FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE2483, 335 aa 1>>>pF1KE2483 335 - 335 aa - 335 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.5576+/-0.000476; mu= 15.0646+/- 0.029 mean_var=111.4255+/-20.649, 0's: 0 Z-trim(111.7): 143 B-trim: 33 in 1/52 Lambda= 0.121502 statistics sampled from 20178 (20355) to 20178 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.593), E-opt: 0.2 (0.239), width: 16 Scan time: 7.240 The best scores are: opt bits E(85289) NP_001108086 (OMIM: 602281) lactadherin isoform b ( 335) 2357 424.5 1.5e-118 NP_005919 (OMIM: 602281) lactadherin isoform a pre ( 387) 2040 369.0 9e-102 NP_001297249 (OMIM: 602281) lactadherin isoform c ( 379) 1880 341.0 2.5e-93 XP_016877695 (OMIM: 602281) PREDICTED: lactadherin ( 243) 1588 289.6 4.7e-78 NP_001297248 (OMIM: 602281) lactadherin isoform d ( 343) 1541 281.5 1.8e-75 NP_001297250 (OMIM: 602281) lactadherin isoform e ( 275) 1258 231.8 1.3e-60 NP_001265571 (OMIM: 606018) EGF-like repeat and di ( 470) 929 174.4 4.3e-43 NP_005702 (OMIM: 606018) EGF-like repeat and disco ( 480) 929 174.4 4.4e-43 XP_016856149 (OMIM: 188055,227400,600880,601367,61 (2087) 574 112.8 6.4e-24 NP_000121 (OMIM: 188055,227400,600880,601367,61230 (2224) 574 112.9 6.7e-24 NP_000123 (OMIM: 134500,300841,306700) coagulation (2351) 539 106.8 4.9e-22 NP_001019800 (OMIM: 602069) neuropilin-1 isoform c ( 609) 385 79.1 2.6e-14 XP_011518058 (OMIM: 602069) PREDICTED: neuropilin- ( 628) 385 79.2 2.7e-14 NP_001019799 (OMIM: 602069) neuropilin-1 isoform b ( 644) 385 79.2 2.7e-14 XP_011518057 (OMIM: 602069) PREDICTED: neuropilin- ( 656) 385 79.2 2.8e-14 XP_006717589 (OMIM: 602069) PREDICTED: neuropilin- ( 663) 385 79.2 2.8e-14 XP_016872355 (OMIM: 602069) PREDICTED: neuropilin- ( 742) 385 79.2 3e-14 XP_006717588 (OMIM: 602069) PREDICTED: neuropilin- ( 888) 385 79.3 3.4e-14 XP_006717587 (OMIM: 602069) PREDICTED: neuropilin- ( 889) 385 79.3 3.4e-14 XP_016872354 (OMIM: 602069) PREDICTED: neuropilin- ( 899) 385 79.3 3.4e-14 NP_001316997 (OMIM: 602069) neuropilin-1 isoform f ( 906) 385 79.3 3.4e-14 XP_006717585 (OMIM: 602069) PREDICTED: neuropilin- ( 907) 385 79.3 3.4e-14 NP_001231902 (OMIM: 602069) neuropilin-1 isoform e ( 916) 385 79.3 3.4e-14 NP_001231901 (OMIM: 602069) neuropilin-1 isoform d ( 917) 385 79.3 3.4e-14 NP_003864 (OMIM: 602069) neuropilin-1 isoform a pr ( 923) 385 79.3 3.5e-14 XP_006717584 (OMIM: 602069) PREDICTED: neuropilin- ( 924) 385 79.3 3.5e-14 NP_063916 (OMIM: 134500,300841,306700) coagulation ( 216) 324 68.0 2.2e-11 XP_016867439 (OMIM: 604569,610042,612100) PREDICTE ( 714) 237 53.3 1.9e-06 NP_054860 (OMIM: 604569,610042,612100) contactin-a (1331) 237 53.6 2.9e-06 NP_000321 (OMIM: 300839,312700) retinoschisin prec ( 224) 199 46.1 8.7e-05 NP_001171628 (OMIM: 609555) probable carboxypeptid ( 660) 204 47.4 9.8e-05 NP_062555 (OMIM: 609555) probable carboxypeptidase ( 734) 204 47.5 0.00011 NP_387504 (OMIM: 610517) contactin-associated prot (1288) 199 46.9 0.00028 NP_003623 (OMIM: 602346,616286) contactin-associat (1384) 189 45.2 0.001 XP_016880727 (OMIM: 602346,616286) PREDICTED: cont (1384) 189 45.2 0.001 XP_011510721 (OMIM: 608698) PREDICTED: discoidin, ( 699) 176 42.6 0.0031 NP_563615 (OMIM: 608698) discoidin, CUB and LCCL d ( 775) 176 42.6 0.0033 NP_001309108 (OMIM: 610518) contactin-associated p (1228) 178 43.2 0.0035 NP_620481 (OMIM: 610518) contactin-associated prot (1235) 178 43.2 0.0035 NP_001309107 (OMIM: 610518) contactin-associated p (1258) 178 43.2 0.0036 NP_001309119 (OMIM: 610518) contactin-associated p (1260) 178 43.2 0.0036 NP_001309117 (OMIM: 610518) contactin-associated p (1273) 178 43.2 0.0036 XP_011521705 (OMIM: 610518) PREDICTED: contactin-a (1283) 178 43.2 0.0036 NP_207837 (OMIM: 610518) contactin-associated prot (1308) 178 43.2 0.0037 NP_957716 (OMIM: 602070) neuropilin-2 isoform 6 pr ( 555) 165 40.5 0.01 >>NP_001108086 (OMIM: 602281) lactadherin isoform b prec (335 aa) initn: 2357 init1: 2357 opt: 2357 Z-score: 2249.2 bits: 424.5 E(85289): 1.5e-118 Smith-Waterman score: 2357; 99.7% identity (100.0% similar) in 335 aa overlap (1-335:1-335) 10 20 30 40 50 60 pF1KE2 MPRPRLLAALCGALLCAPSLLVALDICSKNPCHNGGLCEEISQEVRGDVFPSYTCTCLKG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MPRPRLLAALCGALLCAPSLLVALDICSKNPCHNGGLCEEISQEVRGDVFPSYTCTCLKG 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 YAGNHCETKCVEPLGMENGNIANSQIAASSVRVTFLGLQHWVPELARLNRAGMVNAWTPS :::::::::::::::.:::::::::::::::::::::::::::::::::::::::::::: NP_001 YAGNHCETKCVEPLGLENGNIANSQIAASSVRVTFLGLQHWVPELARLNRAGMVNAWTPS 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 SNDDNPWIQVNLLRRMWVTGVVTQGASRLASHEYLKAFKVAYSLNGHEFDFIHDVNKKHK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 SNDDNPWIQVNLLRRMWVTGVVTQGASRLASHEYLKAFKVAYSLNGHEFDFIHDVNKKHK 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE2 EFVGNWNKNAVHVNLFETPVEAQYVRLYPTSCHTACTLRFELLGCELNGCANPLGLKNNS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 EFVGNWNKNAVHVNLFETPVEAQYVRLYPTSCHTACTLRFELLGCELNGCANPLGLKNNS 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE2 IPDKQITASSSYKTWGLHLFSWNPSYARLDKQGNFNAWVAGSYGNDQWLQIFPGNWDNHS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 IPDKQITASSSYKTWGLHLFSWNPSYARLDKQGNFNAWVAGSYGNDQWLQIFPGNWDNHS 250 260 270 280 290 300 310 320 330 pF1KE2 HKKNLFETPILARYVRILPVAWHNRIALRLELLGC ::::::::::::::::::::::::::::::::::: NP_001 HKKNLFETPILARYVRILPVAWHNRIALRLELLGC 310 320 330 >>NP_005919 (OMIM: 602281) lactadherin isoform a preprop (387 aa) initn: 2214 init1: 2040 opt: 2040 Z-score: 1948.1 bits: 369.0 E(85289): 9e-102 Smith-Waterman score: 2103; 85.6% identity (85.8% similar) in 367 aa overlap (1-315:1-367) 10 20 30 40 50 60 pF1KE2 MPRPRLLAALCGALLCAPSLLVALDICSKNPCHNGGLCEEISQEVRGDVFPSYTCTCLKG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_005 MPRPRLLAALCGALLCAPSLLVALDICSKNPCHNGGLCEEISQEVRGDVFPSYTCTCLKG 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 YAGNHCETKCVEPLGMENGNIANSQIAASSVRVTFLGLQHWVPELARLNRAGMVNAWTPS :::::::::::::::.:::::::::::::::::::::::::::::::::::::::::::: NP_005 YAGNHCETKCVEPLGLENGNIANSQIAASSVRVTFLGLQHWVPELARLNRAGMVNAWTPS 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 SNDDNPWIQVNLLRRMWVTGVVTQGASRLASHEYLKAFKVAYSLNGHEFDFIHDVNKKHK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_005 SNDDNPWIQVNLLRRMWVTGVVTQGASRLASHEYLKAFKVAYSLNGHEFDFIHDVNKKHK 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE2 EFVGNWNKNAVHVNLFETPVEAQYVRLYPTSCHTACTLRFELLGCELNGCANPLGLKNNS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_005 EFVGNWNKNAVHVNLFETPVEAQYVRLYPTSCHTACTLRFELLGCELNGCANPLGLKNNS 190 200 210 220 230 240 250 260 270 280 290 pF1KE2 IPDKQITASSSYKTWGLHLFSWNPSYARLDKQGNFNAWVAGSYGNDQWLQ---------- :::::::::::::::::::::::::::::::::::::::::::::::::: NP_005 IPDKQITASSSYKTWGLHLFSWNPSYARLDKQGNFNAWVAGSYGNDQWLQVDLGSSKEVT 250 260 270 280 290 300 300 pF1KE2 ------------------------------------------IFPGNWDNHSHKKNLFET :::::::::::::::::: NP_005 GIITQGARNFGSVQFVASYKVAYSNDSANWTEYQDPRTGSSKIFPGNWDNHSHKKNLFET 310 320 330 340 350 360 310 320 330 pF1KE2 PILARYVRILPVAWHNRIALRLELLGC ::::::: NP_005 PILARYVRILPVAWHNRIALRLELLGC 370 380 >>NP_001297249 (OMIM: 602281) lactadherin isoform c [Hom (379 aa) initn: 2054 init1: 1880 opt: 1880 Z-score: 1796.6 bits: 341.0 E(85289): 2.5e-93 Smith-Waterman score: 1943; 84.5% identity (84.8% similar) in 343 aa overlap (25-315:17-359) 10 20 30 40 50 60 pF1KE2 MPRPRLLAALCGALLCAPSLLVALDICSKNPCHNGGLCEEISQEVRGDVFPSYTCTCLKG :::::::::::::::::::::::::::::::::::: NP_001 MWPFPEGGNTIPILHTDICSKNPCHNGGLCEEISQEVRGDVFPSYTCTCLKG 10 20 30 40 50 70 80 90 100 110 120 pF1KE2 YAGNHCETKCVEPLGMENGNIANSQIAASSVRVTFLGLQHWVPELARLNRAGMVNAWTPS :::::::::::::::.:::::::::::::::::::::::::::::::::::::::::::: NP_001 YAGNHCETKCVEPLGLENGNIANSQIAASSVRVTFLGLQHWVPELARLNRAGMVNAWTPS 60 70 80 90 100 110 130 140 150 160 170 180 pF1KE2 SNDDNPWIQVNLLRRMWVTGVVTQGASRLASHEYLKAFKVAYSLNGHEFDFIHDVNKKHK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 SNDDNPWIQVNLLRRMWVTGVVTQGASRLASHEYLKAFKVAYSLNGHEFDFIHDVNKKHK 120 130 140 150 160 170 190 200 210 220 230 240 pF1KE2 EFVGNWNKNAVHVNLFETPVEAQYVRLYPTSCHTACTLRFELLGCELNGCANPLGLKNNS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 EFVGNWNKNAVHVNLFETPVEAQYVRLYPTSCHTACTLRFELLGCELNGCANPLGLKNNS 180 190 200 210 220 230 250 260 270 280 290 pF1KE2 IPDKQITASSSYKTWGLHLFSWNPSYARLDKQGNFNAWVAGSYGNDQWLQ---------- :::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 IPDKQITASSSYKTWGLHLFSWNPSYARLDKQGNFNAWVAGSYGNDQWLQVDLGSSKEVT 240 250 260 270 280 290 300 pF1KE2 ------------------------------------------IFPGNWDNHSHKKNLFET :::::::::::::::::: NP_001 GIITQGARNFGSVQFVASYKVAYSNDSANWTEYQDPRTGSSKIFPGNWDNHSHKKNLFET 300 310 320 330 340 350 310 320 330 pF1KE2 PILARYVRILPVAWHNRIALRLELLGC ::::::: NP_001 PILARYVRILPVAWHNRIALRLELLGC 360 370 >>XP_016877695 (OMIM: 602281) PREDICTED: lactadherin iso (243 aa) initn: 1588 init1: 1588 opt: 1588 Z-score: 1522.4 bits: 289.6 E(85289): 4.7e-78 Smith-Waterman score: 1588; 99.6% identity (100.0% similar) in 228 aa overlap (1-228:1-228) 10 20 30 40 50 60 pF1KE2 MPRPRLLAALCGALLCAPSLLVALDICSKNPCHNGGLCEEISQEVRGDVFPSYTCTCLKG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 MPRPRLLAALCGALLCAPSLLVALDICSKNPCHNGGLCEEISQEVRGDVFPSYTCTCLKG 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 YAGNHCETKCVEPLGMENGNIANSQIAASSVRVTFLGLQHWVPELARLNRAGMVNAWTPS :::::::::::::::.:::::::::::::::::::::::::::::::::::::::::::: XP_016 YAGNHCETKCVEPLGLENGNIANSQIAASSVRVTFLGLQHWVPELARLNRAGMVNAWTPS 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 SNDDNPWIQVNLLRRMWVTGVVTQGASRLASHEYLKAFKVAYSLNGHEFDFIHDVNKKHK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 SNDDNPWIQVNLLRRMWVTGVVTQGASRLASHEYLKAFKVAYSLNGHEFDFIHDVNKKHK 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE2 EFVGNWNKNAVHVNLFETPVEAQYVRLYPTSCHTACTLRFELLGCELNGCANPLGLKNNS :::::::::::::::::::::::::::::::::::::::::::::::: XP_016 EFVGNWNKNAVHVNLFETPVEAQYVRLYPTSCHTACTLRFELLGCELNARKADLRRGADD 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE2 IPDKQITASSSYKTWGLHLFSWNPSYARLDKQGNFNAWVAGSYGNDQWLQIFPGNWDNHS XP_016 REQ >>NP_001297248 (OMIM: 602281) lactadherin isoform d prec (343 aa) initn: 1791 init1: 1540 opt: 1541 Z-score: 1476.0 bits: 281.5 E(85289): 1.8e-75 Smith-Waterman score: 1667; 73.3% identity (73.8% similar) in 367 aa overlap (1-315:1-323) 10 20 30 40 50 60 pF1KE2 MPRPRLLAALCGALLCAPSLLVALDICSKNPCHNGGLCEEISQEVRGDVFPSYTCTCLKG ::::::::::::::::::::::::. NP_001 MPRPRLLAALCGALLCAPSLLVALE----------------------------------- 10 20 70 80 90 100 110 120 pF1KE2 YAGNHCETKCVEPLGMENGNIANSQIAASSVRVTFLGLQHWVPELARLNRAGMVNAWTPS ::::::.:::::::::::::::::::::::::::::::::::::::::::: NP_001 ---------CVEPLGLENGNIANSQIAASSVRVTFLGLQHWVPELARLNRAGMVNAWTPS 30 40 50 60 70 130 140 150 160 170 180 pF1KE2 SNDDNPWIQVNLLRRMWVTGVVTQGASRLASHEYLKAFKVAYSLNGHEFDFIHDVNKKHK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 SNDDNPWIQVNLLRRMWVTGVVTQGASRLASHEYLKAFKVAYSLNGHEFDFIHDVNKKHK 80 90 100 110 120 130 190 200 210 220 230 240 pF1KE2 EFVGNWNKNAVHVNLFETPVEAQYVRLYPTSCHTACTLRFELLGCELNGCANPLGLKNNS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 EFVGNWNKNAVHVNLFETPVEAQYVRLYPTSCHTACTLRFELLGCELNGCANPLGLKNNS 140 150 160 170 180 190 250 260 270 280 290 pF1KE2 IPDKQITASSSYKTWGLHLFSWNPSYARLDKQGNFNAWVAGSYGNDQWLQ---------- :::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 IPDKQITASSSYKTWGLHLFSWNPSYARLDKQGNFNAWVAGSYGNDQWLQVDLGSSKEVT 200 210 220 230 240 250 300 pF1KE2 ------------------------------------------IFPGNWDNHSHKKNLFET :::::::::::::::::: NP_001 GIITQGARNFGSVQFVASYKVAYSNDSANWTEYQDPRTGSSKIFPGNWDNHSHKKNLFET 260 270 280 290 300 310 310 320 330 pF1KE2 PILARYVRILPVAWHNRIALRLELLGC ::::::: NP_001 PILARYVRILPVAWHNRIALRLELLGC 320 330 340 >>NP_001297250 (OMIM: 602281) lactadherin isoform e [Hom (275 aa) initn: 1258 init1: 1258 opt: 1258 Z-score: 1209.1 bits: 231.8 E(85289): 1.3e-60 Smith-Waterman score: 1321; 79.6% identity (79.6% similar) in 255 aa overlap (113-315:1-255) 90 100 110 120 130 140 pF1KE2 NSQIAASSVRVTFLGLQHWVPELARLNRAGMVNAWTPSSNDDNPWIQVNLLRRMWVTGVV :::::::::::::::::::::::::::::: NP_001 MVNAWTPSSNDDNPWIQVNLLRRMWVTGVV 10 20 30 150 160 170 180 190 200 pF1KE2 TQGASRLASHEYLKAFKVAYSLNGHEFDFIHDVNKKHKEFVGNWNKNAVHVNLFETPVEA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 TQGASRLASHEYLKAFKVAYSLNGHEFDFIHDVNKKHKEFVGNWNKNAVHVNLFETPVEA 40 50 60 70 80 90 210 220 230 240 250 260 pF1KE2 QYVRLYPTSCHTACTLRFELLGCELNGCANPLGLKNNSIPDKQITASSSYKTWGLHLFSW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 QYVRLYPTSCHTACTLRFELLGCELNGCANPLGLKNNSIPDKQITASSSYKTWGLHLFSW 100 110 120 130 140 150 270 280 290 pF1KE2 NPSYARLDKQGNFNAWVAGSYGNDQWLQ-------------------------------- :::::::::::::::::::::::::::: NP_001 NPSYARLDKQGNFNAWVAGSYGNDQWLQVDLGSSKEVTGIITQGARNFGSVQFVASYKVA 160 170 180 190 200 210 300 310 320 330 pF1KE2 --------------------IFPGNWDNHSHKKNLFETPILARYVRILPVAWHNRIALRL ::::::::::::::::::::::::: NP_001 YSNDSANWTEYQDPRTGSSKIFPGNWDNHSHKKNLFETPILARYVRILPVAWHNRIALRL 220 230 240 250 260 270 pF1KE2 ELLGC NP_001 ELLGC >>NP_001265571 (OMIM: 606018) EGF-like repeat and discoi (470 aa) initn: 937 init1: 441 opt: 929 Z-score: 894.6 bits: 174.4 E(85289): 4.3e-43 Smith-Waterman score: 938; 45.4% identity (68.7% similar) in 313 aa overlap (19-291:60-370) 10 20 30 40 pF1KE2 MPRPRLLAALCGALLCAPSLLVALDICSKNPCHNGGLCEEISQEVRGD : .: . :. ::::::: :: ::. ::: NP_001 PCENGGICLPGLADGSFSCECPDGFTDPNCSSVVEVGPCTPNPCHNGGTCE-ISEAYRGD 30 40 50 60 70 80 50 60 70 pF1KE2 VFPSYTCTCLKGYAGNHCET--------------------------------------KC .: .:.: : .:. : ::. :: NP_001 TFIGYVCKCPRGFNGIHCQHNINECEVEPCKNGGICTDLVANYSCECPGEFMGRNCQYKC 90 100 110 120 130 140 80 90 100 110 120 130 pF1KE2 VEPLGMENGNIANSQIAASSVRVTFLGLQHWVPELARLNRAGMVNAWTPSSNDDNPWIQV :::.:.: :.:.::.:::.. ...:::.: : ::::. :..:::: . :: ::::. NP_001 SGPLGIEGGIISNQQITASSTHRALFGLQKWYPYYARLNKKGLINAWTAAENDRWPWIQI 150 160 170 180 190 200 140 150 160 170 180 pF1KE2 NLLRRMWVTGVVTQGASRLASHEYLKAFKVAYSLNGHEFDFIHDVNKKHKEFV--GNWNK :: :.: ::::.::::.:..: ::.:..:.::: .:. . .. :. ....: :: .. NP_001 NLQRKMRVTGVITQGAKRIGSPEYIKSYKIAYSNDGKTWA-MYKVKGTNEDMVFRGNIDN 210 220 230 240 250 260 190 200 210 220 230 240 pF1KE2 NAVHVNLFETPVEAQYVRLYPTSCHTACTLRFELLGCELNGCANPLGLKNNSIPDKQITA :. ..: : :..:::::::: :. ::::.:::::::.::..:::.:.. : : :::: NP_001 NTPYANSFTPPIKAQYVRLYPQVCRRHCTLRMELLGCELSGCSEPLGMKSGHIQDYQITA 270 280 290 300 310 320 250 260 270 280 290 300 pF1KE2 SSSYKTWGLHLFSWNPSYARLDKQGNFNAWVAGSYGNDQWLQIFPGNWDNHSHKKNLFET :: ..: .. .:.:.: :::::::. :::..: ..::::. NP_001 SSIFRTLNMDMFTWEPRKARLDKQGKVNAWTSGHNDQSQWLQVDLLVPTKVTGIITQGAK 330 340 350 360 370 380 310 320 330 pF1KE2 PILARYVRILPVAWHNRIALRLELLGC NP_001 DFGHVQFVGSYKLAYSNDGEHWTVYQDEKQRKDKVFQGNFDNDTHRKNVIDPPIYARHIR 390 400 410 420 430 440 >-- initn: 299 init1: 205 opt: 206 Z-score: 209.7 bits: 47.6 E(85289): 6.1e-05 Smith-Waterman score: 206; 42.3% identity (77.5% similar) in 71 aa overlap (265-335:397-466) 240 250 260 270 280 290 pF1KE2 GLKNNSIPDKQITASSSYKTWGLHLFSWNPSYARLDKQGNFNAWVAGSYGNDQWLQIFPG :: .: ... . :.. . ... ..: : NP_001 WLQVDLLVPTKVTGIITQGAKDFGHVQFVGSY-KLAYSNDGEHWTVYQDEKQRKDKVFQG 370 380 390 400 410 420 300 310 320 330 pF1KE2 NWDNHSHKKNLFETPILARYVRILPVAWHNRIALRLELLGC :.:: .:.::... :: ::..:::: .:..::.:: ::::: NP_001 NFDNDTHRKNVIDPPIYARHIRILPWSWYGRITLRSELLGCTEEE 430 440 450 460 470 >>NP_005702 (OMIM: 606018) EGF-like repeat and discoidin (480 aa) initn: 933 init1: 441 opt: 929 Z-score: 894.5 bits: 174.4 E(85289): 4.4e-43 Smith-Waterman score: 934; 45.9% identity (69.2% similar) in 305 aa overlap (27-291:78-380) 10 20 30 40 50 pF1KE2 MPRPRLLAALCGALLCAPSLLVALDICSKNPCHNGGLCEEISQEVRGDVFPSYTCT :. ::::::: :: ::. :::.: .:.: NP_005 CECPDGFTDPNCSSVVEVASDEEEPTSAGPCTPNPCHNGGTCE-ISEAYRGDTFIGYVCK 50 60 70 80 90 100 60 70 pF1KE2 CLKGYAGNHCET--------------------------------------KCVEPLGMEN : .:. : ::. :: :::.:. NP_005 CPRGFNGIHCQHNINECEVEPCKNGGICTDLVANYSCECPGEFMGRNCQYKCSGPLGIEG 110 120 130 140 150 160 80 90 100 110 120 130 pF1KE2 GNIANSQIAASSVRVTFLGLQHWVPELARLNRAGMVNAWTPSSNDDNPWIQVNLLRRMWV : :.:.::.:::.. ...:::.: : ::::. :..:::: . :: ::::.:: :.: : NP_005 GIISNQQITASSTHRALFGLQKWYPYYARLNKKGLINAWTAAENDRWPWIQINLQRKMRV 170 180 190 200 210 220 140 150 160 170 180 190 pF1KE2 TGVVTQGASRLASHEYLKAFKVAYSLNGHEFDFIHDVNKKHKEFV--GNWNKNAVHVNLF :::.::::.:..: ::.:..:.::: .:. . .. :. ....: :: ..:. ..: : NP_005 TGVITQGAKRIGSPEYIKSYKIAYSNDGKTWA-MYKVKGTNEDMVFRGNIDNNTPYANSF 230 240 250 260 270 280 200 210 220 230 240 250 pF1KE2 ETPVEAQYVRLYPTSCHTACTLRFELLGCELNGCANPLGLKNNSIPDKQITASSSYKTWG :..:::::::: :. ::::.:::::::.::..:::.:.. : : :::::: ..: . NP_005 TPPIKAQYVRLYPQVCRRHCTLRMELLGCELSGCSEPLGMKSGHIQDYQITASSIFRTLN 290 300 310 320 330 340 260 270 280 290 300 310 pF1KE2 LHLFSWNPSYARLDKQGNFNAWVAGSYGNDQWLQIFPGNWDNHSHKKNLFETPILARYVR . .:.:.: :::::::. :::..: ..::::. NP_005 MDMFTWEPRKARLDKQGKVNAWTSGHNDQSQWLQVDLLVPTKVTGIITQGAKDFGHVQFV 350 360 370 380 390 400 320 330 pF1KE2 ILPVAWHNRIALRLELLGC NP_005 GSYKLAYSNDGEHWTVYQDEKQRKDKVFQGNFDNDTHRKNVIDPPIYARHIRILPWSWYG 410 420 430 440 450 460 >-- initn: 299 init1: 205 opt: 206 Z-score: 209.5 bits: 47.6 E(85289): 6.2e-05 Smith-Waterman score: 206; 42.3% identity (77.5% similar) in 71 aa overlap (265-335:407-476) 240 250 260 270 280 290 pF1KE2 GLKNNSIPDKQITASSSYKTWGLHLFSWNPSYARLDKQGNFNAWVAGSYGNDQWLQIFPG :: .: ... . :.. . ... ..: : NP_005 WLQVDLLVPTKVTGIITQGAKDFGHVQFVGSY-KLAYSNDGEHWTVYQDEKQRKDKVFQG 380 390 400 410 420 430 300 310 320 330 pF1KE2 NWDNHSHKKNLFETPILARYVRILPVAWHNRIALRLELLGC :.:: .:.::... :: ::..:::: .:..::.:: ::::: NP_005 NFDNDTHRKNVIDPPIYARHIRILPWSWYGRITLRSELLGCTEEE 440 450 460 470 480 >>XP_016856149 (OMIM: 188055,227400,600880,601367,612309 (2087 aa) initn: 599 init1: 240 opt: 574 Z-score: 550.4 bits: 112.8 E(85289): 6.4e-24 Smith-Waterman score: 574; 42.1% identity (67.1% similar) in 228 aa overlap (70-291:1770-1988) 40 50 60 70 80 90 pF1KE2 EISQEVRGDVFPSYTCTCLKGYAGNHCETKCVEPLGMENGNIANSQIAASSVRVTFLGLQ : :.:. .: :..::: :: ::: XP_016 SKPGWWLLNTEVGENQRAGMQTPFLIMDRDCRMPMGLSTGIISDSQIKASE----FLG-- 1740 1750 1760 1770 1780 1790 100 110 120 130 140 150 pF1KE2 HWVPELARLNRAGMVNAWT----PSSNDDNPWIQVNLLRRMWVTGVVTQGASRLASHEYL .: :.::::: .: :::. . ..:::::.. ... .::. ::::.. . : XP_016 YWEPRLARLNNGGSYNAWSVEKLAAEFASKPWIQVDMQKEVIITGIQTQGAKHYLKSCYT 1800 1810 1820 1830 1840 1850 160 170 180 190 200 210 pF1KE2 KAFKVAYSLNGHEFD-FIHDVNKKHKEFVGNWNKNAVHVNLFETPVEAQYVRLYPTSCHT : :::: : ... : . ... : :: . .... : :. :. :.:.:. :: .. XP_016 TEFYVAYSSNQINWQIFKGNSTRNVMYFNGNSDASTIKENQFDPPIVARYIRISPTRAYN 1860 1870 1880 1890 1900 1910 220 230 240 250 260 270 pF1KE2 ACTLRFELLGCELNGCANPLGLKNNSIPDKQITASSSYKTW-GLHLFSWNPSYARLDKQG :::.:: :::.:::..:::..:..: .::::::: :.: : . :.: :::. :: XP_016 RPTLRLELQGCEVNGCSTPLGMENGKIENKQITASSFKKSWWGDY---WEPFRARLNAQG 1920 1930 1940 1950 1960 1970 280 290 300 310 320 330 pF1KE2 NFNAWVAGSYGNDQWLQIFPGNWDNHSHKKNLFETPILARYVRILPVAWHNRIALRLELL ::: : . .: :::.: XP_016 RVNAWQAKANNNKQWLEIDLLKIKKITAIITQGCKSLSSEMYVKSYTIHYSEQGVEWKPY 1980 1990 2000 2010 2020 2030 >>NP_000121 (OMIM: 188055,227400,600880,601367,612309,61 (2224 aa) initn: 599 init1: 240 opt: 574 Z-score: 550.1 bits: 112.9 E(85289): 6.7e-24 Smith-Waterman score: 574; 42.1% identity (67.1% similar) in 228 aa overlap (70-291:1907-2125) 40 50 60 70 80 90 pF1KE2 EISQEVRGDVFPSYTCTCLKGYAGNHCETKCVEPLGMENGNIANSQIAASSVRVTFLGLQ : :.:. .: :..::: :: ::: NP_000 SKPGWWLLNTEVGENQRAGMQTPFLIMDRDCRMPMGLSTGIISDSQIKASE----FLG-- 1880 1890 1900 1910 1920 1930 100 110 120 130 140 150 pF1KE2 HWVPELARLNRAGMVNAWT----PSSNDDNPWIQVNLLRRMWVTGVVTQGASRLASHEYL .: :.::::: .: :::. . ..:::::.. ... .::. ::::.. . : NP_000 YWEPRLARLNNGGSYNAWSVEKLAAEFASKPWIQVDMQKEVIITGIQTQGAKHYLKSCYT 1940 1950 1960 1970 1980 1990 160 170 180 190 200 210 pF1KE2 KAFKVAYSLNGHEFD-FIHDVNKKHKEFVGNWNKNAVHVNLFETPVEAQYVRLYPTSCHT : :::: : ... : . ... : :: . .... : :. :. :.:.:. :: .. NP_000 TEFYVAYSSNQINWQIFKGNSTRNVMYFNGNSDASTIKENQFDPPIVARYIRISPTRAYN 2000 2010 2020 2030 2040 2050 220 230 240 250 260 270 pF1KE2 ACTLRFELLGCELNGCANPLGLKNNSIPDKQITASSSYKTW-GLHLFSWNPSYARLDKQG :::.:: :::.:::..:::..:..: .::::::: :.: : . :.: :::. :: NP_000 RPTLRLELQGCEVNGCSTPLGMENGKIENKQITASSFKKSWWGDY---WEPFRARLNAQG 2060 2070 2080 2090 2100 280 290 300 310 320 330 pF1KE2 NFNAWVAGSYGNDQWLQIFPGNWDNHSHKKNLFETPILARYVRILPVAWHNRIALRLELL ::: : . .: :::.: NP_000 RVNAWQAKANNNKQWLEIDLLKIKKITAIITQGCKSLSSEMYVKSYTIHYSEQGVEWKPY 2110 2120 2130 2140 2150 2160 335 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 20:45:59 2016 done: Mon Nov 7 20:46:00 2016 Total Scan time: 7.240 Total Display time: 0.000 Function used was FASTA [36.3.4 Apr, 2011]