Result of FASTA (omim) for
pFN21AE6269
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE6269, 255 aa
1>>>pF1KE6269 255 - 255 aa - 255 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.6666+/-0.00038; mu= 18.3952+/- 0.023
mean_var=65.1089+/-13.298, 0's: 0 Z-trim(113.2): 47 B-trim: 0 in 0/52
Lambda= 0.158948
statistics sampled from 22420 (22456) to 22420 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.628), E-opt: 0.2 (0.263), width: 16
Scan time: 5.660
The best scores are: opt bits E(85289)
NP_001160 (OMIM: 603750) aquaporin-8 [Homo sapiens ( 261) 1713 401.4 8.2e-112
XP_011544124 (OMIM: 603750) PREDICTED: aquaporin-8 ( 262) 1713 401.4 8.2e-112
XP_011544125 (OMIM: 603750) PREDICTED: aquaporin-8 ( 148) 599 145.8 4.3e-35
NP_001642 (OMIM: 600442) aquaporin-5 [Homo sapiens ( 265) 448 111.3 1.7e-24
NP_000477 (OMIM: 107777,125800) aquaporin-2 [Homo ( 271) 420 104.9 1.5e-22
NP_036196 (OMIM: 154050,615274) lens fiber major i ( 263) 396 99.4 6.8e-21
XP_011524244 (OMIM: 600308) PREDICTED: aquaporin-4 ( 316) 396 99.5 7.7e-21
NP_004019 (OMIM: 600308) aquaporin-4 isoform M23 [ ( 301) 395 99.2 8.8e-21
NP_001641 (OMIM: 600308) aquaporin-4 isoform M1 [H ( 323) 395 99.3 9.2e-21
NP_001304313 (OMIM: 600308) aquaporin-4 isoform M1 ( 352) 395 99.3 9.8e-21
XP_005268895 (OMIM: 600442) PREDICTED: aquaporin-5 ( 222) 390 98.0 1.5e-20
NP_001643 (OMIM: 601383) aquaporin-6 [Homo sapiens ( 282) 373 94.2 2.8e-19
NP_932766 (OMIM: 107776,110450) aquaporin-1 isofor ( 269) 346 88.0 1.9e-17
NP_001316801 (OMIM: 107776,110450) aquaporin-1 iso ( 323) 346 88.0 2.2e-17
NP_001304316 (OMIM: 600308) aquaporin-4 isoform de ( 296) 225 60.2 4.7e-09
XP_011536656 (OMIM: 154050,615274) PREDICTED: lens ( 168) 215 57.7 1.5e-08
XP_016874795 (OMIM: 154050,615274) PREDICTED: lens ( 144) 213 57.2 1.9e-08
NP_001305073 (OMIM: 600170,607457) aquaporin-3 iso ( 237) 197 53.7 3.4e-07
NP_004916 (OMIM: 600170,607457) aquaporin-3 isofor ( 292) 197 53.8 4e-07
NP_066190 (OMIM: 602914) aquaporin-9 isoform 1 [Ho ( 295) 197 53.8 4e-07
NP_001307564 (OMIM: 602914) aquaporin-9 isoform 2 ( 193) 194 53.0 4.7e-07
NP_536354 (OMIM: 606578) aquaporin-10 [Homo sapien ( 301) 156 44.4 0.00028
XP_011508406 (OMIM: 606578) PREDICTED: aquaporin-1 ( 302) 154 44.0 0.00038
NP_001307565 (OMIM: 602914) aquaporin-9 isoform 3 ( 230) 149 42.7 0.00069
NP_945349 (OMIM: 609789) aquaporin-12A precursor [ ( 295) 138 40.3 0.0047
>>NP_001160 (OMIM: 603750) aquaporin-8 [Homo sapiens] (261 aa)
initn: 1713 init1: 1713 opt: 1713 Z-score: 2128.4 bits: 401.4 E(85289): 8.2e-112
Smith-Waterman score: 1713; 100.0% identity (100.0% similar) in 255 aa overlap (1-255:7-261)
10 20 30 40 50
pF1KE6 MCEPEFGNDKAREPSVGGRWRVSWYERFVQPCLVELLGSALFIFIGCLSVIENG
::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MSGEIAMCEPEFGNDKAREPSVGGRWRVSWYERFVQPCLVELLGSALFIFIGCLSVIENG
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE6 TDTGLLQPALAHGLALGLVIATLGNISGGHFNPAVSLAAMLIGGLNLVMLLPYWVSQLLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TDTGLLQPALAHGLALGLVIATLGNISGGHFNPAVSLAAMLIGGLNLVMLLPYWVSQLLG
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE6 GMLGAALAKAVSPEERFWNASGAAFVTVQEQGQVAGALVAEIILTTLLALAVCMGAINEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GMLGAALAKAVSPEERFWNASGAAFVTVQEQGQVAGALVAEIILTTLLALAVCMGAINEK
130 140 150 160 170 180
180 190 200 210 220 230
pF1KE6 TKGPLAPFSIGFAVTVDILAGGPVSGGCMNPARAFGPAVVANHWNFHWIYWLGPLLAGLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TKGPLAPFSIGFAVTVDILAGGPVSGGCMNPARAFGPAVVANHWNFHWIYWLGPLLAGLL
190 200 210 220 230 240
240 250
pF1KE6 VGLLIRCFIGDGKTRLILKAR
:::::::::::::::::::::
NP_001 VGLLIRCFIGDGKTRLILKAR
250 260
>>XP_011544124 (OMIM: 603750) PREDICTED: aquaporin-8 iso (262 aa)
initn: 1713 init1: 1713 opt: 1713 Z-score: 2128.3 bits: 401.4 E(85289): 8.2e-112
Smith-Waterman score: 1713; 100.0% identity (100.0% similar) in 255 aa overlap (1-255:8-262)
10 20 30 40 50
pF1KE6 MCEPEFGNDKAREPSVGGRWRVSWYERFVQPCLVELLGSALFIFIGCLSVIEN
:::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MSGEQIAMCEPEFGNDKAREPSVGGRWRVSWYERFVQPCLVELLGSALFIFIGCLSVIEN
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE6 GTDTGLLQPALAHGLALGLVIATLGNISGGHFNPAVSLAAMLIGGLNLVMLLPYWVSQLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GTDTGLLQPALAHGLALGLVIATLGNISGGHFNPAVSLAAMLIGGLNLVMLLPYWVSQLL
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE6 GGMLGAALAKAVSPEERFWNASGAAFVTVQEQGQVAGALVAEIILTTLLALAVCMGAINE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GGMLGAALAKAVSPEERFWNASGAAFVTVQEQGQVAGALVAEIILTTLLALAVCMGAINE
130 140 150 160 170 180
180 190 200 210 220 230
pF1KE6 KTKGPLAPFSIGFAVTVDILAGGPVSGGCMNPARAFGPAVVANHWNFHWIYWLGPLLAGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KTKGPLAPFSIGFAVTVDILAGGPVSGGCMNPARAFGPAVVANHWNFHWIYWLGPLLAGL
190 200 210 220 230 240
240 250
pF1KE6 LVGLLIRCFIGDGKTRLILKAR
::::::::::::::::::::::
XP_011 LVGLLIRCFIGDGKTRLILKAR
250 260
>>XP_011544125 (OMIM: 603750) PREDICTED: aquaporin-8 iso (148 aa)
initn: 673 init1: 554 opt: 599 Z-score: 751.1 bits: 145.8 E(85289): 4.3e-35
Smith-Waterman score: 744; 54.9% identity (54.9% similar) in 255 aa overlap (1-255:8-148)
10 20 30 40 50
pF1KE6 MCEPEFGNDKAREPSVGGRWRVSWYERFVQPCLVELLGSALFIFIGCLSVIEN
:::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MSGEQIAMCEPEFGNDKAREPSVGGRWRVSWYERFVQPCLVELLGSALFIFIGCLSVIEN
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE6 GTDTGLLQPALAHGLALGLVIATLGNISGGHFNPAVSLAAMLIGGLNLVMLLPYWVSQLL
::::::::::::::::::::::::::: :
XP_011 GTDTGLLQPALAHGLALGLVIATLGNIRG-------------------------------
70 80
120 130 140 150 160 170
pF1KE6 GGMLGAALAKAVSPEERFWNASGAAFVTVQEQGQVAGALVAEIILTTLLALAVCMGAINE
XP_011 ------------------------------------------------------------
180 190 200 210 220 230
pF1KE6 KTKGPLAPFSIGFAVTVDILAGGPVSGGCMNPARAFGPAVVANHWNFHWIYWLGPLLAGL
:::::::::::::::::::::::::::::::::::::
XP_011 -----------------------PVSGGCMNPARAFGPAVVANHWNFHWIYWLGPLLAGL
90 100 110 120
240 250
pF1KE6 LVGLLIRCFIGDGKTRLILKAR
::::::::::::::::::::::
XP_011 LVGLLIRCFIGDGKTRLILKAR
130 140
>>NP_001642 (OMIM: 600442) aquaporin-5 [Homo sapiens] (265 aa)
initn: 441 init1: 197 opt: 448 Z-score: 560.5 bits: 111.3 E(85289): 1.7e-24
Smith-Waterman score: 448; 37.7% identity (72.1% similar) in 215 aa overlap (28-238:10-220)
10 20 30 40 50
pF1KE6 MCEPEFGNDKAREPSVGGRWRVSWYERFVQPCLVELLGSALFIFIGCLSVIENGTDTG-L
:.. ..:.:.. .:.:.: :... . .
NP_001 MKKEVCSVAFLKAVFAEFLATLIFVFFGLGSALKWPSALPTI
10 20 30 40
60 70 80 90 100 110
pF1KE6 LQPALAHGLALGLVIATLGNISGGHFNPAVSLAAMLIGG-LNLVMLLPYWVSQLLGGMLG
:: ::: :::.: . .:: .::::.:::..:: .:.:. ..:. . : ..::.:.. :
NP_001 LQIALAFGLAIGTLAQALGPVSGGHINPAITLA-LLVGNQISLLRAFFYVAAQLVGAIAG
50 60 70 80 90 100
120 130 140 150 160 170
pF1KE6 AALAKAVSPEERFWNASGAAFVTVQEQGQVAGALVAEIILTTLLALAVCMGAINEKTKGP
:.. .:.: . : . :. . ::: :.:.:.::: ::: . .. ...:.
NP_001 AGILYGVAPLNARGNLAVNALNNNTTQGQ---AMVVELILTFQLALCIFASTDSRRTSPV
110 120 130 140 150
180 190 200 210 220 230
pF1KE6 LAP-FSIGFAVTVDILAGGPVSGGCMNPARAFGPAVVANHWN-FHWIYWLGPLLAGLLVG
.: .:::..::. :.: .: :::::.:::::: :... ::..:.::.....:..
NP_001 GSPALSIGLSVTLGHLVGIYFTGCSMNPARSFGPAVVMNRFSPAHWVFWVGPIVGAVLAA
160 170 180 190 200 210
240 250
pF1KE6 LLIRCFIGDGKTRLILKAR
.:
NP_001 ILYFYLLFPNSLSLSERVAIIKGTYEPDEDWEEQREERKKTMELTTR
220 230 240 250 260
>>NP_000477 (OMIM: 107777,125800) aquaporin-2 [Homo sapi (271 aa)
initn: 353 init1: 187 opt: 420 Z-score: 525.7 bits: 104.9 E(85289): 1.5e-22
Smith-Waterman score: 420; 35.5% identity (68.4% similar) in 228 aa overlap (24-243:2-222)
10 20 30 40 50
pF1KE6 MCEPEFGNDKAREPSVGGRWRVSWYER---FVQPCLVELLGSALFIFIGCLSVIE-NGTD
: : : . ..:.:.. ::.:.: :... .
NP_000 MWELRSIAFSRAVFAEFLATLLFVFFGLGSALNWPQAL
10 20 30
60 70 80 90 100 110
pF1KE6 TGLLQPALAHGLALGLVIATLGNISGGHFNPAVSLAAMLIGGLNLVMLLPYWVS-QLLGG
..:: :.: ::..: .. .::.:::.:.::::..: :.: :. ..:. ::::.
NP_000 PSVLQIAMAFGLGIGTLVQALGHISGAHINPAVTVAC-LVGCHVSVLRAAFYVAAQLLGA
40 50 60 70 80 90
120 130 140 150 160 170
pF1KE6 MLGAALAKAVSPEERFWNASGAAFVTVQEQGQVAGALVAEIILTTLLALAVCMGAINEKT
. :::: . ..: . . . :. . :: :...:..:: : :..:. : ...
NP_000 VAGAALLHEITPADIRGDLAVNALSNSTTAGQ---AVTVELFLT--LQLVLCIFASTDER
100 110 120 130 140 150
180 190 200 210 220 230
pF1KE6 KG--PLAP-FSIGFAVTVDILAGGPVSGGCMNPARAFGPAVVANHWNFHWIYWLGPLLAG
.: : .: .::::.:.. : : .: :::::...::::..... ::..:.:::. :
NP_000 RGENPGTPALSIGFSVALGHLLGIHYTGCSMNPARSLAPAVVTGKFDDHWVFWIGPLV-G
160 170 180 190 200 210
240 250
pF1KE6 LLVGLLIRCFIGDGKTRLILKAR
..: :. ..
NP_000 AILGSLLYNYVLFPPAKSLSERLAVLKGLEPDTDWEEREVRRRQSVELHSPQSLPRGTKA
220 230 240 250 260 270
>>NP_036196 (OMIM: 154050,615274) lens fiber major intri (263 aa)
initn: 354 init1: 185 opt: 396 Z-score: 496.1 bits: 99.4 E(85289): 6.8e-21
Smith-Waterman score: 396; 33.3% identity (68.9% similar) in 222 aa overlap (24-238:2-218)
10 20 30 40 50
pF1KE6 MCEPEFGNDKAREPSVGGRWRVSWYER---FVQPCLVELLGSALFIFIGCLSVIENGTDT
: : : . ..:.... ...:.: : .. .
NP_036 MWELRSASFWRAIFAEFFATLFYVFFGLGSSLRWAPGP
10 20 30
60 70 80 90 100 110
pF1KE6 -GLLQPALAHGLALGLVIATLGNISGGHFNPAVSLAAMLIGGLNLVMLLPYWVSQLLGGM
.:: :.: ::::. .. ..:.:::.: ::::..: .. . ..:. . : ..::::..
NP_036 LHVLQVAMAFGLALATLVQSVGHISGAHVNPAVTFAFLVGSQMSLLRAFCYMAAQLLGAV
40 50 60 70 80 90
120 130 140 150 160 170
pF1KE6 LGAALAKAVSPEERFWNASGAAFVTVQEQGQVAGALVAEIILTTLLALAVCMGAI-NEKT
:::. .:.: : :. :.. .:. : ..::.:: : ...:. : .:.
NP_036 AGAAVLYSVTPPAVRGN---LALNTLHPAVSVGQATTVEIFLT--LQFVLCIFATYDERR
100 110 120 130 140 150
180 190 200 210 220 230
pF1KE6 KGPLAP--FSIGFAVTVDILAGGPVSGGCMNPARAFGPAVVANHWNFHWIYWLGPLLAGL
.: :. ...::.... : : .:. :::::.:.::....... ::.::.::...:
NP_036 NGQLGSVALAVGFSLALGHLFGMYYTGAGMNPARSFAPAILTGNFTNHWVYWVGPIIGGG
160 170 180 190 200 210
240 250
pF1KE6 LVGLLIRCFIGDGKTRLILKAR
: .::
NP_036 LGSLLYDFLLFPRLKSISERLSVLKGAKPDVSNGQPEVTGEPVELNTQAL
220 230 240 250 260
>>XP_011524244 (OMIM: 600308) PREDICTED: aquaporin-4 iso (316 aa)
initn: 383 init1: 211 opt: 396 Z-score: 495.1 bits: 99.5 E(85289): 7.7e-21
Smith-Waterman score: 396; 32.5% identity (66.3% similar) in 246 aa overlap (1-238:1-240)
10 20 30 40 50
pF1KE6 MCEPEFGNDKAREPSVGGRWRVSWYERFVQPCLVELLGSALFIFIGCLSVIE-NGTDTGL
: : . : .:: .. .. : . : . .:.:. .:.... :.:. .::. :
XP_011 MFEIKCGPLCTRE-NIMVAFKGVWTQAFWKAVTAEFLAMLIFVLLSLGSTINWGGTEKPL
10 20 30 40 50
60 70 80 90 100 110
pF1KE6 LQPALAHGLALGLVIATL----GNISGGHFNPAVSLAAMLIGGLNLVMLLPYWVSQLLGG
. .: .:: :::. :.:::::.::::..: . .... . : ..: ::.
XP_011 PVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYIAAQCLGA
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE6 MLGAALAKAVSPEERFWNASGAAFVTVQEQGQVAG-ALVAEIILTTLLALAVCMGAINEK
..::.. :.: .. :. ::. . . .:: .:..:.:.: :.... . ...
XP_011 IIGAGILYLVTPP----SVVGGLGVTMVHGNLTAGHGLLVELIITFQLVFTIFASCDSKR
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE6 TK--GPLAPFSIGFAVTVDILAGGPVSGGCMNPARAFGPAVVANHWNFHWIYWLGPLLAG
: : .: ..:::.:.. : . .:. :::::.:::::. ..:. :::::.::....
XP_011 TDVTGSIA-LAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGNWENHWIYWVGPIIGA
180 190 200 210 220 230
240 250
pF1KE6 LLVGLLIRCFIGDGKTRLILKAR
.:.: :
XP_011 VLAGGLYEYVFCPDVEFKRRFKEAFSKAAQQTKGSYMEVEDNRSQVETDDLILKPGVVHV
240 250 260 270 280 290
>>NP_004019 (OMIM: 600308) aquaporin-4 isoform M23 [Homo (301 aa)
initn: 383 init1: 211 opt: 395 Z-score: 494.1 bits: 99.2 E(85289): 8.8e-21
Smith-Waterman score: 395; 33.6% identity (68.2% similar) in 223 aa overlap (24-238:8-225)
10 20 30 40 50
pF1KE6 MCEPEFGNDKAREPSVGGRWRVSWYERFVQPCLVELLGSALFIFIGCLSVIE-NGTDTGL
: . : . .:.:. .:.... :.:. .::. :
NP_004 MVAFKGVWTQAFWKAVTAEFLAMLIFVLLSLGSTINWGGTEKPL
10 20 30 40
60 70 80 90 100 110
pF1KE6 LQPALAHGLALGLVIATL----GNISGGHFNPAVSLAAMLIGGLNLVMLLPYWVSQLLGG
. .: .:: :::. :.:::::.::::..: . .... . : ..: ::.
NP_004 PVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYIAAQCLGA
50 60 70 80 90 100
120 130 140 150 160 170
pF1KE6 MLGAALAKAVSPEERFWNASGAAFVTVQEQGQVAG-ALVAEIILTTLLALAVCMGAINEK
..::.. :.: .. :. ::. . . .:: .:..:.:.: :.... . ...
NP_004 IIGAGILYLVTPP----SVVGGLGVTMVHGNLTAGHGLLVELIITFQLVFTIFASCDSKR
110 120 130 140 150 160
180 190 200 210 220 230
pF1KE6 TK--GPLAPFSIGFAVTVDILAGGPVSGGCMNPARAFGPAVVANHWNFHWIYWLGPLLAG
: : .: ..:::.:.. : . .:. :::::.:::::. ..:. :::::.::....
NP_004 TDVTGSIA-LAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGNWENHWIYWVGPIIGA
170 180 190 200 210
240 250
pF1KE6 LLVGLLIRCFIGDGKTRLILKAR
.:.: :
NP_004 VLAGGLYEYVFCPDVEFKRRFKEAFSKAAQQTKGSYMEVEDNRSQVETDDLILKPGVVHV
220 230 240 250 260 270
>>NP_001641 (OMIM: 600308) aquaporin-4 isoform M1 [Homo (323 aa)
initn: 383 init1: 211 opt: 395 Z-score: 493.7 bits: 99.3 E(85289): 9.2e-21
Smith-Waterman score: 395; 33.6% identity (68.2% similar) in 223 aa overlap (24-238:30-247)
10 20 30 40 50
pF1KE6 MCEPEFGNDKAREPSVGGRWRVSWYERFVQPCLVELLGSALFIFIGCLSVIE-N
: . : . .:.:. .:.... :.:. .
NP_001 MSDRPTARRWGKCGPLCTRENIMVAFKGVWTQAFWKAVTAEFLAMLIFVLLSLGSTINWG
10 20 30 40 50 60
60 70 80 90 100
pF1KE6 GTDTGLLQPALAHGLALGLVIATL----GNISGGHFNPAVSLAAMLIGGLNLVMLLPYWV
::. : . .: .:: :::. :.:::::.::::..: . .... . : .
NP_001 GTEKPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYIA
70 80 90 100 110 120
110 120 130 140 150 160
pF1KE6 SQLLGGMLGAALAKAVSPEERFWNASGAAFVTVQEQGQVAG-ALVAEIILTTLLALAVCM
.: ::...::.. :.: .. :. ::. . . .:: .:..:.:.: :....
NP_001 AQCLGAIIGAGILYLVTPP----SVVGGLGVTMVHGNLTAGHGLLVELIITFQLVFTIFA
130 140 150 160 170
170 180 190 200 210 220
pF1KE6 GAINEKTK--GPLAPFSIGFAVTVDILAGGPVSGGCMNPARAFGPAVVANHWNFHWIYWL
. ...: : .: ..:::.:.. : . .:. :::::.:::::. ..:. :::::.
NP_001 SCDSKRTDVTGSIA-LAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGNWENHWIYWV
180 190 200 210 220 230
230 240 250
pF1KE6 GPLLAGLLVGLLIRCFIGDGKTRLILKAR
::.....:.: :
NP_001 GPIIGAVLAGGLYEYVFCPDVEFKRRFKEAFSKAAQQTKGSYMEVEDNRSQVETDDLILK
240 250 260 270 280 290
>>NP_001304313 (OMIM: 600308) aquaporin-4 isoform M1x [H (352 aa)
initn: 383 init1: 211 opt: 395 Z-score: 493.2 bits: 99.3 E(85289): 9.8e-21
Smith-Waterman score: 395; 33.6% identity (68.2% similar) in 223 aa overlap (24-238:30-247)
10 20 30 40 50
pF1KE6 MCEPEFGNDKAREPSVGGRWRVSWYERFVQPCLVELLGSALFIFIGCLSVIE-N
: . : . .:.:. .:.... :.:. .
NP_001 MSDRPTARRWGKCGPLCTRENIMVAFKGVWTQAFWKAVTAEFLAMLIFVLLSLGSTINWG
10 20 30 40 50 60
60 70 80 90 100
pF1KE6 GTDTGLLQPALAHGLALGLVIATL----GNISGGHFNPAVSLAAMLIGGLNLVMLLPYWV
::. : . .: .:: :::. :.:::::.::::..: . .... . : .
NP_001 GTEKPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYIA
70 80 90 100 110 120
110 120 130 140 150 160
pF1KE6 SQLLGGMLGAALAKAVSPEERFWNASGAAFVTVQEQGQVAG-ALVAEIILTTLLALAVCM
.: ::...::.. :.: .. :. ::. . . .:: .:..:.:.: :....
NP_001 AQCLGAIIGAGILYLVTPP----SVVGGLGVTMVHGNLTAGHGLLVELIITFQLVFTIFA
130 140 150 160 170
170 180 190 200 210 220
pF1KE6 GAINEKTK--GPLAPFSIGFAVTVDILAGGPVSGGCMNPARAFGPAVVANHWNFHWIYWL
. ...: : .: ..:::.:.. : . .:. :::::.:::::. ..:. :::::.
NP_001 SCDSKRTDVTGSIA-LAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGNWENHWIYWV
180 190 200 210 220 230
230 240 250
pF1KE6 GPLLAGLLVGLLIRCFIGDGKTRLILKAR
::.....:.: :
NP_001 GPIIGAVLAGGLYEYVFCPDVEFKRRFKEAFSKAAQQTKGSYMEVEDNRSQVETDDLILK
240 250 260 270 280 290
255 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Tue Nov 8 11:38:58 2016 done: Tue Nov 8 11:38:59 2016
Total Scan time: 5.660 Total Display time: 0.000
Function used was FASTA [36.3.4 Apr, 2011]