FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE4043, 266 aa 1>>>pF1KE4043 266 - 266 aa - 266 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.4566+/-0.000929; mu= 9.6525+/- 0.056 mean_var=93.8643+/-18.547, 0's: 0 Z-trim(107.3): 34 B-trim: 0 in 0/53 Lambda= 0.132380 statistics sampled from 9501 (9514) to 9501 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.665), E-opt: 0.2 (0.292), width: 16 Scan time: 2.320 The best scores are: opt bits E(32554) CCDS10628.2 NSMCE1 gene_id:197370|Hs108|chr16 ( 266) 1779 349.8 1.2e-96 >>CCDS10628.2 NSMCE1 gene_id:197370|Hs108|chr16 (266 aa) initn: 1779 init1: 1779 opt: 1779 Z-score: 1848.6 bits: 349.8 E(32554): 1.2e-96 Smith-Waterman score: 1779; 99.6% identity (99.6% similar) in 266 aa overlap (1-266:1-266) 10 20 30 40 50 60 pF1KE4 MQGSTRRMGVMTDVHRRFLQLLMTHGVLEEWDVKRLQRHCYKVHDRNATVDKLEDFINNI ::::::::::::::::::::::::::::::::::::: :::::::::::::::::::::: CCDS10 MQGSTRRMGVMTDVHRRFLQLLMTHGVLEEWDVKRLQTHCYKVHDRNATVDKLEDFINNI 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 NSVLESLYIEIKRGVTEDDGRPIYALVNLATTSISKMATDFAENELDLFRKALELIIDSE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 NSVLESLYIEIKRGVTEDDGRPIYALVNLATTSISKMATDFAENELDLFRKALELIIDSE 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 TGFASSTNILNLVDQLKGKKMRKKEAEQVLQKFVQNKWLIEKEGEFTLHGRAILEMEQYI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 TGFASSTNILNLVDQLKGKKMRKKEAEQVLQKFVQNKWLIEKEGEFTLHGRAILEMEQYI 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE4 RETYPDAVKICNICHSLLIQGQSCETCGIRMHLPCVAKYFQSNAEPRCPHCNDYWPHEIP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 RETYPDAVKICNICHSLLIQGQSCETCGIRMHLPCVAKYFQSNAEPRCPHCNDYWPHEIP 190 200 210 220 230 240 250 260 pF1KE4 KVFDPEKERESGVLKSNKKSLRSRQH :::::::::::::::::::::::::: CCDS10 KVFDPEKERESGVLKSNKKSLRSRQH 250 260 266 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 04:17:47 2016 done: Sun Nov 6 04:17:48 2016 Total Scan time: 2.320 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]