FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1625, 142 aa 1>>>pF1KE1625 142 - 142 aa - 142 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 4.6714+/-0.000377; mu= 14.5159+/- 0.023 mean_var=53.1045+/-10.821, 0's: 0 Z-trim(111.3): 33 B-trim: 633 in 1/55 Lambda= 0.175998 statistics sampled from 19827 (19852) to 19827 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.622), E-opt: 0.2 (0.233), width: 16 Scan time: 4.700 The best scores are: opt bits E(85289) NP_066972 (OMIM: 606748) coactosin-like protein [H ( 142) 922 241.8 2.8e-64 NP_001014436 (OMIM: 610106) drebrin-like protein i ( 430) 152 46.6 5.1e-05 NP_054782 (OMIM: 610106) drebrin-like protein isof ( 431) 152 46.6 5.1e-05 XP_011513627 (OMIM: 610106) PREDICTED: drebrin-lik ( 438) 152 46.6 5.1e-05 NP_001116428 (OMIM: 610106) drebrin-like protein i ( 439) 152 46.6 5.1e-05 >>NP_066972 (OMIM: 606748) coactosin-like protein [Homo (142 aa) initn: 922 init1: 922 opt: 922 Z-score: 1274.9 bits: 241.8 E(85289): 2.8e-64 Smith-Waterman score: 922; 100.0% identity (100.0% similar) in 142 aa overlap (1-142:1-142) 10 20 30 40 50 60 pF1KE1 MATKIDKEACRAAYNLVRDDGSAVIWVTFKYDGSTIVPGEQGAEYQHFIQQCTDDVRLFA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_066 MATKIDKEACRAAYNLVRDDGSAVIWVTFKYDGSTIVPGEQGAEYQHFIQQCTDDVRLFA 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 FVRFTTGDAMSKRSKFALITWIGENVSGLQRAKTGTDKTLVKEVVQNFAKEFVISDRKEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_066 FVRFTTGDAMSKRSKFALITWIGENVSGLQRAKTGTDKTLVKEVVQNFAKEFVISDRKEL 70 80 90 100 110 120 130 140 pF1KE1 EEDFIKSELKKAGGANYDAQTE :::::::::::::::::::::: NP_066 EEDFIKSELKKAGGANYDAQTE 130 140 >>NP_001014436 (OMIM: 610106) drebrin-like protein isofo (430 aa) initn: 98 init1: 98 opt: 152 Z-score: 211.2 bits: 46.6 E(85289): 5.1e-05 Smith-Waterman score: 152; 23.8% identity (58.5% similar) in 147 aa overlap (1-142:1-145) 10 20 30 40 50 pF1KE1 MATKIDKE--ACRAAYNLVRDDGSAVIWVTFKYDGSTI---VPGEQGAEYQHFIQQCTDD ::...... : . :: : . : . :. : :.:.. : : . ...... .. NP_001 MAANLSRNGPALQEAYVRVVTEKSPTDWALFTYEGNSNDIRVAGTGEGGLEEMVEELNSG 10 20 30 40 50 60 60 70 80 90 100 110 pF1KE1 VRLFAFVRFTTGDAMSKRSKFALITWIGENVSGLQRAKTGTDKTLVKEVVQNFAKEFVIS ..:: : . : : ::.::.: ::.:. .... .. . . ... . NP_001 KVMYAFCR--VKDPNSGLPKFVLINWTGEGVNDVRKGACASHVSTMASFLKGAHVTINAR 70 80 90 100 110 120 130 140 pF1KE1 DRKELEEDFIKSELKKAGGANYDAQTE ....: . : .. ::.::::. . : NP_001 AEEDVEPECIMEKVAKASGANYSFHKESGRFQDVGPQAPVGSVYQKTNAVSEIKRVGKDS 120 130 140 150 160 170 >>NP_054782 (OMIM: 610106) drebrin-like protein isoform (431 aa) initn: 98 init1: 98 opt: 152 Z-score: 211.1 bits: 46.6 E(85289): 5.1e-05 Smith-Waterman score: 152; 23.8% identity (58.5% similar) in 147 aa overlap (1-142:1-145) 10 20 30 40 50 pF1KE1 MATKIDKE--ACRAAYNLVRDDGSAVIWVTFKYDGSTI---VPGEQGAEYQHFIQQCTDD ::...... : . :: : . : . :. : :.:.. : : . ...... .. NP_054 MAANLSRNGPALQEAYVRVVTEKSPTDWALFTYEGNSNDIRVAGTGEGGLEEMVEELNSG 10 20 30 40 50 60 60 70 80 90 100 110 pF1KE1 VRLFAFVRFTTGDAMSKRSKFALITWIGENVSGLQRAKTGTDKTLVKEVVQNFAKEFVIS ..:: : . : : ::.::.: ::.:. .... .. . . ... . NP_054 KVMYAFCR--VKDPNSGLPKFVLINWTGEGVNDVRKGACASHVSTMASFLKGAHVTINAR 70 80 90 100 110 120 130 140 pF1KE1 DRKELEEDFIKSELKKAGGANYDAQTE ....: . : .. ::.::::. . : NP_054 AEEDVEPECIMEKVAKASGANYSFHKESGRFQDVGPQAPVGSVYQKTNAVSEIKRVGKDS 120 130 140 150 160 170 >>XP_011513627 (OMIM: 610106) PREDICTED: drebrin-like pr (438 aa) initn: 98 init1: 98 opt: 152 Z-score: 211.0 bits: 46.6 E(85289): 5.1e-05 Smith-Waterman score: 152; 23.8% identity (58.5% similar) in 147 aa overlap (1-142:1-145) 10 20 30 40 50 pF1KE1 MATKIDKE--ACRAAYNLVRDDGSAVIWVTFKYDGSTI---VPGEQGAEYQHFIQQCTDD ::...... : . :: : . : . :. : :.:.. : : . ...... .. XP_011 MAANLSRNGPALQEAYVRVVTEKSPTDWALFTYEGNSNDIRVAGTGEGGLEEMVEELNSG 10 20 30 40 50 60 60 70 80 90 100 110 pF1KE1 VRLFAFVRFTTGDAMSKRSKFALITWIGENVSGLQRAKTGTDKTLVKEVVQNFAKEFVIS ..:: : . : : ::.::.: ::.:. .... .. . . ... . XP_011 KVMYAFCR--VKDPNSGLPKFVLINWTGEGVNDVRKGACASHVSTMASFLKGAHVTINAR 70 80 90 100 110 120 130 140 pF1KE1 DRKELEEDFIKSELKKAGGANYDAQTE ....: . : .. ::.::::. . : XP_011 AEEDVEPECIMEKVAKASGANYSFHKESGRFQDVGPQAPVGSVYQKTNAVSEIKRVGKDS 120 130 140 150 160 170 >>NP_001116428 (OMIM: 610106) drebrin-like protein isofo (439 aa) initn: 98 init1: 98 opt: 152 Z-score: 211.0 bits: 46.6 E(85289): 5.1e-05 Smith-Waterman score: 152; 23.8% identity (58.5% similar) in 147 aa overlap (1-142:1-145) 10 20 30 40 50 pF1KE1 MATKIDKE--ACRAAYNLVRDDGSAVIWVTFKYDGSTI---VPGEQGAEYQHFIQQCTDD ::...... : . :: : . : . :. : :.:.. : : . ...... .. NP_001 MAANLSRNGPALQEAYVRVVTEKSPTDWALFTYEGNSNDIRVAGTGEGGLEEMVEELNSG 10 20 30 40 50 60 60 70 80 90 100 110 pF1KE1 VRLFAFVRFTTGDAMSKRSKFALITWIGENVSGLQRAKTGTDKTLVKEVVQNFAKEFVIS ..:: : . : : ::.::.: ::.:. .... .. . . ... . NP_001 KVMYAFCR--VKDPNSGLPKFVLINWTGEGVNDVRKGACASHVSTMASFLKGAHVTINAR 70 80 90 100 110 120 130 140 pF1KE1 DRKELEEDFIKSELKKAGGANYDAQTE ....: . : .. ::.::::. . : NP_001 AEEDVEPECIMEKVAKASGANYSFHKESGRFQDVGPQAPVGSVYQKTNAVSEIKRVGKDS 120 130 140 150 160 170 142 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 14:03:38 2016 done: Sun Nov 6 14:03:38 2016 Total Scan time: 4.700 Total Display time: -0.040 Function used was FASTA [36.3.4 Apr, 2011]