FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE4335, 345 aa 1>>>pF1KE4335 345 - 345 aa - 345 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 9.1649+/-0.000432; mu= 0.2204+/- 0.027 mean_var=297.7069+/-62.614, 0's: 0 Z-trim(121.3): 25 B-trim: 1936 in 2/54 Lambda= 0.074333 statistics sampled from 37675 (37701) to 37675 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.77), E-opt: 0.2 (0.442), width: 16 Scan time: 9.730 The best scores are: opt bits E(85289) NP_110435 (OMIM: 607538) nuclear distribution prot ( 345) 2207 249.8 6.5e-66 XP_016880674 (OMIM: 607538) PREDICTED: nuclear dis ( 345) 2207 249.8 6.5e-66 XP_016880673 (OMIM: 607538) PREDICTED: nuclear dis ( 358) 2207 249.8 6.7e-66 XP_016880676 (OMIM: 607538) PREDICTED: nuclear dis ( 328) 2004 228.0 2.3e-59 NP_001020750 (OMIM: 607538) nuclear distribution p ( 328) 2004 228.0 2.3e-59 XP_016880675 (OMIM: 607538) PREDICTED: nuclear dis ( 341) 2004 228.0 2.3e-59 XP_016880672 (OMIM: 607538) PREDICTED: nuclear dis ( 390) 2005 228.2 2.4e-59 NP_001317058 (OMIM: 607538) nuclear distribution p ( 269) 1665 191.5 1.7e-48 XP_016880677 (OMIM: 607538) PREDICTED: nuclear dis ( 282) 1665 191.6 1.8e-48 XP_016878838 (OMIM: 605013,609449,614019) PREDICTE ( 346) 1167 138.3 2.4e-32 XP_016878845 (OMIM: 605013,609449,614019) PREDICTE ( 346) 1167 138.3 2.4e-32 XP_011520855 (OMIM: 605013,609449,614019) PREDICTE ( 347) 1153 136.8 6.9e-32 XP_005255453 (OMIM: 605013,609449,614019) PREDICTE ( 347) 1153 136.8 6.9e-32 XP_006720963 (OMIM: 605013,609449,614019) PREDICTE ( 347) 1153 136.8 6.9e-32 XP_006720960 (OMIM: 605013,609449,614019) PREDICTE ( 379) 1153 136.8 7.4e-32 XP_016878842 (OMIM: 605013,609449,614019) PREDICTE ( 319) 1135 134.8 2.5e-31 XP_016878839 (OMIM: 605013,609449,614019) PREDICTE ( 346) 1135 134.8 2.6e-31 NP_001137451 (OMIM: 605013,609449,614019) nuclear ( 335) 1133 134.6 3e-31 NP_060138 (OMIM: 605013,609449,614019) nuclear dis ( 335) 1133 134.6 3e-31 XP_016878844 (OMIM: 605013,609449,614019) PREDICTE ( 301) 1059 126.6 6.8e-29 XP_016878843 (OMIM: 605013,609449,614019) PREDICTE ( 319) 1049 125.6 1.5e-28 XP_016878840 (OMIM: 605013,609449,614019) PREDICTE ( 339) 1046 125.3 1.9e-28 XP_016878841 (OMIM: 605013,609449,614019) PREDICTE ( 339) 1046 125.3 1.9e-28 XP_016878846 (OMIM: 605013,609449,614019) PREDICTE ( 215) 618 79.2 9.4e-15 >>NP_110435 (OMIM: 607538) nuclear distribution protein (345 aa) initn: 2207 init1: 2207 opt: 2207 Z-score: 1304.3 bits: 249.8 E(85289): 6.5e-66 Smith-Waterman score: 2207; 99.7% identity (99.7% similar) in 345 aa overlap (1-345:1-345) 10 20 30 40 50 60 pF1KE4 MDGEDIPDFSSLKEETAYWKELSLKYKQSFQEARDELVEFQEGSRELEAELEAQLVQAEQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_110 MDGEDIPDFSSLKEETAYWKELSLKYKQSFQEARDELVEFQEGSRELEAELEAQLVQAEQ 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 RNRDLQADNQRLKYEVEALKEKLEHQYAQSYKQVSVLEDDLSQTRAIKEQLHKYVRELEQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_110 RNRDLQADNQRLKYEVEALKEKLEHQYAQSYKQVSVLEDDLSQTRAIKEQLHKYVRELEQ 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 ANDDLERAKRATIVSLEDFEQRLNQAIERNAFLESELDEKESLLVSVQRLKDEARDLRQE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_110 ANDDLERAKRATIVSLEDFEQRLNQAIERNAFLESELDEKESLLVSVQRLKDEARDLRQE 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE4 LAVRERQQEVTRKSAPSSPTLDCEKMDSAVQASLSLPATPVGKGTENTFPSPKAIPNGFG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_110 LAVRERQQEVTRKSAPSSPTLDCEKMDSAVQASLSLPATPVGKGTENTFPSPKAIPNGFG 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE4 TSPLTPSARISALNIVGDLLRKVGALESKLAACRNFAKDQASRKSYISGNVNCGVLNGNG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_110 TSPLTPSARISALNIVGDLLRKVGALESKLAACRNFAKDQASRKSYISGNVNCGVLNGNG 250 260 270 280 290 300 310 320 330 340 pF1KE4 TKFSRSGHTSFFDKGAVNGFDTAPPPPGLGSSRPSSAPGMLPLSV ::::::::::::::::::::: ::::::::::::::::::::::: NP_110 TKFSRSGHTSFFDKGAVNGFDPAPPPPGLGSSRPSSAPGMLPLSV 310 320 330 340 >>XP_016880674 (OMIM: 607538) PREDICTED: nuclear distrib (345 aa) initn: 2207 init1: 2207 opt: 2207 Z-score: 1304.3 bits: 249.8 E(85289): 6.5e-66 Smith-Waterman score: 2207; 99.7% identity (99.7% similar) in 345 aa overlap (1-345:1-345) 10 20 30 40 50 60 pF1KE4 MDGEDIPDFSSLKEETAYWKELSLKYKQSFQEARDELVEFQEGSRELEAELEAQLVQAEQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 MDGEDIPDFSSLKEETAYWKELSLKYKQSFQEARDELVEFQEGSRELEAELEAQLVQAEQ 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 RNRDLQADNQRLKYEVEALKEKLEHQYAQSYKQVSVLEDDLSQTRAIKEQLHKYVRELEQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 RNRDLQADNQRLKYEVEALKEKLEHQYAQSYKQVSVLEDDLSQTRAIKEQLHKYVRELEQ 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 ANDDLERAKRATIVSLEDFEQRLNQAIERNAFLESELDEKESLLVSVQRLKDEARDLRQE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 ANDDLERAKRATIVSLEDFEQRLNQAIERNAFLESELDEKESLLVSVQRLKDEARDLRQE 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE4 LAVRERQQEVTRKSAPSSPTLDCEKMDSAVQASLSLPATPVGKGTENTFPSPKAIPNGFG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 LAVRERQQEVTRKSAPSSPTLDCEKMDSAVQASLSLPATPVGKGTENTFPSPKAIPNGFG 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE4 TSPLTPSARISALNIVGDLLRKVGALESKLAACRNFAKDQASRKSYISGNVNCGVLNGNG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 TSPLTPSARISALNIVGDLLRKVGALESKLAACRNFAKDQASRKSYISGNVNCGVLNGNG 250 260 270 280 290 300 310 320 330 340 pF1KE4 TKFSRSGHTSFFDKGAVNGFDTAPPPPGLGSSRPSSAPGMLPLSV ::::::::::::::::::::: ::::::::::::::::::::::: XP_016 TKFSRSGHTSFFDKGAVNGFDPAPPPPGLGSSRPSSAPGMLPLSV 310 320 330 340 >>XP_016880673 (OMIM: 607538) PREDICTED: nuclear distrib (358 aa) initn: 2207 init1: 2207 opt: 2207 Z-score: 1304.1 bits: 249.8 E(85289): 6.7e-66 Smith-Waterman score: 2207; 99.7% identity (99.7% similar) in 345 aa overlap (1-345:14-358) 10 20 30 40 pF1KE4 MDGEDIPDFSSLKEETAYWKELSLKYKQSFQEARDELVEFQEGSREL ::::::::::::::::::::::::::::::::::::::::::::::: XP_016 MFYSLQNAAAFLIMDGEDIPDFSSLKEETAYWKELSLKYKQSFQEARDELVEFQEGSREL 10 20 30 40 50 60 50 60 70 80 90 100 pF1KE4 EAELEAQLVQAEQRNRDLQADNQRLKYEVEALKEKLEHQYAQSYKQVSVLEDDLSQTRAI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 EAELEAQLVQAEQRNRDLQADNQRLKYEVEALKEKLEHQYAQSYKQVSVLEDDLSQTRAI 70 80 90 100 110 120 110 120 130 140 150 160 pF1KE4 KEQLHKYVRELEQANDDLERAKRATIVSLEDFEQRLNQAIERNAFLESELDEKESLLVSV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 KEQLHKYVRELEQANDDLERAKRATIVSLEDFEQRLNQAIERNAFLESELDEKESLLVSV 130 140 150 160 170 180 170 180 190 200 210 220 pF1KE4 QRLKDEARDLRQELAVRERQQEVTRKSAPSSPTLDCEKMDSAVQASLSLPATPVGKGTEN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 QRLKDEARDLRQELAVRERQQEVTRKSAPSSPTLDCEKMDSAVQASLSLPATPVGKGTEN 190 200 210 220 230 240 230 240 250 260 270 280 pF1KE4 TFPSPKAIPNGFGTSPLTPSARISALNIVGDLLRKVGALESKLAACRNFAKDQASRKSYI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 TFPSPKAIPNGFGTSPLTPSARISALNIVGDLLRKVGALESKLAACRNFAKDQASRKSYI 250 260 270 280 290 300 290 300 310 320 330 340 pF1KE4 SGNVNCGVLNGNGTKFSRSGHTSFFDKGAVNGFDTAPPPPGLGSSRPSSAPGMLPLSV :::::::::::::::::::::::::::::::::: ::::::::::::::::::::::: XP_016 SGNVNCGVLNGNGTKFSRSGHTSFFDKGAVNGFDPAPPPPGLGSSRPSSAPGMLPLSV 310 320 330 340 350 >>XP_016880676 (OMIM: 607538) PREDICTED: nuclear distrib (328 aa) initn: 2004 init1: 2004 opt: 2004 Z-score: 1186.9 bits: 228.0 E(85289): 2.3e-59 Smith-Waterman score: 2004; 100.0% identity (100.0% similar) in 315 aa overlap (1-315:1-315) 10 20 30 40 50 60 pF1KE4 MDGEDIPDFSSLKEETAYWKELSLKYKQSFQEARDELVEFQEGSRELEAELEAQLVQAEQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 MDGEDIPDFSSLKEETAYWKELSLKYKQSFQEARDELVEFQEGSRELEAELEAQLVQAEQ 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 RNRDLQADNQRLKYEVEALKEKLEHQYAQSYKQVSVLEDDLSQTRAIKEQLHKYVRELEQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 RNRDLQADNQRLKYEVEALKEKLEHQYAQSYKQVSVLEDDLSQTRAIKEQLHKYVRELEQ 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 ANDDLERAKRATIVSLEDFEQRLNQAIERNAFLESELDEKESLLVSVQRLKDEARDLRQE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 ANDDLERAKRATIVSLEDFEQRLNQAIERNAFLESELDEKESLLVSVQRLKDEARDLRQE 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE4 LAVRERQQEVTRKSAPSSPTLDCEKMDSAVQASLSLPATPVGKGTENTFPSPKAIPNGFG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 LAVRERQQEVTRKSAPSSPTLDCEKMDSAVQASLSLPATPVGKGTENTFPSPKAIPNGFG 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE4 TSPLTPSARISALNIVGDLLRKVGALESKLAACRNFAKDQASRKSYISGNVNCGVLNGNG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 TSPLTPSARISALNIVGDLLRKVGALESKLAACRNFAKDQASRKSYISGNVNCGVLNGNG 250 260 270 280 290 300 310 320 330 340 pF1KE4 TKFSRSGHTSFFDKGAVNGFDTAPPPPGLGSSRPSSAPGMLPLSV ::::::::::::::: XP_016 TKFSRSGHTSFFDKGQEKVIFPTLFMGQ 310 320 >>NP_001020750 (OMIM: 607538) nuclear distribution prote (328 aa) initn: 2004 init1: 2004 opt: 2004 Z-score: 1186.9 bits: 228.0 E(85289): 2.3e-59 Smith-Waterman score: 2004; 100.0% identity (100.0% similar) in 315 aa overlap (1-315:1-315) 10 20 30 40 50 60 pF1KE4 MDGEDIPDFSSLKEETAYWKELSLKYKQSFQEARDELVEFQEGSRELEAELEAQLVQAEQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MDGEDIPDFSSLKEETAYWKELSLKYKQSFQEARDELVEFQEGSRELEAELEAQLVQAEQ 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 RNRDLQADNQRLKYEVEALKEKLEHQYAQSYKQVSVLEDDLSQTRAIKEQLHKYVRELEQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 RNRDLQADNQRLKYEVEALKEKLEHQYAQSYKQVSVLEDDLSQTRAIKEQLHKYVRELEQ 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 ANDDLERAKRATIVSLEDFEQRLNQAIERNAFLESELDEKESLLVSVQRLKDEARDLRQE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 ANDDLERAKRATIVSLEDFEQRLNQAIERNAFLESELDEKESLLVSVQRLKDEARDLRQE 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE4 LAVRERQQEVTRKSAPSSPTLDCEKMDSAVQASLSLPATPVGKGTENTFPSPKAIPNGFG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 LAVRERQQEVTRKSAPSSPTLDCEKMDSAVQASLSLPATPVGKGTENTFPSPKAIPNGFG 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE4 TSPLTPSARISALNIVGDLLRKVGALESKLAACRNFAKDQASRKSYISGNVNCGVLNGNG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 TSPLTPSARISALNIVGDLLRKVGALESKLAACRNFAKDQASRKSYISGNVNCGVLNGNG 250 260 270 280 290 300 310 320 330 340 pF1KE4 TKFSRSGHTSFFDKGAVNGFDTAPPPPGLGSSRPSSAPGMLPLSV ::::::::::::::: NP_001 TKFSRSGHTSFFDKGQEKVIFPTLFMGQ 310 320 >>XP_016880675 (OMIM: 607538) PREDICTED: nuclear distrib (341 aa) initn: 2004 init1: 2004 opt: 2004 Z-score: 1186.7 bits: 228.0 E(85289): 2.3e-59 Smith-Waterman score: 2004; 100.0% identity (100.0% similar) in 315 aa overlap (1-315:14-328) 10 20 30 40 pF1KE4 MDGEDIPDFSSLKEETAYWKELSLKYKQSFQEARDELVEFQEGSREL ::::::::::::::::::::::::::::::::::::::::::::::: XP_016 MFYSLQNAAAFLIMDGEDIPDFSSLKEETAYWKELSLKYKQSFQEARDELVEFQEGSREL 10 20 30 40 50 60 50 60 70 80 90 100 pF1KE4 EAELEAQLVQAEQRNRDLQADNQRLKYEVEALKEKLEHQYAQSYKQVSVLEDDLSQTRAI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 EAELEAQLVQAEQRNRDLQADNQRLKYEVEALKEKLEHQYAQSYKQVSVLEDDLSQTRAI 70 80 90 100 110 120 110 120 130 140 150 160 pF1KE4 KEQLHKYVRELEQANDDLERAKRATIVSLEDFEQRLNQAIERNAFLESELDEKESLLVSV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 KEQLHKYVRELEQANDDLERAKRATIVSLEDFEQRLNQAIERNAFLESELDEKESLLVSV 130 140 150 160 170 180 170 180 190 200 210 220 pF1KE4 QRLKDEARDLRQELAVRERQQEVTRKSAPSSPTLDCEKMDSAVQASLSLPATPVGKGTEN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 QRLKDEARDLRQELAVRERQQEVTRKSAPSSPTLDCEKMDSAVQASLSLPATPVGKGTEN 190 200 210 220 230 240 230 240 250 260 270 280 pF1KE4 TFPSPKAIPNGFGTSPLTPSARISALNIVGDLLRKVGALESKLAACRNFAKDQASRKSYI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 TFPSPKAIPNGFGTSPLTPSARISALNIVGDLLRKVGALESKLAACRNFAKDQASRKSYI 250 260 270 280 290 300 290 300 310 320 330 340 pF1KE4 SGNVNCGVLNGNGTKFSRSGHTSFFDKGAVNGFDTAPPPPGLGSSRPSSAPGMLPLSV :::::::::::::::::::::::::::: XP_016 SGNVNCGVLNGNGTKFSRSGHTSFFDKGQEKVIFPTLFMGQ 310 320 330 340 >>XP_016880672 (OMIM: 607538) PREDICTED: nuclear distrib (390 aa) initn: 2049 init1: 2005 opt: 2005 Z-score: 1186.6 bits: 228.2 E(85289): 2.4e-59 Smith-Waterman score: 2005; 99.7% identity (100.0% similar) in 316 aa overlap (1-316:14-329) 10 20 30 40 pF1KE4 MDGEDIPDFSSLKEETAYWKELSLKYKQSFQEARDELVEFQEGSREL ::::::::::::::::::::::::::::::::::::::::::::::: XP_016 MFYSLQNAAAFLIMDGEDIPDFSSLKEETAYWKELSLKYKQSFQEARDELVEFQEGSREL 10 20 30 40 50 60 50 60 70 80 90 100 pF1KE4 EAELEAQLVQAEQRNRDLQADNQRLKYEVEALKEKLEHQYAQSYKQVSVLEDDLSQTRAI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 EAELEAQLVQAEQRNRDLQADNQRLKYEVEALKEKLEHQYAQSYKQVSVLEDDLSQTRAI 70 80 90 100 110 120 110 120 130 140 150 160 pF1KE4 KEQLHKYVRELEQANDDLERAKRATIVSLEDFEQRLNQAIERNAFLESELDEKESLLVSV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 KEQLHKYVRELEQANDDLERAKRATIVSLEDFEQRLNQAIERNAFLESELDEKESLLVSV 130 140 150 160 170 180 170 180 190 200 210 220 pF1KE4 QRLKDEARDLRQELAVRERQQEVTRKSAPSSPTLDCEKMDSAVQASLSLPATPVGKGTEN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 QRLKDEARDLRQELAVRERQQEVTRKSAPSSPTLDCEKMDSAVQASLSLPATPVGKGTEN 190 200 210 220 230 240 230 240 250 260 270 280 pF1KE4 TFPSPKAIPNGFGTSPLTPSARISALNIVGDLLRKVGALESKLAACRNFAKDQASRKSYI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 TFPSPKAIPNGFGTSPLTPSARISALNIVGDLLRKVGALESKLAACRNFAKDQASRKSYI 250 260 270 280 290 300 290 300 310 320 330 340 pF1KE4 SGNVNCGVLNGNGTKFSRSGHTSFFDKGAVNGFDTAPPPPGLGSSRPSSAPGMLPLSV ::::::::::::::::::::::::::::. XP_016 SGNVNCGVLNGNGTKFSRSGHTSFFDKGSRAMTPSQLRLLTVIVRYRRCGPREAGGALAP 310 320 330 340 350 360 >>NP_001317058 (OMIM: 607538) nuclear distribution prote (269 aa) initn: 1665 init1: 1665 opt: 1665 Z-score: 991.5 bits: 191.5 E(85289): 1.7e-48 Smith-Waterman score: 1665; 100.0% identity (100.0% similar) in 264 aa overlap (1-264:1-264) 10 20 30 40 50 60 pF1KE4 MDGEDIPDFSSLKEETAYWKELSLKYKQSFQEARDELVEFQEGSRELEAELEAQLVQAEQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MDGEDIPDFSSLKEETAYWKELSLKYKQSFQEARDELVEFQEGSRELEAELEAQLVQAEQ 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 RNRDLQADNQRLKYEVEALKEKLEHQYAQSYKQVSVLEDDLSQTRAIKEQLHKYVRELEQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 RNRDLQADNQRLKYEVEALKEKLEHQYAQSYKQVSVLEDDLSQTRAIKEQLHKYVRELEQ 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 ANDDLERAKRATIVSLEDFEQRLNQAIERNAFLESELDEKESLLVSVQRLKDEARDLRQE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 ANDDLERAKRATIVSLEDFEQRLNQAIERNAFLESELDEKESLLVSVQRLKDEARDLRQE 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE4 LAVRERQQEVTRKSAPSSPTLDCEKMDSAVQASLSLPATPVGKGTENTFPSPKAIPNGFG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 LAVRERQQEVTRKSAPSSPTLDCEKMDSAVQASLSLPATPVGKGTENTFPSPKAIPNGFG 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE4 TSPLTPSARISALNIVGDLLRKVGALESKLAACRNFAKDQASRKSYISGNVNCGVLNGNG :::::::::::::::::::::::: NP_001 TSPLTPSARISALNIVGDLLRKVGGSKRL 250 260 >>XP_016880677 (OMIM: 607538) PREDICTED: nuclear distrib (282 aa) initn: 1665 init1: 1665 opt: 1665 Z-score: 991.3 bits: 191.6 E(85289): 1.8e-48 Smith-Waterman score: 1665; 100.0% identity (100.0% similar) in 264 aa overlap (1-264:14-277) 10 20 30 40 pF1KE4 MDGEDIPDFSSLKEETAYWKELSLKYKQSFQEARDELVEFQEGSREL ::::::::::::::::::::::::::::::::::::::::::::::: XP_016 MFYSLQNAAAFLIMDGEDIPDFSSLKEETAYWKELSLKYKQSFQEARDELVEFQEGSREL 10 20 30 40 50 60 50 60 70 80 90 100 pF1KE4 EAELEAQLVQAEQRNRDLQADNQRLKYEVEALKEKLEHQYAQSYKQVSVLEDDLSQTRAI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 EAELEAQLVQAEQRNRDLQADNQRLKYEVEALKEKLEHQYAQSYKQVSVLEDDLSQTRAI 70 80 90 100 110 120 110 120 130 140 150 160 pF1KE4 KEQLHKYVRELEQANDDLERAKRATIVSLEDFEQRLNQAIERNAFLESELDEKESLLVSV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 KEQLHKYVRELEQANDDLERAKRATIVSLEDFEQRLNQAIERNAFLESELDEKESLLVSV 130 140 150 160 170 180 170 180 190 200 210 220 pF1KE4 QRLKDEARDLRQELAVRERQQEVTRKSAPSSPTLDCEKMDSAVQASLSLPATPVGKGTEN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 QRLKDEARDLRQELAVRERQQEVTRKSAPSSPTLDCEKMDSAVQASLSLPATPVGKGTEN 190 200 210 220 230 240 230 240 250 260 270 280 pF1KE4 TFPSPKAIPNGFGTSPLTPSARISALNIVGDLLRKVGALESKLAACRNFAKDQASRKSYI ::::::::::::::::::::::::::::::::::::: XP_016 TFPSPKAIPNGFGTSPLTPSARISALNIVGDLLRKVGGSKRL 250 260 270 280 290 300 310 320 330 340 pF1KE4 SGNVNCGVLNGNGTKFSRSGHTSFFDKGAVNGFDTAPPPPGLGSSRPSSAPGMLPLSV >>XP_016878838 (OMIM: 605013,609449,614019) PREDICTED: n (346 aa) initn: 1182 init1: 836 opt: 1167 Z-score: 701.5 bits: 138.3 E(85289): 2.4e-32 Smith-Waterman score: 1167; 57.1% identity (79.3% similar) in 343 aa overlap (9-343:8-344) 10 20 30 40 50 60 pF1KE4 MDGEDIPDFSSLKEETAYWKELSLKYKQSFQEARDELVEFQEGSRELEAELEAQLVQAEQ ::: .::. :::.:.. ::: .....:: :::::::: :::::.:: : : XP_016 MEDSGKTFSSEEEEANYWKDLAMTYKQRAENTQEELREFQEGSREYEAELETQLQQIET 10 20 30 40 50 70 80 90 100 110 120 pF1KE4 RNRDLQADNQRLKYEVEALKEKLEHQYAQSYKQVSVLEDDLSQTRAIKEQLHKYVRELEQ ::::: ..:.::..:.:..:::.: :....:.:.:.:::::.::.:::.::.::.::::: XP_016 RNRDLLSENNRLRMELETIKEKFEVQHSEGYRQISALEDDLAQTKAIKDQLQKYIRELEQ 60 70 80 90 100 110 130 140 150 160 170 180 pF1KE4 ANDDLERAKRATIVSLEDFEQRLNQAIERNAFLESELDEKESLLVSVQRLKDEARDLRQE :::::::::::::.:::::::::::::::::::::::::::.:: ::::::::::::::: XP_016 ANDDLERAKRATIMSLEDFEQRLNQAIERNAFLESELDEKENLLESVQRLKDEARDLRQE 120 130 140 150 160 170 190 200 210 220 230 pF1KE4 LAVRERQQEVTRKSAPSSPTLDCEKMDSAVQASLSLPATPVG-KGTENTFPSPKAIPNGF :::...: : : ::: .. :. :.::::. :.:.::.. .: ... .: .. :. XP_016 LAVQQKQ-EKPRTPMPSS--VEAERTDTAVQATGSVPSTPIAHRGPSSSLNTPGSFRRGL 180 190 200 210 220 230 240 250 260 270 280 290 pF1KE4 ----GTSPLTPSARISALNIVGDLLRKVGALESKLAACRNFAKDQASRKSYISGNVNCGV : .::::.::::::::::::::::::::::::.:::.. ::. .. :. : XP_016 DDSTGGTPLTPAARISALNIVGDLLRKVGALESKLASCRNLVYDQSPNRT---GGPASGR 240 250 260 270 280 290 300 310 320 330 340 pF1KE4 LNGN---GTKFSRSGHTSFFDKGAVNGFDTAPPPPGLGSSRPSSAPGMLPLSV . : : . : . . ::: . .. . :: ..:: :: :.. . XP_016 SSKNRDGGERRPSSTSVPLGDKGLGKRLEFGKPPSHMSSSPLPSAQGVVKMLL 300 310 320 330 340 345 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 02:13:52 2016 done: Sun Nov 6 02:13:53 2016 Total Scan time: 9.730 Total Display time: 0.030 Function used was FASTA [36.3.4 Apr, 2011]