGSIVSKLLASMMCKAGLTHLITMDLHQKEIQGFFNIPVDNLRASPFLLQYIQEEIPDY
90 100 110 120 130 140
190 200 210 220 230 240
pF1KE3 RNAVIVAKSPASAKRAQSFAERLRLGIAVIHGEAQDAESDLVDGRHSPPMVRSVAAIHPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 RNAVIVAKSPASAKRAQSFAERLRLGIAVIHGEAQDAESDLVDGRHSPPMVRSVAAIHPS
150 160 170 180 190 200
250 260 270 280 290 300
pF1KE3 LEIPMLIPKEKPPITVVGDVGGRIAIIVDDIIDDVDSFLAAAETLKERGAYKIFVMATHG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 LEIPMLIPKEKPPITVVGDVGGRIAIIVDDIIDDVDSFLAAAETLKERGAYKIFVMATHG
210 220 230 240 250 260
310 320 330 340 350 360
pF1KE3 LLSSDAPRRIEESAIDEVVVTNTIPHEVQKLQCPKIKTVDISMILSEAIRRIHNGESMSY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 LLSSDAPRRIEESAIDEVVVTNTIPHEVQKLQCPKIKTVDISMILSEAIRRIHNGESMSY
270 280 290 300 310 320
pF1KE3 LFRNIGLDD
:::::::::
CCDS58 LFRNIGLDD
>>CCDS11743.2 PRPSAP1 gene_id:5635|Hs108|chr17 (385 aa)
initn: 1860 init1: 1118 opt: 1867 Z-score: 2298.3 bits: 434.0 E(32554): 1.1e-121
Smith-Waterman score: 1867; 77.3% identity (92.1% similar) in 366 aa overlap (4-369:25-385)
10 20 30
pF1KE3 MFCVTPPELETKMNITKGGLVLFSANSNSSCMELSKKIA
: :: :: .. : .:::::...: ::.:.:.
CCDS11 MPKKLLLLPPPSASSAFRVPRARPVPPPA----MNAARTGYRVFSANSTAACTELAKRIT
10 20 30 40 50
40 50 60 70 80 90
pF1KE3 ERLGVEMGKVQVYQEPNRETRVQIQESVRGKDVFIIQTVSKDVNTTIMELLIMVYACKTS
::::.:.:: :::: : ::::.:.:::::.:.:::::. .::::..::::::.:: ::.
CCDS11 ERLGAELGKSVVYQETNGETRVEIKESVRGQDIFIIQTIPRDVNTAVMELLIMAYALKTA
60 70 80 90 100 110
100 110 120 130 140 150
pF1KE3 CAKSIIGVIPYFPYSKQCKMRKRGSIVSKLLASMMCKAGLTHLITMDLHQKEIQGFFNIP
::..::::::::::::: ::::::::: ::::::. ::::::.::::::::::::::..:
CCDS11 CARNIIGVIPYFPYSKQSKMRKRGSIVCKLLASMLAKAGLTHIITMDLHQKEIQGFFSFP
120 130 140 150 160 170
160 170 180 190 200 210
pF1KE3 VDNLRASPFLLQYIQEEIPDYRNAVIVAKSPASAKRAQSFAERLRLGIAVIHGEAQDAES
:::::::::::::::::::.::::::::::: .::::::.:::::::.:::::::: .:
CCDS11 VDNLRASPFLLQYIQEEIPNYRNAVIVAKSPDAAKRAQSYAERLRLGLAVIHGEAQCTEL
180 190 200 210 220 230
220 230 240 250 260 270
pF1KE3 DLVDGRHSPPMVRSVAAIHPSLEIPMLIPKEKPPITVVGDVGGRIAIIVDDIIDDVDSFL
:. :::::::::.. :..::.::.:... :::::::::::::::::::::::::::.::.
CCDS11 DMDDGRHSPPMVKN-ATVHPGLELPLMMAKEKPPITVVGDVGGRIAIIVDDIIDDVESFV
240 250 260 270 280 290
280 290 300 310 320 330
pF1KE3 AAAETLKERGAYKIFVMATHGLLSSDAPRRIEESAIDEVVVTNTIPHEVQKLQCPKIKTV
:::: :::::::::.::::::.::..::: ::::..::::::::.:::::::::::::::
CCDS11 AAAEILKERGAYKIYVMATHGILSAEAPRLIEESSVDEVVVTNTVPHEVQKLQCPKIKTV
300 310 320 330 340 350
340 350 360
pF1KE3 DISMILSEAIRRIHNGESMSYLFRNIGLDD
:::.:::::::::::::::.:::::: .::
CCDS11 DISLILSEAIRRIHNGESMAYLFRNITVDD
360 370 380
>>CCDS58527.1 PRPSAP2 gene_id:5636|Hs108|chr17 (283 aa)
initn: 1831 init1: 1831 opt: 1831 Z-score: 2256.2 bits: 425.7 E(32554): 2.4e-119
Smith-Waterman score: 1831; 100.0% identity (100.0% similar) in 283 aa overlap (87-369:1-283)
60 70 80 90 100 110
pF1KE3 RETRVQIQESVRGKDVFIIQTVSKDVNTTIMELLIMVYACKTSCAKSIIGVIPYFPYSKQ
::::::::::::::::::::::::::::::
CCDS58 MELLIMVYACKTSCAKSIIGVIPYFPYSKQ
10 20 30
120 130 140 150 160 170
pF1KE3 CKMRKRGSIVSKLLASMMCKAGLTHLITMDLHQKEIQGFFNIPVDNLRASPFLLQYIQEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 CKMRKRGSIVSKLLASMMCKAGLTHLITMDLHQKEIQGFFNIPVDNLRASPFLLQYIQEE
40 50 60 70 80 90
180 190 200 210 220 230
pF1KE3 IPDYRNAVIVAKSPASAKRAQSFAERLRLGIAVIHGEAQDAESDLVDGRHSPPMVRSVAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 IPDYRNAVIVAKSPASAKRAQSFAERLRLGIAVIHGEAQDAESDLVDGRHSPPMVRSVAA
100 110 120 130 140 150
240 250 260 270 280 290
pF1KE3 IHPSLEIPMLIPKEKPPITVVGDVGGRIAIIVDDIIDDVDSFLAAAETLKERGAYKIFVM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 IHPSLEIPMLIPKEKPPITVVGDVGGRIAIIVDDIIDDVDSFLAAAETLKERGAYKIFVM
160 170 180 190 200 210
300 310 320 330 340 350
pF1KE3 ATHGLLSSDAPRRIEESAIDEVVVTNTIPHEVQKLQCPKIKTVDISMILSEAIRRIHNGE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 ATHGLLSSDAPRRIEESAIDEVVVTNTIPHEVQKLQCPKIKTVDISMILSEAIRRIHNGE
220 230 240 250 260 270
360
pF1KE3 SMSYLFRNIGLDD
:::::::::::::
CCDS58 SMSYLFRNIGLDD
280
>>CCDS58525.1 PRPSAP2 gene_id:5636|Hs108|chr17 (320 aa)
initn: 1735 init1: 1735 opt: 1735 Z-score: 2137.3 bits: 403.9 E(32554): 1e-112
Smith-Waterman score: 1962; 86.7% identity (86.7% similar) in 369 aa overlap (1-369:1-320)
10 20 30 40 50 60
pF1KE3 MFCVTPPELETKMNITKGGLVLFSANSNSSCMELSKKIAERLGVEMGKVQVYQEPNRETR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 MFCVTPPELETKMNITKGGLVLFSANSNSSCMELSKKIAERLGVEMGKVQVYQEPNRETR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 VQIQESVRGKDVFIIQTVSKDVNTTIMELLIMVYACKTSCAKSIIGVIPYFPYSKQCKMR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 VQIQESVRGKDVFIIQTVSKDVNTTIMELLIMVYACKTSCAKSIIGVIPYFPYSKQCKMR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 KRGSIVSKLLASMMCKAGLTHLITMDLHQKEIQGFFNIPVDNLRASPFLLQYIQEEIPDY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 KRGSIVSKLLASMMCKAGLTHLITMDLHQKEIQGFFNIPVDNLRASPFLLQYIQEEIPDY
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE3 RNAVIVAKSPASAKRAQSFAERLRLGIAVIHGEAQDAESDLVDGRHSPPMVRSVAAIHPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 RNAVIVAKSPASAKRAQSFAERLRLGIAVIHGEAQDAESDLVDGRHSPPMVRSVAAIHPS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE3 LEIPMLIPKEKPPITVVGDVGGRIAIIVDDIIDDVDSFLAAAETLKERGAYKIFVMATHG
::::::::::::::::::::::::::::
CCDS58 LEIPMLIPKEKPPITVVGDVGGRIAIIV--------------------------------
250 260
310 320 330 340 350 360
pF1KE3 LLSSDAPRRIEESAIDEVVVTNTIPHEVQKLQCPKIKTVDISMILSEAIRRIHNGESMSY
:::::::::::::::::::::::::::::::::::::::::::
CCDS58 -----------------VVVTNTIPHEVQKLQCPKIKTVDISMILSEAIRRIHNGESMSY
270 280 290 300 310
pF1KE3 LFRNIGLDD
:::::::::
CCDS58 LFRNIGLDD
320
>>CCDS82209.1 PRPSAP1 gene_id:5635|Hs108|chr17 (282 aa)
initn: 1556 init1: 814 opt: 1558 Z-score: 1920.5 bits: 363.6 E(32554): 1.2e-100
Smith-Waterman score: 1558; 83.0% identity (95.4% similar) in 283 aa overlap (87-369:1-282)
60 70 80 90 100 110
pF1KE3 RETRVQIQESVRGKDVFIIQTVSKDVNTTIMELLIMVYACKTSCAKSIIGVIPYFPYSKQ
::::::.:: ::.::..:::::::::::::
CCDS82 MELLIMAYALKTACARNIIGVIPYFPYSKQ
10 20 30
120 130 140 150 160 170
pF1KE3 CKMRKRGSIVSKLLASMMCKAGLTHLITMDLHQKEIQGFFNIPVDNLRASPFLLQYIQEE
::::::::: ::::::. ::::::.::::::::::::::..::::::::::::::::::
CCDS82 SKMRKRGSIVCKLLASMLAKAGLTHIITMDLHQKEIQGFFSFPVDNLRASPFLLQYIQEE
40 50 60 70 80 90
180 190 200 210 220 230
pF1KE3 IPDYRNAVIVAKSPASAKRAQSFAERLRLGIAVIHGEAQDAESDLVDGRHSPPMVRSVAA
::.::::::::::: .::::::.:::::::.:::::::: .: :. :::::::::.. :.
CCDS82 IPNYRNAVIVAKSPDAAKRAQSYAERLRLGLAVIHGEAQCTELDMDDGRHSPPMVKN-AT
100 110 120 130 140
240 250 260 270 280 290
pF1KE3 IHPSLEIPMLIPKEKPPITVVGDVGGRIAIIVDDIIDDVDSFLAAAETLKERGAYKIFVM
.::.::.:... :::::::::::::::::::::::::::.::.:::: :::::::::.::
CCDS82 VHPGLELPLMMAKEKPPITVVGDVGGRIAIIVDDIIDDVESFVAAAEILKERGAYKIYVM
150 160 170 180 190 200
300 310 320 330 340 350
pF1KE3 ATHGLLSSDAPRRIEESAIDEVVVTNTIPHEVQKLQCPKIKTVDISMILSEAIRRIHNGE
::::.::..::: ::::..::::::::.::::::::::::::::::.:::::::::::::
CCDS82 ATHGILSAEAPRLIEESSVDEVVVTNTVPHEVQKLQCPKIKTVDISLILSEAIRRIHNGE
210 220 230 240 250 260
360
pF1KE3 SMSYLFRNIGLDD
::.:::::: .::
CCDS82 SMAYLFRNITVDD
270 280
>>CCDS14150.1 PRPS2 gene_id:5634|Hs108|chrX (318 aa)
initn: 955 init1: 368 opt: 375 Z-score: 464.6 bits: 94.4 E(32554): 1.5e-19
Smith-Waterman score: 908; 44.7% identity (71.1% similar) in 349 aa overlap (20-367:4-318)
10 20 30 40 50 60
pF1KE3 MFCVTPPELETKMNITKGGLVLFSANSNSSCMELSKKIAERLGVEMGKVQVYQEPNRETR
.::::..:.. .::...:.:::.:.::: . . :.::
CCDS14 MPNIVLFSGSSHQ---DLSQRVADRLGLELGKVVTKKFSNQETS
10 20 30 40
70 80 90 100 110 120
pF1KE3 VQIQESVRGKDVFIIQTVSKDVNTTIMELLIMVYACKTSCAKSIIGVIPYFPYSKQCKMR
:.: :::::.::.:::. ..: ..::::::. ::: . .. . .::: :::..: :
CCDS14 VEIGESVRGEDVYIIQSGCGEINDNLMELLIMINACKIASSSRVTAVIPCFPYARQDKKD
50 60 70 80 90 100
130 140 150 160 170
pF1KE3 K-RGSIVSKLLASMMCKAGLTHLITMDLHQKEIQGFFNIPVDNLRASPFLLQYIQEEIPD
: :. : .::.:.:. :: :.:::::: ..:::::.:::::: : : .::.:.:.: .
CCDS14 KSRAPISAKLVANMLSVAGADHIITMDLHASQIQGFFDIPVDNLYAEPAVLQWIRENIAE
110 120 130 140 150 160
180 190 200 210 220 230
pF1KE3 YRNAVIVAKSPASAKRAQSFAERLRLGIAVIHGEAQDAESDLVDGRHSPPMVRSVAAIHP
..: .::. . ..:::. :.:.:: . .:.:: : . :.
CCDS14 WKNCIIVSPDAGGAKRVTSIADRLNVEFALIHKERKKAN---------------------
170 180 190 200
240 250 260 270 280 290
pF1KE3 SLEIPMLIPKEKPPITVVGDVGGRIAIIVDDIIDDVDSFLAAAETLKERGAYKIFVMATH
:. .. .:::: :.::.:::. : .. ::. : :: :.... ::
CCDS14 --EVDRMV--------LVGDVKDRVAILVDDMADTCGTICHAADKLLSAGATKVYAILTH
210 220 230 240 250
300 310 320 330 340 350
pF1KE3 GLLSSDAPRRIEESAIDEVVVTNTIPHEVQKLQCPKIKTVDISMILSEAIRRIHNGESMS
:..:. : ::...:.. ::::::::.: . .: ::...::::::.::::: :::::.:
CCDS14 GIFSGPAISRINNAAFEAVVVTNTIPQEDKMKHCTKIQVIDISMILAEAIRRTHNGESVS
260 270 280 290 300 310
360
pF1KE3 YLFRNIGLDD
::: .. :
CCDS14 YLFSHVPL
>>CCDS43918.1 PRPS2 gene_id:5634|Hs108|chrX (321 aa)
initn: 945 init1: 368 opt: 375 Z-score: 464.6 bits: 94.4 E(32554): 1.5e-19
Smith-Waterman score: 902; 44.3% identity (70.5% similar) in 352 aa overlap (20-367:4-321)
10 20 30 40 50 60
pF1KE3 MFCVTPPELETKMNITKGGLVLFSANSNSSCMELSKKIAERLGVEMGKVQVYQEPNRETR
.::::..:.. .::...:.:::.:.::: . . :.::
CCDS43 MPNIVLFSGSSHQ---DLSQRVADRLGLELGKVVTKKFSNQETS
10 20 30 40
70 80 90 100 110 120
pF1KE3 VQIQESVRGKDVFIIQTVSKDVNTTIMELLIMVYACKTSCAKSIIGVIPYFPYSKQCKMR
:.: :::::.::.:::. ..: ..::::::. ::: . .. . .::: :::..: :
CCDS43 VEIGESVRGEDVYIIQSGCGEINDNLMELLIMINACKIASSSRVTAVIPCFPYARQDKKD
50 60 70 80 90 100
130 140 150 160 170
pF1KE3 K----RGSIVSKLLASMMCKAGLTHLITMDLHQKEIQGFFNIPVDNLRASPFLLQYIQEE
: :. : .::.:.:. :: :.:::::: ..:::::.:::::: : : .::.:.:.
CCDS43 KVGESRAPISAKLVANMLSVAGADHIITMDLHASQIQGFFDIPVDNLYAEPAVLQWIREN
110 120 130 140 150 160
180 190 200 210 220 230
pF1KE3 IPDYRNAVIVAKSPASAKRAQSFAERLRLGIAVIHGEAQDAESDLVDGRHSPPMVRSVAA
: ...: .::. . ..:::. :.:.:: . .:.:: : . :.
CCDS43 IAEWKNCIIVSPDAGGAKRVTSIADRLNVEFALIHKERKKAN------------------
170 180 190 200
240 250 260 270 280 290
pF1KE3 IHPSLEIPMLIPKEKPPITVVGDVGGRIAIIVDDIIDDVDSFLAAAETLKERGAYKIFVM
:. .. .:::: :.::.:::. : .. ::. : :: :....
CCDS43 -----EVDRMV--------LVGDVKDRVAILVDDMADTCGTICHAADKLLSAGATKVYAI
210 220 230 240 250
300 310 320 330 340 350
pF1KE3 ATHGLLSSDAPRRIEESAIDEVVVTNTIPHEVQKLQCPKIKTVDISMILSEAIRRIHNGE
:::..:. : ::...:.. ::::::::.: . .: ::...::::::.::::: ::::
CCDS43 LTHGIFSGPAISRINNAAFEAVVVTNTIPQEDKMKHCTKIQVIDISMILAEAIRRTHNGE
260 270 280 290 300 310
360
pF1KE3 SMSYLFRNIGLDD
:.:::: .. :
CCDS43 SVSYLFSHVPL
320
>>CCDS76007.1 PRPS1 gene_id:5631|Hs108|chrX (114 aa)
initn: 374 init1: 359 opt: 362 Z-score: 455.8 bits: 91.3 E(32554): 4.5e-19
Smith-Waterman score: 362; 49.1% identity (77.2% similar) in 114 aa overlap (254-367:1-114)
230 240 250 260 270 280
pF1KE3 GRHSPPMVRSVAAIHPSLEIPMLIPKEKPPITVVGDVGGRIAIIVDDIIDDVDSFLAAAE
...:::: :.::.:::. : .. ::.
CCDS76 MVLVGDVKDRVAILVDDMADTCGTICHAAD
10 20 30
290 300 310 320 330 340
pF1KE3 TLKERGAYKIFVMATHGLLSSDAPRRIEESAIDEVVVTNTIPHEVQKLQCPKIKTVDISM
: :: ..... :::..:. : ::... .. ::::::::.: . .: ::...::::
CCDS76 KLLSAGATRVYAILTHGIFSGPAISRINNACFEAVVVTNTIPQEDKMKHCSKIQVIDISM
40 50 60 70 80 90
350 360
pF1KE3 ILSEAIRRIHNGESMSYLFRNIGLDD
::.::::: :::::.:::: .. :
CCDS76 ILAEAIRRTHNGESVSYLFSHVPL
100 110
>>CCDS47552.1 PRPS1L1 gene_id:221823|Hs108|chr7 (318 aa)
initn: 957 init1: 355 opt: 366 Z-score: 453.6 bits: 92.3 E(32554): 6.1e-19
Smith-Waterman score: 902; 45.0% identity (71.3% similar) in 342 aa overlap (27-367:8-318)
10 20 30 40 50 60
pF1KE3 MFCVTPPELETKMNITKGGLVLFSANSNSSCMELSKKIAERLGVEMGKVQVYQEPNRETR
:.:: ..::.:::.:::.:.::: . . :.::
CCDS47 MPNIKIFSGSSHQDLSQKIADRLGLELGKVVTKKFSNQETC
10 20 30 40
70 80 90 100 110 120
pF1KE3 VQIQESVRGKDVFIIQTVSKDVNTTIMELLIMVYACKTSCAKSIIGVIPYFPYSKQCKMR
:.:.:::::.::.:.:. ..: ..::::::. ::: . :. . .::: :::..: :
CCDS47 VEIDESVRGEDVYIVQSGCGEINDSLMELLIMINACKIASASRVTAVIPCFPYARQDKKD
50 60 70 80 90 100
130 140 150 160 170
pF1KE3 K-RGSIVSKLLASMMCKAGLTHLITMDLHQKEIQGFFNIPVDNLRASPFLLQYIQEEIPD
: :. : .::.:.:. :: :.:::::: ..:::::.:::::: : : .:..:.:.::.
CCDS47 KSRSPISAKLVANMLSIAGADHIITMDLHASQIQGFFDIPVDNLYAEPTVLKWIRENIPE
110 120 130 140 150 160
180 190 200 210 220 230
pF1KE3 YRNAVIVAKSPASAKRAQSFAERLRLGIAVIHGEAQDAESDLVDGRHSPPMVRSVAAIHP
..: .::. . ..:::. :.:..: . .:.:: : . : . ::
CCDS47 WKNCIIVSPDAGGAKRVTSIADQLNVDFALIHKERKKA--NEVDC---------------
170 180 190 200
240 250 260 270 280 290
pF1KE3 SLEIPMLIPKEKPPITVVGDVGGRIAIIVDDIIDDVDSFLAAAETLKERGAYKIFVMATH
:..::::. :.::.:::. : .. ::. : :: ..... ::
CCDS47 --------------IVLVGDVNDRVAILVDDMADTCVTICLAADKLLSAGATRVYAILTH
210 220 230 240 250
300 310 320 330 340 350
pF1KE3 GLLSSDAPRRIEESAIDEVVVTNTIPHEVQKLQCPKIKTVDISMILSEAIRRIHNGESMS
:..:. : ::. . .. ::::::::.. . .: ::...::::::.::::: :::::.:
CCDS47 GIFSGPAISRINTACFEAVVVTNTIPQDEKMKHCSKIRVIDISMILAEAIRRTHNGESVS
260 270 280 290 300 310
360
pF1KE3 YLFRNIGLDD
::: .. :
CCDS47 YLFSHVPL
369 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 13:54:07 2016 done: Sun Nov 6 13:54:08 2016
Total Scan time: 2.640 Total Display time: 0.040
Function used was FASTA [36.3.4 Apr, 2011]