FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE5682, 548 aa 1>>>pF1KE5682 548 - 548 aa - 548 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 10.2722+/-0.000357; mu= -4.6527+/- 0.022 mean_var=238.7505+/-48.811, 0's: 0 Z-trim(121.6): 45 B-trim: 38 in 1/56 Lambda= 0.083005 statistics sampled from 38425 (38489) to 38425 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.78), E-opt: 0.2 (0.451), width: 16 Scan time: 10.120 The best scores are: opt bits E(85289) NP_060551 (OMIM: 612661,613988) telomerase Cajal b ( 548) 3843 473.2 9.3e-133 NP_001137462 (OMIM: 612661,613988) telomerase Caja ( 548) 3843 473.2 9.3e-133 NP_001137463 (OMIM: 612661,613988) telomerase Caja ( 548) 3843 473.2 9.3e-133 NP_001137464 (OMIM: 612661,613988) telomerase Caja ( 548) 3843 473.2 9.3e-133 XP_011522254 (OMIM: 612661,613988) PREDICTED: telo ( 335) 2368 296.4 9.1e-80 >>NP_060551 (OMIM: 612661,613988) telomerase Cajal body (548 aa) initn: 3843 init1: 3843 opt: 3843 Z-score: 2504.4 bits: 473.2 E(85289): 9.3e-133 Smith-Waterman score: 3843; 100.0% identity (100.0% similar) in 548 aa overlap (1-548:1-548) 10 20 30 40 50 60 pF1KE5 MKTLETQPLAPDCCPSDQDPAPAHPSPHASPMNKNADSELMPPPPERGDPPRLSPDPVAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_060 MKTLETQPLAPDCCPSDQDPAPAHPSPHASPMNKNADSELMPPPPERGDPPRLSPDPVAG 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 SAVSQELREGDPVSLSTPLETEFGSPSELSPRIEEQELSENTSLPAEEANGSLSEEEANG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_060 SAVSQELREGDPVSLSTPLETEFGSPSELSPRIEEQELSENTSLPAEEANGSLSEEEANG 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE5 PELGSGKAMEDTSGEPAAEDEGDTAWNYSFSQLPRFLSGSWSEFSTQPENFLKGCKWAPD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_060 PELGSGKAMEDTSGEPAAEDEGDTAWNYSFSQLPRFLSGSWSEFSTQPENFLKGCKWAPD 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE5 GSCILTNSADNILRIYNLPPELYHEGEQVEYAEMVPVLRMVEGDTIYDYCWYSLMSSAQP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_060 GSCILTNSADNILRIYNLPPELYHEGEQVEYAEMVPVLRMVEGDTIYDYCWYSLMSSAQP 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE5 DTSYVASSSRENPIHIWDAFTGELRASFRAYNHLDELTAAHSLCFSPDGSQLFCGFNRTV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_060 DTSYVASSSRENPIHIWDAFTGELRASFRAYNHLDELTAAHSLCFSPDGSQLFCGFNRTV 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE5 RVFSTARPGRDCEVRATFAKKQGQSGIISCIAFSPAQPLYACGSYGRSLGLYAWDDGSPL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_060 RVFSTARPGRDCEVRATFAKKQGQSGIISCIAFSPAQPLYACGSYGRSLGLYAWDDGSPL 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE5 ALLGGHQGGITHLCFHPDGNRFFSGARKDAELLCWDLRQSGYPLWSLGREVTTNQRIYFD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_060 ALLGGHQGGITHLCFHPDGNRFFSGARKDAELLCWDLRQSGYPLWSLGREVTTNQRIYFD 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE5 LDPTGQFLVSGSTSGAVSVWDTDGPGNDGKPEPVLSFLPQKDCTNGVSLHPSLPLLATAS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_060 LDPTGQFLVSGSTSGAVSVWDTDGPGNDGKPEPVLSFLPQKDCTNGVSLHPSLPLLATAS 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE5 GQRVFPEPTESGDEGEELGLPLLSTRHVHLECRLQLWWCGGAPDSSIPDDHQGEKGQGGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_060 GQRVFPEPTESGDEGEELGLPLLSTRHVHLECRLQLWWCGGAPDSSIPDDHQGEKGQGGT 490 500 510 520 530 540 pF1KE5 EGGVGELI :::::::: NP_060 EGGVGELI >>NP_001137462 (OMIM: 612661,613988) telomerase Cajal bo (548 aa) initn: 3843 init1: 3843 opt: 3843 Z-score: 2504.4 bits: 473.2 E(85289): 9.3e-133 Smith-Waterman score: 3843; 100.0% identity (100.0% similar) in 548 aa overlap (1-548:1-548) 10 20 30 40 50 60 pF1KE5 MKTLETQPLAPDCCPSDQDPAPAHPSPHASPMNKNADSELMPPPPERGDPPRLSPDPVAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MKTLETQPLAPDCCPSDQDPAPAHPSPHASPMNKNADSELMPPPPERGDPPRLSPDPVAG 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 SAVSQELREGDPVSLSTPLETEFGSPSELSPRIEEQELSENTSLPAEEANGSLSEEEANG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 SAVSQELREGDPVSLSTPLETEFGSPSELSPRIEEQELSENTSLPAEEANGSLSEEEANG 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE5 PELGSGKAMEDTSGEPAAEDEGDTAWNYSFSQLPRFLSGSWSEFSTQPENFLKGCKWAPD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 PELGSGKAMEDTSGEPAAEDEGDTAWNYSFSQLPRFLSGSWSEFSTQPENFLKGCKWAPD 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE5 GSCILTNSADNILRIYNLPPELYHEGEQVEYAEMVPVLRMVEGDTIYDYCWYSLMSSAQP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 GSCILTNSADNILRIYNLPPELYHEGEQVEYAEMVPVLRMVEGDTIYDYCWYSLMSSAQP 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE5 DTSYVASSSRENPIHIWDAFTGELRASFRAYNHLDELTAAHSLCFSPDGSQLFCGFNRTV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 DTSYVASSSRENPIHIWDAFTGELRASFRAYNHLDELTAAHSLCFSPDGSQLFCGFNRTV 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE5 RVFSTARPGRDCEVRATFAKKQGQSGIISCIAFSPAQPLYACGSYGRSLGLYAWDDGSPL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 RVFSTARPGRDCEVRATFAKKQGQSGIISCIAFSPAQPLYACGSYGRSLGLYAWDDGSPL 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE5 ALLGGHQGGITHLCFHPDGNRFFSGARKDAELLCWDLRQSGYPLWSLGREVTTNQRIYFD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 ALLGGHQGGITHLCFHPDGNRFFSGARKDAELLCWDLRQSGYPLWSLGREVTTNQRIYFD 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE5 LDPTGQFLVSGSTSGAVSVWDTDGPGNDGKPEPVLSFLPQKDCTNGVSLHPSLPLLATAS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 LDPTGQFLVSGSTSGAVSVWDTDGPGNDGKPEPVLSFLPQKDCTNGVSLHPSLPLLATAS 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE5 GQRVFPEPTESGDEGEELGLPLLSTRHVHLECRLQLWWCGGAPDSSIPDDHQGEKGQGGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 GQRVFPEPTESGDEGEELGLPLLSTRHVHLECRLQLWWCGGAPDSSIPDDHQGEKGQGGT 490 500 510 520 530 540 pF1KE5 EGGVGELI :::::::: NP_001 EGGVGELI >>NP_001137463 (OMIM: 612661,613988) telomerase Cajal bo (548 aa) initn: 3843 init1: 3843 opt: 3843 Z-score: 2504.4 bits: 473.2 E(85289): 9.3e-133 Smith-Waterman score: 3843; 100.0% identity (100.0% similar) in 548 aa overlap (1-548:1-548) 10 20 30 40 50 60 pF1KE5 MKTLETQPLAPDCCPSDQDPAPAHPSPHASPMNKNADSELMPPPPERGDPPRLSPDPVAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MKTLETQPLAPDCCPSDQDPAPAHPSPHASPMNKNADSELMPPPPERGDPPRLSPDPVAG 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 SAVSQELREGDPVSLSTPLETEFGSPSELSPRIEEQELSENTSLPAEEANGSLSEEEANG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 SAVSQELREGDPVSLSTPLETEFGSPSELSPRIEEQELSENTSLPAEEANGSLSEEEANG 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE5 PELGSGKAMEDTSGEPAAEDEGDTAWNYSFSQLPRFLSGSWSEFSTQPENFLKGCKWAPD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 PELGSGKAMEDTSGEPAAEDEGDTAWNYSFSQLPRFLSGSWSEFSTQPENFLKGCKWAPD 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE5 GSCILTNSADNILRIYNLPPELYHEGEQVEYAEMVPVLRMVEGDTIYDYCWYSLMSSAQP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 GSCILTNSADNILRIYNLPPELYHEGEQVEYAEMVPVLRMVEGDTIYDYCWYSLMSSAQP 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE5 DTSYVASSSRENPIHIWDAFTGELRASFRAYNHLDELTAAHSLCFSPDGSQLFCGFNRTV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 DTSYVASSSRENPIHIWDAFTGELRASFRAYNHLDELTAAHSLCFSPDGSQLFCGFNRTV 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE5 RVFSTARPGRDCEVRATFAKKQGQSGIISCIAFSPAQPLYACGSYGRSLGLYAWDDGSPL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 RVFSTARPGRDCEVRATFAKKQGQSGIISCIAFSPAQPLYACGSYGRSLGLYAWDDGSPL 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE5 ALLGGHQGGITHLCFHPDGNRFFSGARKDAELLCWDLRQSGYPLWSLGREVTTNQRIYFD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 ALLGGHQGGITHLCFHPDGNRFFSGARKDAELLCWDLRQSGYPLWSLGREVTTNQRIYFD 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE5 LDPTGQFLVSGSTSGAVSVWDTDGPGNDGKPEPVLSFLPQKDCTNGVSLHPSLPLLATAS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 LDPTGQFLVSGSTSGAVSVWDTDGPGNDGKPEPVLSFLPQKDCTNGVSLHPSLPLLATAS 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE5 GQRVFPEPTESGDEGEELGLPLLSTRHVHLECRLQLWWCGGAPDSSIPDDHQGEKGQGGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 GQRVFPEPTESGDEGEELGLPLLSTRHVHLECRLQLWWCGGAPDSSIPDDHQGEKGQGGT 490 500 510 520 530 540 pF1KE5 EGGVGELI :::::::: NP_001 EGGVGELI >>NP_001137464 (OMIM: 612661,613988) telomerase Cajal bo (548 aa) initn: 3843 init1: 3843 opt: 3843 Z-score: 2504.4 bits: 473.2 E(85289): 9.3e-133 Smith-Waterman score: 3843; 100.0% identity (100.0% similar) in 548 aa overlap (1-548:1-548) 10 20 30 40 50 60 pF1KE5 MKTLETQPLAPDCCPSDQDPAPAHPSPHASPMNKNADSELMPPPPERGDPPRLSPDPVAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MKTLETQPLAPDCCPSDQDPAPAHPSPHASPMNKNADSELMPPPPERGDPPRLSPDPVAG 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 SAVSQELREGDPVSLSTPLETEFGSPSELSPRIEEQELSENTSLPAEEANGSLSEEEANG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 SAVSQELREGDPVSLSTPLETEFGSPSELSPRIEEQELSENTSLPAEEANGSLSEEEANG 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE5 PELGSGKAMEDTSGEPAAEDEGDTAWNYSFSQLPRFLSGSWSEFSTQPENFLKGCKWAPD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 PELGSGKAMEDTSGEPAAEDEGDTAWNYSFSQLPRFLSGSWSEFSTQPENFLKGCKWAPD 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE5 GSCILTNSADNILRIYNLPPELYHEGEQVEYAEMVPVLRMVEGDTIYDYCWYSLMSSAQP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 GSCILTNSADNILRIYNLPPELYHEGEQVEYAEMVPVLRMVEGDTIYDYCWYSLMSSAQP 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE5 DTSYVASSSRENPIHIWDAFTGELRASFRAYNHLDELTAAHSLCFSPDGSQLFCGFNRTV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 DTSYVASSSRENPIHIWDAFTGELRASFRAYNHLDELTAAHSLCFSPDGSQLFCGFNRTV 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE5 RVFSTARPGRDCEVRATFAKKQGQSGIISCIAFSPAQPLYACGSYGRSLGLYAWDDGSPL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 RVFSTARPGRDCEVRATFAKKQGQSGIISCIAFSPAQPLYACGSYGRSLGLYAWDDGSPL 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE5 ALLGGHQGGITHLCFHPDGNRFFSGARKDAELLCWDLRQSGYPLWSLGREVTTNQRIYFD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 ALLGGHQGGITHLCFHPDGNRFFSGARKDAELLCWDLRQSGYPLWSLGREVTTNQRIYFD 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE5 LDPTGQFLVSGSTSGAVSVWDTDGPGNDGKPEPVLSFLPQKDCTNGVSLHPSLPLLATAS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 LDPTGQFLVSGSTSGAVSVWDTDGPGNDGKPEPVLSFLPQKDCTNGVSLHPSLPLLATAS 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE5 GQRVFPEPTESGDEGEELGLPLLSTRHVHLECRLQLWWCGGAPDSSIPDDHQGEKGQGGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 GQRVFPEPTESGDEGEELGLPLLSTRHVHLECRLQLWWCGGAPDSSIPDDHQGEKGQGGT 490 500 510 520 530 540 pF1KE5 EGGVGELI :::::::: NP_001 EGGVGELI >>XP_011522254 (OMIM: 612661,613988) PREDICTED: telomera (335 aa) initn: 2368 init1: 2368 opt: 2368 Z-score: 1553.1 bits: 296.4 E(85289): 9.1e-80 Smith-Waterman score: 2368; 100.0% identity (100.0% similar) in 335 aa overlap (214-548:1-335) 190 200 210 220 230 240 pF1KE5 ILTNSADNILRIYNLPPELYHEGEQVEYAEMVPVLRMVEGDTIYDYCWYSLMSSAQPDTS :::::::::::::::::::::::::::::: XP_011 MVPVLRMVEGDTIYDYCWYSLMSSAQPDTS 10 20 30 250 260 270 280 290 300 pF1KE5 YVASSSRENPIHIWDAFTGELRASFRAYNHLDELTAAHSLCFSPDGSQLFCGFNRTVRVF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 YVASSSRENPIHIWDAFTGELRASFRAYNHLDELTAAHSLCFSPDGSQLFCGFNRTVRVF 40 50 60 70 80 90 310 320 330 340 350 360 pF1KE5 STARPGRDCEVRATFAKKQGQSGIISCIAFSPAQPLYACGSYGRSLGLYAWDDGSPLALL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 STARPGRDCEVRATFAKKQGQSGIISCIAFSPAQPLYACGSYGRSLGLYAWDDGSPLALL 100 110 120 130 140 150 370 380 390 400 410 420 pF1KE5 GGHQGGITHLCFHPDGNRFFSGARKDAELLCWDLRQSGYPLWSLGREVTTNQRIYFDLDP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 GGHQGGITHLCFHPDGNRFFSGARKDAELLCWDLRQSGYPLWSLGREVTTNQRIYFDLDP 160 170 180 190 200 210 430 440 450 460 470 480 pF1KE5 TGQFLVSGSTSGAVSVWDTDGPGNDGKPEPVLSFLPQKDCTNGVSLHPSLPLLATASGQR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 TGQFLVSGSTSGAVSVWDTDGPGNDGKPEPVLSFLPQKDCTNGVSLHPSLPLLATASGQR 220 230 240 250 260 270 490 500 510 520 530 540 pF1KE5 VFPEPTESGDEGEELGLPLLSTRHVHLECRLQLWWCGGAPDSSIPDDHQGEKGQGGTEGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 VFPEPTESGDEGEELGLPLLSTRHVHLECRLQLWWCGGAPDSSIPDDHQGEKGQGGTEGG 280 290 300 310 320 330 pF1KE5 VGELI ::::: XP_011 VGELI 548 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 05:49:24 2016 done: Tue Nov 8 05:49:25 2016 Total Scan time: 10.120 Total Display time: 0.040 Function used was FASTA [36.3.4 Apr, 2011]