FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KB9813, 272 aa 1>>>pF1KB9813 272 - 272 aa - 272 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.6023+/-0.000676; mu= 10.5821+/- 0.041 mean_var=114.6554+/-23.037, 0's: 0 Z-trim(114.2): 8 B-trim: 3 in 1/50 Lambda= 0.119778 statistics sampled from 14785 (14791) to 14785 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.781), E-opt: 0.2 (0.454), width: 16 Scan time: 2.550 The best scores are: opt bits E(32554) CCDS10887.1 EXOSC6 gene_id:118460|Hs108|chr16 ( 272) 1805 321.8 3.2e-88 >>CCDS10887.1 EXOSC6 gene_id:118460|Hs108|chr16 (272 aa) initn: 1805 init1: 1805 opt: 1805 Z-score: 1697.4 bits: 321.8 E(32554): 3.2e-88 Smith-Waterman score: 1805; 100.0% identity (100.0% similar) in 272 aa overlap (1-272:1-272) 10 20 30 40 50 60 pF1KB9 MPGDHRRIRGPEESQPPQLYAADEEEAPGTRDPTRLRPVYARAGLLSQAKGSAYLEAGGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 MPGDHRRIRGPEESQPPQLYAADEEEAPGTRDPTRLRPVYARAGLLSQAKGSAYLEAGGT 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB9 KVLCAVSGPRQAEGGERGGGPAGAGGEAPAALRGRLLCDFRRAPFAGRRRRAPPGGCEER :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 KVLCAVSGPRQAEGGERGGGPAGAGGEAPAALRGRLLCDFRRAPFAGRRRRAPPGGCEER 70 80 90 100 110 120 130 140 150 160 170 180 pF1KB9 ELALALQEALEPAVRLGRYPRAQLEVSALLLEDGGSALAAALTAAALALADAGVEMYDLV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 ELALALQEALEPAVRLGRYPRAQLEVSALLLEDGGSALAAALTAAALALADAGVEMYDLV 130 140 150 160 170 180 190 200 210 220 230 240 pF1KB9 VGCGLSLAPGPAPTWLLDPTRLEEERAAAGLTVALMPVLNQVAGLLGSGEGGLTESWAEA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 VGCGLSLAPGPAPTWLLDPTRLEEERAAAGLTVALMPVLNQVAGLLGSGEGGLTESWAEA 190 200 210 220 230 240 250 260 270 pF1KB9 VRLGLEGCQRLYPVLQQSLVRAARRRGAAAQP :::::::::::::::::::::::::::::::: CCDS10 VRLGLEGCQRLYPVLQQSLVRAARRRGAAAQP 250 260 270 272 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 07:38:48 2016 done: Tue Nov 8 07:38:49 2016 Total Scan time: 2.550 Total Display time: -0.030 Function used was FASTA [36.3.4 Apr, 2011]