FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE5130, 150 aa 1>>>pF1KE5130 150 - 150 aa - 150 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.5166+/-0.00026; mu= 13.0884+/- 0.016 mean_var=90.7402+/-17.848, 0's: 0 Z-trim(122.2): 193 B-trim: 342 in 1/57 Lambda= 0.134640 statistics sampled from 39744 (39942) to 39744 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.821), E-opt: 0.2 (0.468), width: 16 Scan time: 5.540 The best scores are: opt bits E(85289) XP_011520954 (OMIM: 608387) PREDICTED: zinc finger ( 285) 206 48.7 7.8e-06 NP_001333508 (OMIM: 601260) zinc finger protein wi ( 321) 205 48.6 9.8e-06 NP_001128127 (OMIM: 608387) zinc finger protein 21 ( 459) 206 48.9 1.1e-05 NP_004211 (OMIM: 608387) zinc finger protein 213 [ ( 459) 206 48.9 1.1e-05 NP_001333510 (OMIM: 601260) zinc finger protein wi ( 563) 205 48.8 1.5e-05 NP_003430 (OMIM: 601260) zinc finger protein with ( 563) 205 48.8 1.5e-05 XP_011514861 (OMIM: 601260) PREDICTED: zinc finger ( 563) 205 48.8 1.5e-05 NP_001253962 (OMIM: 194550) myeloid zinc finger 1 ( 290) 199 47.4 2e-05 XP_011525566 (OMIM: 194550) PREDICTED: myeloid zin ( 764) 203 48.5 2.4e-05 XP_005259261 (OMIM: 194550) PREDICTED: myeloid zin ( 775) 203 48.5 2.5e-05 NP_003413 (OMIM: 194550) myeloid zinc finger 1 iso ( 734) 199 47.7 4.1e-05 NP_932172 (OMIM: 194550) myeloid zinc finger 1 iso ( 734) 199 47.7 4.1e-05 XP_011513113 (OMIM: 610794) PREDICTED: zinc finger ( 406) 194 46.5 5.1e-05 XP_011513115 (OMIM: 610794) PREDICTED: zinc finger ( 406) 194 46.5 5.1e-05 XP_011513109 (OMIM: 610794) PREDICTED: zinc finger ( 406) 194 46.5 5.1e-05 XP_005249353 (OMIM: 610794) PREDICTED: zinc finger ( 406) 194 46.5 5.1e-05 NP_112161 (OMIM: 610794) zinc finger and SCAN doma ( 406) 194 46.5 5.1e-05 NP_665916 (OMIM: 610794) zinc finger and SCAN doma ( 406) 194 46.5 5.1e-05 XP_011513110 (OMIM: 610794) PREDICTED: zinc finger ( 406) 194 46.5 5.1e-05 NP_001230170 (OMIM: 610794) zinc finger and SCAN d ( 406) 194 46.5 5.1e-05 XP_011513111 (OMIM: 610794) PREDICTED: zinc finger ( 406) 194 46.5 5.1e-05 NP_001128688 (OMIM: 610794) zinc finger and SCAN d ( 406) 194 46.5 5.1e-05 XP_005249352 (OMIM: 610794) PREDICTED: zinc finger ( 406) 194 46.5 5.1e-05 XP_016866685 (OMIM: 610794) PREDICTED: zinc finger ( 406) 194 46.5 5.1e-05 NP_001128687 (OMIM: 610794) zinc finger and SCAN d ( 406) 194 46.5 5.1e-05 XP_011513114 (OMIM: 610794) PREDICTED: zinc finger ( 406) 194 46.5 5.1e-05 NP_001333509 (OMIM: 601260) zinc finger protein wi ( 527) 194 46.6 6.2e-05 NP_001273983 (OMIM: 601260) zinc finger protein wi ( 527) 194 46.6 6.2e-05 NP_001295052 (OMIM: 194534) zinc finger protein 24 ( 193) 186 44.7 8.7e-05 NP_443155 (OMIM: 615254) SCAN domain-containing pr (1325) 196 47.4 9.4e-05 XP_005258398 (OMIM: 194534) PREDICTED: zinc finger ( 368) 186 44.9 0.00014 NP_008896 (OMIM: 194534) zinc finger protein 24 is ( 368) 186 44.9 0.00014 XP_016866755 (OMIM: 602240) PREDICTED: zinc finger ( 578) 186 45.1 0.0002 NP_001265048 (OMIM: 602240) zinc finger protein wi ( 578) 186 45.1 0.0002 NP_006289 (OMIM: 602240) zinc finger protein with ( 578) 186 45.1 0.0002 XP_011513172 (OMIM: 602240) PREDICTED: zinc finger ( 578) 186 45.1 0.0002 XP_016867413 (OMIM: 611272) PREDICTED: zinc finger ( 766) 185 45.0 0.00028 XP_016867412 (OMIM: 611272) PREDICTED: zinc finger ( 766) 185 45.0 0.00028 NP_001305012 (OMIM: 611272) zinc finger protein wi ( 766) 185 45.0 0.00028 XP_016867409 (OMIM: 611272) PREDICTED: zinc finger ( 838) 185 45.0 0.00029 XP_016867410 (OMIM: 611272) PREDICTED: zinc finger ( 838) 185 45.0 0.00029 XP_016867411 (OMIM: 611272) PREDICTED: zinc finger ( 838) 185 45.0 0.00029 XP_016867407 (OMIM: 611272) PREDICTED: zinc finger ( 839) 185 45.0 0.0003 NP_001305011 (OMIM: 611272) zinc finger protein wi ( 839) 185 45.0 0.0003 NP_659570 (OMIM: 611272) zinc finger protein with ( 839) 185 45.0 0.0003 XP_016867408 (OMIM: 611272) PREDICTED: zinc finger ( 839) 185 45.0 0.0003 NP_055384 (OMIM: 611272) zinc finger protein with ( 839) 185 45.0 0.0003 NP_001027463 (OMIM: 603900) zinc finger protein 17 ( 234) 177 43.0 0.00034 NP_003441 (OMIM: 603900) zinc finger protein 174 i ( 407) 177 43.2 0.00051 NP_115723 (OMIM: 609601) zinc finger protein 397 i ( 275) 174 42.5 0.00057 >>XP_011520954 (OMIM: 608387) PREDICTED: zinc finger pro (285 aa) initn: 353 init1: 144 opt: 206 Z-score: 225.7 bits: 48.7 E(85289): 7.8e-06 Smith-Waterman score: 283; 42.0% identity (67.2% similar) in 131 aa overlap (9-130:1-125) 10 20 30 40 50 60 pF1KE5 MMAADIPRVTTPLSSLVQVPQEEDRQEEEVTTMILEDDSWVQEAVLQEDGPESEPFPQSA ...:: . :.: : : . . .::.:: ::.. .::: .:: : XP_011 MAAPLEAQDQAPGEG----EGLLIVKVEDSSWEQESAQHEDGRDSEACRQRF 10 20 30 40 70 80 90 100 110 pF1KE5 GKGGPQEEVTRGPQGALGRLRELCRRWLRPEVHTKEQML---------TMLPKEIQAWLQ . . ..::. :...: ::: ::::::..::::.: :.:: :::.:.. XP_011 RQFCYGD--VHGPHEAFSQLWELCCRWLRPELRTKEQILELLVLEQFLTVLPGEIQGWVR 50 60 70 80 90 100 120 130 140 150 pF1KE5 EHRPESSEEAAALVEDLTQTLQDSAVAVFASLPVEVTSL :..: :.:::.:::::: . XP_011 EQHPGSGEEAVALVEDLQKQPVKAWRQDVPSEEAEPEAAGRGSQATGPPPTVGARRRPSV 110 120 130 140 150 160 >>NP_001333508 (OMIM: 601260) zinc finger protein with K (321 aa) initn: 301 init1: 163 opt: 205 Z-score: 224.0 bits: 48.6 E(85289): 9.8e-06 Smith-Waterman score: 313; 43.4% identity (65.1% similar) in 152 aa overlap (1-137:1-143) 10 20 30 40 50 pF1KE5 MMAADIPRVTTPLSSLVQVPQEED-----RQEEEVTTMILEDDSWVQEAVLQEDGP-ESE ::.:. : .: :: :. ::.: . ::: :: : :...::. : . : NP_001 MMTAE-SREATGLSP--QAAQEKDGIVIVKVEEEDE----EDHMWGQDSTLQDTPPPDPE 10 20 30 40 50 60 70 80 90 100 pF1KE5 PFPQSAGKGGPQEEVTRGPQGALGRLRELCRRWLRPEVHTKEQML---------TMLPKE : : . :. : ::. ::.::.:::..:::::..::::.: ..:::: NP_001 IFRQRFRRFCYQN--TFGPREALSRLKELCHQWLRPEINTKEQILELLVLEQFLSILPKE 60 70 80 90 100 110 110 120 130 140 150 pF1KE5 IQAWLQEHRPESSEEAAALVEDLTQTLQDSAVAVFASLPVEVTSL .:.::::.::.:.:::..:.::: :. . : NP_001 LQVWLQEYRPDSGEEAVTLLEDLELDLSGQQVPGQVHGPEMLARGMVPLDPVQESSSFDL 120 130 140 150 160 170 NP_001 HHEATQSHFKHSSRKPRLLQSRALPAAHIPAPPHEGSPRDQAMASALFTADSQAMVKIED 180 190 200 210 220 230 >>NP_001128127 (OMIM: 608387) zinc finger protein 213 [H (459 aa) initn: 353 init1: 144 opt: 206 Z-score: 222.9 bits: 48.9 E(85289): 1.1e-05 Smith-Waterman score: 283; 42.0% identity (67.2% similar) in 131 aa overlap (9-130:1-125) 10 20 30 40 50 60 pF1KE5 MMAADIPRVTTPLSSLVQVPQEEDRQEEEVTTMILEDDSWVQEAVLQEDGPESEPFPQSA ...:: . :.: : : . . .::.:: ::.. .::: .:: : NP_001 MAAPLEAQDQAPGEG----EGLLIVKVEDSSWEQESAQHEDGRDSEACRQRF 10 20 30 40 70 80 90 100 110 pF1KE5 GKGGPQEEVTRGPQGALGRLRELCRRWLRPEVHTKEQML---------TMLPKEIQAWLQ . . ..::. :...: ::: ::::::..::::.: :.:: :::.:.. NP_001 RQFCYGD--VHGPHEAFSQLWELCCRWLRPELRTKEQILELLVLEQFLTVLPGEIQGWVR 50 60 70 80 90 100 120 130 140 150 pF1KE5 EHRPESSEEAAALVEDLTQTLQDSAVAVFASLPVEVTSL :..: :.:::.:::::: . NP_001 EQHPGSGEEAVALVEDLQKQPVKAWRQDVPSEEAEPEAAGRGSQATGPPPTVGARRRPSV 110 120 130 140 150 160 >>NP_004211 (OMIM: 608387) zinc finger protein 213 [Homo (459 aa) initn: 353 init1: 144 opt: 206 Z-score: 222.9 bits: 48.9 E(85289): 1.1e-05 Smith-Waterman score: 283; 42.0% identity (67.2% similar) in 131 aa overlap (9-130:1-125) 10 20 30 40 50 60 pF1KE5 MMAADIPRVTTPLSSLVQVPQEEDRQEEEVTTMILEDDSWVQEAVLQEDGPESEPFPQSA ...:: . :.: : : . . .::.:: ::.. .::: .:: : NP_004 MAAPLEAQDQAPGEG----EGLLIVKVEDSSWEQESAQHEDGRDSEACRQRF 10 20 30 40 70 80 90 100 110 pF1KE5 GKGGPQEEVTRGPQGALGRLRELCRRWLRPEVHTKEQML---------TMLPKEIQAWLQ . . ..::. :...: ::: ::::::..::::.: :.:: :::.:.. NP_004 RQFCYGD--VHGPHEAFSQLWELCCRWLRPELRTKEQILELLVLEQFLTVLPGEIQGWVR 50 60 70 80 90 100 120 130 140 150 pF1KE5 EHRPESSEEAAALVEDLTQTLQDSAVAVFASLPVEVTSL :..: :.:::.:::::: . NP_004 EQHPGSGEEAVALVEDLQKQPVKAWRQDVPSEEAEPEAAGRGSQATGPPPTVGARRRPSV 110 120 130 140 150 160 >>NP_001333510 (OMIM: 601260) zinc finger protein with K (563 aa) initn: 301 init1: 163 opt: 205 Z-score: 220.7 bits: 48.8 E(85289): 1.5e-05 Smith-Waterman score: 313; 43.4% identity (65.1% similar) in 152 aa overlap (1-137:1-143) 10 20 30 40 50 pF1KE5 MMAADIPRVTTPLSSLVQVPQEED-----RQEEEVTTMILEDDSWVQEAVLQEDGP-ESE ::.:. : .: :: :. ::.: . ::: :: : :...::. : . : NP_001 MMTAE-SREATGLSP--QAAQEKDGIVIVKVEEEDE----EDHMWGQDSTLQDTPPPDPE 10 20 30 40 50 60 70 80 90 100 pF1KE5 PFPQSAGKGGPQEEVTRGPQGALGRLRELCRRWLRPEVHTKEQML---------TMLPKE : : . :. : ::. ::.::.:::..:::::..::::.: ..:::: NP_001 IFRQRFRRFCYQN--TFGPREALSRLKELCHQWLRPEINTKEQILELLVLEQFLSILPKE 60 70 80 90 100 110 110 120 130 140 150 pF1KE5 IQAWLQEHRPESSEEAAALVEDLTQTLQDSAVAVFASLPVEVTSL .:.::::.::.:.:::..:.::: :. . : NP_001 LQVWLQEYRPDSGEEAVTLLEDLELDLSGQQVPGQVHGPEMLARGMVPLDPVQESSSFDL 120 130 140 150 160 170 NP_001 HHEATQSHFKHSSRKPRLLQSRALPAAHIPAPPHEGSPRDQAMASALFTADSQAMVKIED 180 190 200 210 220 230 >>NP_003430 (OMIM: 601260) zinc finger protein with KRAB (563 aa) initn: 301 init1: 163 opt: 205 Z-score: 220.7 bits: 48.8 E(85289): 1.5e-05 Smith-Waterman score: 313; 43.4% identity (65.1% similar) in 152 aa overlap (1-137:1-143) 10 20 30 40 50 pF1KE5 MMAADIPRVTTPLSSLVQVPQEED-----RQEEEVTTMILEDDSWVQEAVLQEDGP-ESE ::.:. : .: :: :. ::.: . ::: :: : :...::. : . : NP_003 MMTAE-SREATGLSP--QAAQEKDGIVIVKVEEEDE----EDHMWGQDSTLQDTPPPDPE 10 20 30 40 50 60 70 80 90 100 pF1KE5 PFPQSAGKGGPQEEVTRGPQGALGRLRELCRRWLRPEVHTKEQML---------TMLPKE : : . :. : ::. ::.::.:::..:::::..::::.: ..:::: NP_003 IFRQRFRRFCYQN--TFGPREALSRLKELCHQWLRPEINTKEQILELLVLEQFLSILPKE 60 70 80 90 100 110 110 120 130 140 150 pF1KE5 IQAWLQEHRPESSEEAAALVEDLTQTLQDSAVAVFASLPVEVTSL .:.::::.::.:.:::..:.::: :. . : NP_003 LQVWLQEYRPDSGEEAVTLLEDLELDLSGQQVPGQVHGPEMLARGMVPLDPVQESSSFDL 120 130 140 150 160 170 NP_003 HHEATQSHFKHSSRKPRLLQSRALPAAHIPAPPHEGSPRDQAMASALFTADSQAMVKIED 180 190 200 210 220 230 >>XP_011514861 (OMIM: 601260) PREDICTED: zinc finger pro (563 aa) initn: 301 init1: 163 opt: 205 Z-score: 220.7 bits: 48.8 E(85289): 1.5e-05 Smith-Waterman score: 313; 43.4% identity (65.1% similar) in 152 aa overlap (1-137:1-143) 10 20 30 40 50 pF1KE5 MMAADIPRVTTPLSSLVQVPQEED-----RQEEEVTTMILEDDSWVQEAVLQEDGP-ESE ::.:. : .: :: :. ::.: . ::: :: : :...::. : . : XP_011 MMTAE-SREATGLSP--QAAQEKDGIVIVKVEEEDE----EDHMWGQDSTLQDTPPPDPE 10 20 30 40 50 60 70 80 90 100 pF1KE5 PFPQSAGKGGPQEEVTRGPQGALGRLRELCRRWLRPEVHTKEQML---------TMLPKE : : . :. : ::. ::.::.:::..:::::..::::.: ..:::: XP_011 IFRQRFRRFCYQN--TFGPREALSRLKELCHQWLRPEINTKEQILELLVLEQFLSILPKE 60 70 80 90 100 110 110 120 130 140 150 pF1KE5 IQAWLQEHRPESSEEAAALVEDLTQTLQDSAVAVFASLPVEVTSL .:.::::.::.:.:::..:.::: :. . : XP_011 LQVWLQEYRPDSGEEAVTLLEDLELDLSGQQVPGQVHGPEMLARGMVPLDPVQESSSFDL 120 130 140 150 160 170 XP_011 HHEATQSHFKHSSRKPRLLQSRALPAAHIPAPPHEGSPRDQAMASALFTADSQAMVKIED 180 190 200 210 220 230 >>NP_001253962 (OMIM: 194550) myeloid zinc finger 1 isof (290 aa) initn: 322 init1: 165 opt: 199 Z-score: 218.2 bits: 47.4 E(85289): 2e-05 Smith-Waterman score: 267; 49.1% identity (66.1% similar) in 112 aa overlap (27-128:15-122) 10 20 30 40 50 pF1KE5 MMAADIPRVTTPLSSLVQVPQEEDRQEEEVTTMI-LEDDSWVQEAVLQEDGPESEPFPQS :.: .:. :::. ::.: . :::. . NP_001 MRPAVLGSPDRAPPEDEGPVMVKLEDSEEEGEAALWDPGPEAARLRFR 10 20 30 40 60 70 80 90 100 110 pF1KE5 AGKGGPQEEVTRGPQGALGRLRELCRRWLRPEVHTKEQMLTML---------PKEIQAWL . ::.: ::: ::..::::::.::::::..::::: .: : :::: . NP_001 CFR---YEEAT-GPQEALAQLRELCRQWLRPEVRSKEQMLELLVLEQFLGALPPEIQARV 50 60 70 80 90 100 120 130 140 150 pF1KE5 QEHRPESSEEAAALVEDLTQTLQDSAVAVFASLPVEVTSL : .:: : :::::::. : NP_001 QGQRPGSPEEAAALVDGLRREPGGPRRWVTVQVQGQEVLSEKMEPSSFQPLPETEPPTPE 110 120 130 140 150 160 >>XP_011525566 (OMIM: 194550) PREDICTED: myeloid zinc fi (764 aa) initn: 304 init1: 165 opt: 203 Z-score: 216.8 bits: 48.5 E(85289): 2.4e-05 Smith-Waterman score: 271; 43.6% identity (61.7% similar) in 133 aa overlap (6-128:24-152) 10 20 30 40 pF1KE5 MMAADIPRVTTPLSSLVQVPQEEDRQEEEVTTMI-LEDDSWV :: .. . : .. :.: .:. :::. XP_011 MPTHGFEAGSMGRSGQEGRHWPQIPDLVPSMRPAVLGSPDRAPPEDEGPVMVKLEDSEEE 10 20 30 40 50 60 50 60 70 80 90 100 pF1KE5 QEAVLQEDGPESEPFPQSAGKGGPQEEVTRGPQGALGRLRELCRRWLRPEVHTKEQMLTM ::.: . :::. . . ::.: ::: ::..::::::.::::::..::::: . XP_011 GEAALWDPGPEAARLRFRCFR---YEEAT-GPQEALAQLRELCRQWLRPEVRSKEQMLEL 70 80 90 100 110 110 120 130 140 150 pF1KE5 L---------PKEIQAWLQEHRPESSEEAAALVEDLTQTLQDSAVAVFASLPVEVTSL : : :::: .: .:: : :::::::. : XP_011 LVLEQFLGALPPEIQARVQGQRPGSPEEAAALVDGLRREPGGPRRWVTVQVQGQEVLSEK 120 130 140 150 160 170 XP_011 MEPSSFQPLPETEPPTPEPGPKTPPRTMQESPLGLQVKEESEVTEDSDFLESGPLAATQE 180 190 200 210 220 230 >>XP_005259261 (OMIM: 194550) PREDICTED: myeloid zinc fi (775 aa) initn: 304 init1: 165 opt: 203 Z-score: 216.8 bits: 48.5 E(85289): 2.5e-05 Smith-Waterman score: 271; 43.6% identity (61.7% similar) in 133 aa overlap (6-128:35-163) 10 20 30 pF1KE5 MMAADIPRVTTPLSSLVQVPQEEDRQEEEVTTMI- :: .. . : .. :.: .:. XP_005 CHPLHKRRFLPKAAAAEGTARGGRGRHWPQIPDLVPSMRPAVLGSPDRAPPEDEGPVMVK 10 20 30 40 50 60 40 50 60 70 80 90 pF1KE5 LEDDSWVQEAVLQEDGPESEPFPQSAGKGGPQEEVTRGPQGALGRLRELCRRWLRPEVHT :::. ::.: . :::. . . ::.: ::: ::..::::::.::::::.. XP_005 LEDSEEEGEAALWDPGPEAARLRFRCFR---YEEAT-GPQEALAQLRELCRQWLRPEVRS 70 80 90 100 110 120 100 110 120 130 140 pF1KE5 KEQMLTML---------PKEIQAWLQEHRPESSEEAAALVEDLTQTLQDSAVAVFASLPV ::::: .: : :::: .: .:: : :::::::. : XP_005 KEQMLELLVLEQFLGALPPEIQARVQGQRPGSPEEAAALVDGLRREPGGPRRWVTVQVQG 130 140 150 160 170 180 150 pF1KE5 EVTSL XP_005 QEVLSEKMEPSSFQPLPETEPPTPEPGPKTPPRTMQESPLGLQVKEESEVTEDSDFLESG 190 200 210 220 230 240 150 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 21:39:57 2016 done: Mon Nov 7 21:39:58 2016 Total Scan time: 5.540 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]