FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1891, 420 aa 1>>>pF1KE1891 420 - 420 aa - 420 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.5437+/-0.000787; mu= 11.3397+/- 0.047 mean_var=80.5759+/-16.163, 0's: 0 Z-trim(108.4): 16 B-trim: 0 in 0/52 Lambda= 0.142880 statistics sampled from 10149 (10156) to 10149 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.681), E-opt: 0.2 (0.312), width: 16 Scan time: 3.150 The best scores are: opt bits E(32554) CCDS10997.1 MRM3 gene_id:55178|Hs108|chr17 ( 420) 2814 589.5 2e-168 >>CCDS10997.1 MRM3 gene_id:55178|Hs108|chr17 (420 aa) initn: 2814 init1: 2814 opt: 2814 Z-score: 3137.3 bits: 589.5 E(32554): 2e-168 Smith-Waterman score: 2814; 100.0% identity (100.0% similar) in 420 aa overlap (1-420:1-420) 10 20 30 40 50 60 pF1KE1 MAALVRPARFVVRPLLQVVQAWDLDARRWVRALRRSPVKVVFPSGEVVEQKRAPGKQPRK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 MAALVRPARFVVRPLLQVVQAWDLDARRWVRALRRSPVKVVFPSGEVVEQKRAPGKQPRK 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 APSEASAQEQREKQPLEESASRAPSTWEESGLRYDKAYPGDRRLSSVMTIVKSRPFREKQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 APSEASAQEQREKQPLEESASRAPSTWEESGLRYDKAYPGDRRLSSVMTIVKSRPFREKQ 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 GKILLEGRRLISDALKAGAVPKMFFFSRLEYLKELPVDKLKGVSLIKVKFEDIKDWSDLV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 GKILLEGRRLISDALKAGAVPKMFFFSRLEYLKELPVDKLKGVSLIKVKFEDIKDWSDLV 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 TPQGIMGIFAKPDHVKMTYPKTQLQHSLPLLLICDNLRDPGNLGTILRSAAGAGCSKVLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 TPQGIMGIFAKPDHVKMTYPKTQLQHSLPLLLICDNLRDPGNLGTILRSAAGAGCSKVLL 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE1 TKGCVDAWEPKVLRAGMGAHFRMPIINNLEWETVPNYLPPDTRVYVADNCGLYAQAEMSN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 TKGCVDAWEPKVLRAGMGAHFRMPIINNLEWETVPNYLPPDTRVYVADNCGLYAQAEMSN 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE1 KASDHGWVCDQRVMKFHKYEEEEDVETGASQDWLPHVEVQSYDSDWTEAPAAVVIGGETY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 KASDHGWVCDQRVMKFHKYEEEEDVETGASQDWLPHVEVQSYDSDWTEAPAAVVIGGETY 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE1 GVSLESLQLAESTGGKRLLIPVVPGVDSLNSAMAASILLFEGKRQLRGRAEDLSRDRSYH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 GVSLESLQLAESTGGKRLLIPVVPGVDSLNSAMAASILLFEGKRQLRGRAEDLSRDRSYH 370 380 390 400 410 420 420 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 14:01:25 2016 done: Sun Nov 6 14:01:25 2016 Total Scan time: 3.150 Total Display time: -0.030 Function used was FASTA [36.3.4 Apr, 2011]