Result of FASTA (omim) for
pFN21AE3140
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE3140, 350 aa
1>>>pF1KE3140 350 - 350 aa - 350 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.5036+/-0.000297; mu= 9.0804+/- 0.019
mean_var=190.0481+/-38.396, 0's: 0 Z-trim(123.7): 149 B-trim: 506 in 1/60
Lambda= 0.093034
statistics sampled from 43890 (44101) to 43890 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.806), E-opt: 0.2 (0.517), width: 16
Scan time: 8.980
The best scores are: opt bits E(85289)
NP_001307287 (OMIM: 610431) E3 ubiquitin-protein l ( 350) 2421 336.5 5.2e-92
NP_001307288 (OMIM: 610431) E3 ubiquitin-protein l ( 350) 2421 336.5 5.2e-92
NP_001307286 (OMIM: 610431) E3 ubiquitin-protein l ( 350) 2421 336.5 5.2e-92
XP_016879916 (OMIM: 610431) PREDICTED: E3 ubiquiti ( 350) 2421 336.5 5.2e-92
NP_001307285 (OMIM: 610431) E3 ubiquitin-protein l ( 350) 2421 336.5 5.2e-92
NP_001307290 (OMIM: 610431) E3 ubiquitin-protein l ( 350) 2421 336.5 5.2e-92
NP_056343 (OMIM: 610431) E3 ubiquitin-protein liga ( 350) 2421 336.5 5.2e-92
NP_001307289 (OMIM: 610431) E3 ubiquitin-protein l ( 350) 2421 336.5 5.2e-92
NP_001307294 (OMIM: 610431) E3 ubiquitin-protein l ( 315) 2186 304.9 1.5e-82
NP_001307293 (OMIM: 610431) E3 ubiquitin-protein l ( 315) 2186 304.9 1.5e-82
NP_001307291 (OMIM: 610431) E3 ubiquitin-protein l ( 315) 2186 304.9 1.5e-82
NP_001307292 (OMIM: 610431) E3 ubiquitin-protein l ( 315) 2186 304.9 1.5e-82
XP_011510675 (OMIM: 609247) PREDICTED: E3 ubiquiti ( 381) 1104 159.8 9e-39
XP_011510676 (OMIM: 609247) PREDICTED: E3 ubiquiti ( 381) 1104 159.8 9e-39
XP_016861144 (OMIM: 609247) PREDICTED: E3 ubiquiti ( 381) 1104 159.8 9e-39
NP_009213 (OMIM: 609247) E3 ubiquitin-protein liga ( 381) 1104 159.8 9e-39
XP_016861143 (OMIM: 609247) PREDICTED: E3 ubiquiti ( 381) 1104 159.8 9e-39
NP_899237 (OMIM: 609247) E3 ubiquitin-protein liga ( 381) 1104 159.8 9e-39
XP_016879917 (OMIM: 610431) PREDICTED: E3 ubiquiti ( 227) 924 135.4 1.2e-31
NP_859061 (OMIM: 612063) E3 ubiquitin-protein liga ( 429) 728 109.4 1.5e-23
XP_016861149 (OMIM: 609247) PREDICTED: E3 ubiquiti ( 250) 716 107.5 3.2e-23
XP_005247149 (OMIM: 609247) PREDICTED: E3 ubiquiti ( 262) 715 107.4 3.6e-23
XP_016861145 (OMIM: 609247) PREDICTED: E3 ubiquiti ( 262) 715 107.4 3.6e-23
XP_016861148 (OMIM: 609247) PREDICTED: E3 ubiquiti ( 262) 715 107.4 3.6e-23
XP_016861146 (OMIM: 609247) PREDICTED: E3 ubiquiti ( 262) 715 107.4 3.6e-23
XP_011510678 (OMIM: 609247) PREDICTED: E3 ubiquiti ( 262) 715 107.4 3.6e-23
XP_016861147 (OMIM: 609247) PREDICTED: E3 ubiquiti ( 262) 715 107.4 3.6e-23
XP_016861150 (OMIM: 609247) PREDICTED: E3 ubiquiti ( 193) 510 79.8 5.6e-15
NP_899196 (OMIM: 300379,300978) E3 ubiquitin-prote ( 624) 252 45.6 0.00034
NP_057204 (OMIM: 300379,300978) E3 ubiquitin-prote ( 624) 252 45.6 0.00034
NP_115549 (OMIM: 612062) E3 ubiquitin-protein liga ( 836) 247 45.1 0.00066
XP_011528740 (OMIM: 612062) PREDICTED: E3 ubiquiti ( 841) 247 45.1 0.00066
XP_011528738 (OMIM: 612062) PREDICTED: E3 ubiquiti ( 841) 247 45.1 0.00066
XP_011528739 (OMIM: 612062) PREDICTED: E3 ubiquiti ( 841) 247 45.1 0.00066
XP_011528737 (OMIM: 612062) PREDICTED: E3 ubiquiti ( 841) 247 45.1 0.00066
XP_016884479 (OMIM: 612062) PREDICTED: E3 ubiquiti ( 841) 247 45.1 0.00066
NP_078815 (OMIM: 300439) E3 ubiquitin-protein liga ( 402) 241 44.0 0.00069
NP_001193927 (OMIM: 612062) E3 ubiquitin-protein l ( 936) 247 45.1 0.00072
NP_919445 (OMIM: 300439) E3 ubiquitin-protein liga ( 428) 241 44.0 0.00072
NP_001292474 (OMIM: 612482,617108) E3 ubiquitin-pr ( 656) 243 44.5 0.00081
XP_011523258 (OMIM: 612482,617108) PREDICTED: E3 u ( 742) 243 44.5 0.00088
NP_898864 (OMIM: 133239,604242) E3 ubiquitin-prote ( 685) 242 44.3 0.00092
XP_005266543 (OMIM: 133239,604242) PREDICTED: E3 u ( 685) 242 44.3 0.00092
XP_005266542 (OMIM: 133239,604242) PREDICTED: E3 u ( 685) 242 44.3 0.00092
NP_898865 (OMIM: 133239,604242) E3 ubiquitin-prote ( 685) 242 44.3 0.00092
NP_005968 (OMIM: 133239,604242) E3 ubiquitin-prote ( 685) 242 44.3 0.00092
XP_011533479 (OMIM: 133239,604242) PREDICTED: E3 u ( 685) 242 44.3 0.00092
NP_001292473 (OMIM: 612482,617108) E3 ubiquitin-pr ( 783) 243 44.5 0.00092
NP_060233 (OMIM: 612482,617108) E3 ubiquitin-prote ( 783) 243 44.5 0.00092
XP_016880289 (OMIM: 612482,617108) PREDICTED: E3 u ( 869) 243 44.6 0.00099
>>NP_001307287 (OMIM: 610431) E3 ubiquitin-protein ligas (350 aa)
initn: 2421 init1: 2421 opt: 2421 Z-score: 1772.8 bits: 336.5 E(85289): 5.2e-92
Smith-Waterman score: 2421; 100.0% identity (100.0% similar) in 350 aa overlap (1-350:1-350)
10 20 30 40 50 60
pF1KE3 MHPAAFPLPVVVAAVLWGAAPTRGLIRATSDHNASMDFADLPALFGATLSQEGLQGFLVE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MHPAAFPLPVVVAAVLWGAAPTRGLIRATSDHNASMDFADLPALFGATLSQEGLQGFLVE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 AHPDNACSPIAPPPPAPVNGSVFIALLRRFDCNFDLKVLNAQKAGYGAAVVHNVNSNELL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AHPDNACSPIAPPPPAPVNGSVFIALLRRFDCNFDLKVLNAQKAGYGAAVVHNVNSNELL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 NMVWNSEEIQQQIWIPSVFIGERSSEYLRALFVYEKGARVLLVPDNTFPLGYYLIPFTGI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NMVWNSEEIQQQIWIPSVFIGERSSEYLRALFVYEKGARVLLVPDNTFPLGYYLIPFTGI
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE3 VGLLVLAMGAVMIARCIQHRKRLQRNRLTKEQLKQIPTHDYQKGDQYDVCAICLDEYEDG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VGLLVLAMGAVMIARCIQHRKRLQRNRLTKEQLKQIPTHDYQKGDQYDVCAICLDEYEDG
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE3 DKLRVLPCAHAYHSRCVDPWLTQTRKTCPICKQPVHRGPGDEDQEEETQGQEEGDEGEPR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DKLRVLPCAHAYHSRCVDPWLTQTRKTCPICKQPVHRGPGDEDQEEETQGQEEGDEGEPR
250 260 270 280 290 300
310 320 330 340 350
pF1KE3 DHPASERTPLLGSSPTLPTSFGSLAPAPLVFPGPSTDPPLSPPSSPVILV
::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DHPASERTPLLGSSPTLPTSFGSLAPAPLVFPGPSTDPPLSPPSSPVILV
310 320 330 340 350
>>NP_001307288 (OMIM: 610431) E3 ubiquitin-protein ligas (350 aa)
initn: 2421 init1: 2421 opt: 2421 Z-score: 1772.8 bits: 336.5 E(85289): 5.2e-92
Smith-Waterman score: 2421; 100.0% identity (100.0% similar) in 350 aa overlap (1-350:1-350)
10 20 30 40 50 60
pF1KE3 MHPAAFPLPVVVAAVLWGAAPTRGLIRATSDHNASMDFADLPALFGATLSQEGLQGFLVE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MHPAAFPLPVVVAAVLWGAAPTRGLIRATSDHNASMDFADLPALFGATLSQEGLQGFLVE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 AHPDNACSPIAPPPPAPVNGSVFIALLRRFDCNFDLKVLNAQKAGYGAAVVHNVNSNELL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AHPDNACSPIAPPPPAPVNGSVFIALLRRFDCNFDLKVLNAQKAGYGAAVVHNVNSNELL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 NMVWNSEEIQQQIWIPSVFIGERSSEYLRALFVYEKGARVLLVPDNTFPLGYYLIPFTGI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NMVWNSEEIQQQIWIPSVFIGERSSEYLRALFVYEKGARVLLVPDNTFPLGYYLIPFTGI
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE3 VGLLVLAMGAVMIARCIQHRKRLQRNRLTKEQLKQIPTHDYQKGDQYDVCAICLDEYEDG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VGLLVLAMGAVMIARCIQHRKRLQRNRLTKEQLKQIPTHDYQKGDQYDVCAICLDEYEDG
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE3 DKLRVLPCAHAYHSRCVDPWLTQTRKTCPICKQPVHRGPGDEDQEEETQGQEEGDEGEPR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DKLRVLPCAHAYHSRCVDPWLTQTRKTCPICKQPVHRGPGDEDQEEETQGQEEGDEGEPR
250 260 270 280 290 300
310 320 330 340 350
pF1KE3 DHPASERTPLLGSSPTLPTSFGSLAPAPLVFPGPSTDPPLSPPSSPVILV
::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DHPASERTPLLGSSPTLPTSFGSLAPAPLVFPGPSTDPPLSPPSSPVILV
310 320 330 340 350
>>NP_001307286 (OMIM: 610431) E3 ubiquitin-protein ligas (350 aa)
initn: 2421 init1: 2421 opt: 2421 Z-score: 1772.8 bits: 336.5 E(85289): 5.2e-92
Smith-Waterman score: 2421; 100.0% identity (100.0% similar) in 350 aa overlap (1-350:1-350)
10 20 30 40 50 60
pF1KE3 MHPAAFPLPVVVAAVLWGAAPTRGLIRATSDHNASMDFADLPALFGATLSQEGLQGFLVE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MHPAAFPLPVVVAAVLWGAAPTRGLIRATSDHNASMDFADLPALFGATLSQEGLQGFLVE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 AHPDNACSPIAPPPPAPVNGSVFIALLRRFDCNFDLKVLNAQKAGYGAAVVHNVNSNELL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AHPDNACSPIAPPPPAPVNGSVFIALLRRFDCNFDLKVLNAQKAGYGAAVVHNVNSNELL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 NMVWNSEEIQQQIWIPSVFIGERSSEYLRALFVYEKGARVLLVPDNTFPLGYYLIPFTGI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NMVWNSEEIQQQIWIPSVFIGERSSEYLRALFVYEKGARVLLVPDNTFPLGYYLIPFTGI
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE3 VGLLVLAMGAVMIARCIQHRKRLQRNRLTKEQLKQIPTHDYQKGDQYDVCAICLDEYEDG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VGLLVLAMGAVMIARCIQHRKRLQRNRLTKEQLKQIPTHDYQKGDQYDVCAICLDEYEDG
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE3 DKLRVLPCAHAYHSRCVDPWLTQTRKTCPICKQPVHRGPGDEDQEEETQGQEEGDEGEPR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DKLRVLPCAHAYHSRCVDPWLTQTRKTCPICKQPVHRGPGDEDQEEETQGQEEGDEGEPR
250 260 270 280 290 300
310 320 330 340 350
pF1KE3 DHPASERTPLLGSSPTLPTSFGSLAPAPLVFPGPSTDPPLSPPSSPVILV
::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DHPASERTPLLGSSPTLPTSFGSLAPAPLVFPGPSTDPPLSPPSSPVILV
310 320 330 340 350
>>XP_016879916 (OMIM: 610431) PREDICTED: E3 ubiquitin-pr (350 aa)
initn: 2421 init1: 2421 opt: 2421 Z-score: 1772.8 bits: 336.5 E(85289): 5.2e-92
Smith-Waterman score: 2421; 100.0% identity (100.0% similar) in 350 aa overlap (1-350:1-350)
10 20 30 40 50 60
pF1KE3 MHPAAFPLPVVVAAVLWGAAPTRGLIRATSDHNASMDFADLPALFGATLSQEGLQGFLVE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MHPAAFPLPVVVAAVLWGAAPTRGLIRATSDHNASMDFADLPALFGATLSQEGLQGFLVE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 AHPDNACSPIAPPPPAPVNGSVFIALLRRFDCNFDLKVLNAQKAGYGAAVVHNVNSNELL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AHPDNACSPIAPPPPAPVNGSVFIALLRRFDCNFDLKVLNAQKAGYGAAVVHNVNSNELL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 NMVWNSEEIQQQIWIPSVFIGERSSEYLRALFVYEKGARVLLVPDNTFPLGYYLIPFTGI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NMVWNSEEIQQQIWIPSVFIGERSSEYLRALFVYEKGARVLLVPDNTFPLGYYLIPFTGI
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE3 VGLLVLAMGAVMIARCIQHRKRLQRNRLTKEQLKQIPTHDYQKGDQYDVCAICLDEYEDG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VGLLVLAMGAVMIARCIQHRKRLQRNRLTKEQLKQIPTHDYQKGDQYDVCAICLDEYEDG
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE3 DKLRVLPCAHAYHSRCVDPWLTQTRKTCPICKQPVHRGPGDEDQEEETQGQEEGDEGEPR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DKLRVLPCAHAYHSRCVDPWLTQTRKTCPICKQPVHRGPGDEDQEEETQGQEEGDEGEPR
250 260 270 280 290 300
310 320 330 340 350
pF1KE3 DHPASERTPLLGSSPTLPTSFGSLAPAPLVFPGPSTDPPLSPPSSPVILV
::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DHPASERTPLLGSSPTLPTSFGSLAPAPLVFPGPSTDPPLSPPSSPVILV
310 320 330 340 350
>>NP_001307285 (OMIM: 610431) E3 ubiquitin-protein ligas (350 aa)
initn: 2421 init1: 2421 opt: 2421 Z-score: 1772.8 bits: 336.5 E(85289): 5.2e-92
Smith-Waterman score: 2421; 100.0% identity (100.0% similar) in 350 aa overlap (1-350:1-350)
10 20 30 40 50 60
pF1KE3 MHPAAFPLPVVVAAVLWGAAPTRGLIRATSDHNASMDFADLPALFGATLSQEGLQGFLVE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MHPAAFPLPVVVAAVLWGAAPTRGLIRATSDHNASMDFADLPALFGATLSQEGLQGFLVE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 AHPDNACSPIAPPPPAPVNGSVFIALLRRFDCNFDLKVLNAQKAGYGAAVVHNVNSNELL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AHPDNACSPIAPPPPAPVNGSVFIALLRRFDCNFDLKVLNAQKAGYGAAVVHNVNSNELL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 NMVWNSEEIQQQIWIPSVFIGERSSEYLRALFVYEKGARVLLVPDNTFPLGYYLIPFTGI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NMVWNSEEIQQQIWIPSVFIGERSSEYLRALFVYEKGARVLLVPDNTFPLGYYLIPFTGI
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE3 VGLLVLAMGAVMIARCIQHRKRLQRNRLTKEQLKQIPTHDYQKGDQYDVCAICLDEYEDG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VGLLVLAMGAVMIARCIQHRKRLQRNRLTKEQLKQIPTHDYQKGDQYDVCAICLDEYEDG
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE3 DKLRVLPCAHAYHSRCVDPWLTQTRKTCPICKQPVHRGPGDEDQEEETQGQEEGDEGEPR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DKLRVLPCAHAYHSRCVDPWLTQTRKTCPICKQPVHRGPGDEDQEEETQGQEEGDEGEPR
250 260 270 280 290 300
310 320 330 340 350
pF1KE3 DHPASERTPLLGSSPTLPTSFGSLAPAPLVFPGPSTDPPLSPPSSPVILV
::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DHPASERTPLLGSSPTLPTSFGSLAPAPLVFPGPSTDPPLSPPSSPVILV
310 320 330 340 350
>>NP_001307290 (OMIM: 610431) E3 ubiquitin-protein ligas (350 aa)
initn: 2421 init1: 2421 opt: 2421 Z-score: 1772.8 bits: 336.5 E(85289): 5.2e-92
Smith-Waterman score: 2421; 100.0% identity (100.0% similar) in 350 aa overlap (1-350:1-350)
10 20 30 40 50 60
pF1KE3 MHPAAFPLPVVVAAVLWGAAPTRGLIRATSDHNASMDFADLPALFGATLSQEGLQGFLVE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MHPAAFPLPVVVAAVLWGAAPTRGLIRATSDHNASMDFADLPALFGATLSQEGLQGFLVE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 AHPDNACSPIAPPPPAPVNGSVFIALLRRFDCNFDLKVLNAQKAGYGAAVVHNVNSNELL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AHPDNACSPIAPPPPAPVNGSVFIALLRRFDCNFDLKVLNAQKAGYGAAVVHNVNSNELL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 NMVWNSEEIQQQIWIPSVFIGERSSEYLRALFVYEKGARVLLVPDNTFPLGYYLIPFTGI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NMVWNSEEIQQQIWIPSVFIGERSSEYLRALFVYEKGARVLLVPDNTFPLGYYLIPFTGI
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE3 VGLLVLAMGAVMIARCIQHRKRLQRNRLTKEQLKQIPTHDYQKGDQYDVCAICLDEYEDG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VGLLVLAMGAVMIARCIQHRKRLQRNRLTKEQLKQIPTHDYQKGDQYDVCAICLDEYEDG
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE3 DKLRVLPCAHAYHSRCVDPWLTQTRKTCPICKQPVHRGPGDEDQEEETQGQEEGDEGEPR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DKLRVLPCAHAYHSRCVDPWLTQTRKTCPICKQPVHRGPGDEDQEEETQGQEEGDEGEPR
250 260 270 280 290 300
310 320 330 340 350
pF1KE3 DHPASERTPLLGSSPTLPTSFGSLAPAPLVFPGPSTDPPLSPPSSPVILV
::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DHPASERTPLLGSSPTLPTSFGSLAPAPLVFPGPSTDPPLSPPSSPVILV
310 320 330 340 350
>>NP_056343 (OMIM: 610431) E3 ubiquitin-protein ligase R (350 aa)
initn: 2421 init1: 2421 opt: 2421 Z-score: 1772.8 bits: 336.5 E(85289): 5.2e-92
Smith-Waterman score: 2421; 100.0% identity (100.0% similar) in 350 aa overlap (1-350:1-350)
10 20 30 40 50 60
pF1KE3 MHPAAFPLPVVVAAVLWGAAPTRGLIRATSDHNASMDFADLPALFGATLSQEGLQGFLVE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 MHPAAFPLPVVVAAVLWGAAPTRGLIRATSDHNASMDFADLPALFGATLSQEGLQGFLVE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 AHPDNACSPIAPPPPAPVNGSVFIALLRRFDCNFDLKVLNAQKAGYGAAVVHNVNSNELL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 AHPDNACSPIAPPPPAPVNGSVFIALLRRFDCNFDLKVLNAQKAGYGAAVVHNVNSNELL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 NMVWNSEEIQQQIWIPSVFIGERSSEYLRALFVYEKGARVLLVPDNTFPLGYYLIPFTGI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 NMVWNSEEIQQQIWIPSVFIGERSSEYLRALFVYEKGARVLLVPDNTFPLGYYLIPFTGI
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE3 VGLLVLAMGAVMIARCIQHRKRLQRNRLTKEQLKQIPTHDYQKGDQYDVCAICLDEYEDG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 VGLLVLAMGAVMIARCIQHRKRLQRNRLTKEQLKQIPTHDYQKGDQYDVCAICLDEYEDG
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE3 DKLRVLPCAHAYHSRCVDPWLTQTRKTCPICKQPVHRGPGDEDQEEETQGQEEGDEGEPR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 DKLRVLPCAHAYHSRCVDPWLTQTRKTCPICKQPVHRGPGDEDQEEETQGQEEGDEGEPR
250 260 270 280 290 300
310 320 330 340 350
pF1KE3 DHPASERTPLLGSSPTLPTSFGSLAPAPLVFPGPSTDPPLSPPSSPVILV
::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 DHPASERTPLLGSSPTLPTSFGSLAPAPLVFPGPSTDPPLSPPSSPVILV
310 320 330 340 350
>>NP_001307289 (OMIM: 610431) E3 ubiquitin-protein ligas (350 aa)
initn: 2421 init1: 2421 opt: 2421 Z-score: 1772.8 bits: 336.5 E(85289): 5.2e-92
Smith-Waterman score: 2421; 100.0% identity (100.0% similar) in 350 aa overlap (1-350:1-350)
10 20 30 40 50 60
pF1KE3 MHPAAFPLPVVVAAVLWGAAPTRGLIRATSDHNASMDFADLPALFGATLSQEGLQGFLVE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MHPAAFPLPVVVAAVLWGAAPTRGLIRATSDHNASMDFADLPALFGATLSQEGLQGFLVE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 AHPDNACSPIAPPPPAPVNGSVFIALLRRFDCNFDLKVLNAQKAGYGAAVVHNVNSNELL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AHPDNACSPIAPPPPAPVNGSVFIALLRRFDCNFDLKVLNAQKAGYGAAVVHNVNSNELL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 NMVWNSEEIQQQIWIPSVFIGERSSEYLRALFVYEKGARVLLVPDNTFPLGYYLIPFTGI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NMVWNSEEIQQQIWIPSVFIGERSSEYLRALFVYEKGARVLLVPDNTFPLGYYLIPFTGI
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE3 VGLLVLAMGAVMIARCIQHRKRLQRNRLTKEQLKQIPTHDYQKGDQYDVCAICLDEYEDG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VGLLVLAMGAVMIARCIQHRKRLQRNRLTKEQLKQIPTHDYQKGDQYDVCAICLDEYEDG
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE3 DKLRVLPCAHAYHSRCVDPWLTQTRKTCPICKQPVHRGPGDEDQEEETQGQEEGDEGEPR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DKLRVLPCAHAYHSRCVDPWLTQTRKTCPICKQPVHRGPGDEDQEEETQGQEEGDEGEPR
250 260 270 280 290 300
310 320 330 340 350
pF1KE3 DHPASERTPLLGSSPTLPTSFGSLAPAPLVFPGPSTDPPLSPPSSPVILV
::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DHPASERTPLLGSSPTLPTSFGSLAPAPLVFPGPSTDPPLSPPSSPVILV
310 320 330 340 350
>>NP_001307294 (OMIM: 610431) E3 ubiquitin-protein ligas (315 aa)
initn: 2186 init1: 2186 opt: 2186 Z-score: 1602.9 bits: 304.9 E(85289): 1.5e-82
Smith-Waterman score: 2186; 100.0% identity (100.0% similar) in 315 aa overlap (36-350:1-315)
10 20 30 40 50 60
pF1KE3 FPLPVVVAAVLWGAAPTRGLIRATSDHNASMDFADLPALFGATLSQEGLQGFLVEAHPDN
::::::::::::::::::::::::::::::
NP_001 MDFADLPALFGATLSQEGLQGFLVEAHPDN
10 20 30
70 80 90 100 110 120
pF1KE3 ACSPIAPPPPAPVNGSVFIALLRRFDCNFDLKVLNAQKAGYGAAVVHNVNSNELLNMVWN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ACSPIAPPPPAPVNGSVFIALLRRFDCNFDLKVLNAQKAGYGAAVVHNVNSNELLNMVWN
40 50 60 70 80 90
130 140 150 160 170 180
pF1KE3 SEEIQQQIWIPSVFIGERSSEYLRALFVYEKGARVLLVPDNTFPLGYYLIPFTGIVGLLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SEEIQQQIWIPSVFIGERSSEYLRALFVYEKGARVLLVPDNTFPLGYYLIPFTGIVGLLV
100 110 120 130 140 150
190 200 210 220 230 240
pF1KE3 LAMGAVMIARCIQHRKRLQRNRLTKEQLKQIPTHDYQKGDQYDVCAICLDEYEDGDKLRV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LAMGAVMIARCIQHRKRLQRNRLTKEQLKQIPTHDYQKGDQYDVCAICLDEYEDGDKLRV
160 170 180 190 200 210
250 260 270 280 290 300
pF1KE3 LPCAHAYHSRCVDPWLTQTRKTCPICKQPVHRGPGDEDQEEETQGQEEGDEGEPRDHPAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LPCAHAYHSRCVDPWLTQTRKTCPICKQPVHRGPGDEDQEEETQGQEEGDEGEPRDHPAS
220 230 240 250 260 270
310 320 330 340 350
pF1KE3 ERTPLLGSSPTLPTSFGSLAPAPLVFPGPSTDPPLSPPSSPVILV
:::::::::::::::::::::::::::::::::::::::::::::
NP_001 ERTPLLGSSPTLPTSFGSLAPAPLVFPGPSTDPPLSPPSSPVILV
280 290 300 310
>>NP_001307293 (OMIM: 610431) E3 ubiquitin-protein ligas (315 aa)
initn: 2186 init1: 2186 opt: 2186 Z-score: 1602.9 bits: 304.9 E(85289): 1.5e-82
Smith-Waterman score: 2186; 100.0% identity (100.0% similar) in 315 aa overlap (36-350:1-315)
10 20 30 40 50 60
pF1KE3 FPLPVVVAAVLWGAAPTRGLIRATSDHNASMDFADLPALFGATLSQEGLQGFLVEAHPDN
::::::::::::::::::::::::::::::
NP_001 MDFADLPALFGATLSQEGLQGFLVEAHPDN
10 20 30
70 80 90 100 110 120
pF1KE3 ACSPIAPPPPAPVNGSVFIALLRRFDCNFDLKVLNAQKAGYGAAVVHNVNSNELLNMVWN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ACSPIAPPPPAPVNGSVFIALLRRFDCNFDLKVLNAQKAGYGAAVVHNVNSNELLNMVWN
40 50 60 70 80 90
130 140 150 160 170 180
pF1KE3 SEEIQQQIWIPSVFIGERSSEYLRALFVYEKGARVLLVPDNTFPLGYYLIPFTGIVGLLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SEEIQQQIWIPSVFIGERSSEYLRALFVYEKGARVLLVPDNTFPLGYYLIPFTGIVGLLV
100 110 120 130 140 150
190 200 210 220 230 240
pF1KE3 LAMGAVMIARCIQHRKRLQRNRLTKEQLKQIPTHDYQKGDQYDVCAICLDEYEDGDKLRV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LAMGAVMIARCIQHRKRLQRNRLTKEQLKQIPTHDYQKGDQYDVCAICLDEYEDGDKLRV
160 170 180 190 200 210
250 260 270 280 290 300
pF1KE3 LPCAHAYHSRCVDPWLTQTRKTCPICKQPVHRGPGDEDQEEETQGQEEGDEGEPRDHPAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LPCAHAYHSRCVDPWLTQTRKTCPICKQPVHRGPGDEDQEEETQGQEEGDEGEPRDHPAS
220 230 240 250 260 270
310 320 330 340 350
pF1KE3 ERTPLLGSSPTLPTSFGSLAPAPLVFPGPSTDPPLSPPSSPVILV
:::::::::::::::::::::::::::::::::::::::::::::
NP_001 ERTPLLGSSPTLPTSFGSLAPAPLVFPGPSTDPPLSPPSSPVILV
280 290 300 310
350 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 13:57:29 2016 done: Sun Nov 6 13:57:31 2016
Total Scan time: 8.980 Total Display time: 0.040
Function used was FASTA [36.3.4 Apr, 2011]