FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE3964, 305 aa 1>>>pF1KE3964 305 - 305 aa - 305 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.7788+/-0.000624; mu= 8.4571+/- 0.038 mean_var=206.2379+/-44.761, 0's: 0 Z-trim(110.4): 467 B-trim: 424 in 1/51 Lambda= 0.089308 statistics sampled from 18175 (18774) to 18175 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.578), E-opt: 0.2 (0.22), width: 16 Scan time: 7.030 The best scores are: opt bits E(85289) XP_011520396 (OMIM: 609540) PREDICTED: WD repeat-c ( 305) 2061 279.0 8.3e-75 NP_001290176 (OMIM: 609540) WD repeat-containing p ( 305) 2061 279.0 8.3e-75 NP_079510 (OMIM: 609540) WD repeat-containing prot ( 305) 2061 279.0 8.3e-75 XP_016878126 (OMIM: 609540) PREDICTED: WD repeat-c ( 270) 1666 228.0 1.6e-59 NP_001290177 (OMIM: 609540) WD repeat-containing p ( 212) 1343 186.3 4.7e-47 NP_438172 (OMIM: 609012) WD repeat-containing prot ( 334) 393 64.1 4.3e-10 NP_060058 (OMIM: 609012) WD repeat-containing prot ( 334) 393 64.1 4.3e-10 XP_005272220 (OMIM: 609012) PREDICTED: WD repeat-c ( 334) 393 64.1 4.3e-10 XP_011531865 (OMIM: 614783,614813) PREDICTED: POC1 ( 246) 377 61.9 1.5e-09 XP_011531866 (OMIM: 614783,614813) PREDICTED: POC1 ( 246) 377 61.9 1.5e-09 XP_011531867 (OMIM: 614783,614813) PREDICTED: POC1 ( 246) 377 61.9 1.5e-09 XP_011531864 (OMIM: 614783,614813) PREDICTED: POC1 ( 300) 377 62.0 1.7e-09 XP_011531863 (OMIM: 614783,614813) PREDICTED: POC1 ( 326) 377 62.0 1.8e-09 NP_001155052 (OMIM: 614783,614813) POC1 centriolar ( 359) 377 62.1 1.9e-09 XP_011531862 (OMIM: 614783,614813) PREDICTED: POC1 ( 374) 377 62.1 1.9e-09 NP_056241 (OMIM: 614783,614813) POC1 centriolar pr ( 407) 377 62.2 2e-09 XP_016878353 (OMIM: 602703,616212) PREDICTED: kata ( 655) 369 61.4 5.5e-09 XP_016878352 (OMIM: 602703,616212) PREDICTED: kata ( 655) 369 61.4 5.5e-09 NP_005877 (OMIM: 602703,616212) katanin p80 WD40 r ( 655) 369 61.4 5.5e-09 XP_006721186 (OMIM: 602703,616212) PREDICTED: kata ( 658) 369 61.4 5.6e-09 XP_016878350 (OMIM: 602703,616212) PREDICTED: kata ( 672) 369 61.4 5.6e-09 XP_016878351 (OMIM: 602703,616212) PREDICTED: kata ( 672) 369 61.4 5.6e-09 XP_005255829 (OMIM: 602703,616212) PREDICTED: kata ( 672) 369 61.4 5.6e-09 XP_006721184 (OMIM: 602703,616212) PREDICTED: kata ( 675) 369 61.4 5.6e-09 XP_011521112 (OMIM: 602703,616212) PREDICTED: kata ( 675) 369 61.4 5.6e-09 XP_016878349 (OMIM: 602703,616212) PREDICTED: kata ( 675) 369 61.4 5.6e-09 XP_006721185 (OMIM: 602703,616212) PREDICTED: kata ( 675) 369 61.4 5.6e-09 NP_758440 (OMIM: 614784,615973) POC1 centriolar pr ( 478) 363 60.5 7.8e-09 NP_008882 (OMIM: 601787) transcription initiation ( 800) 361 60.5 1.3e-08 XP_016861593 (OMIM: 614783,614813) PREDICTED: POC1 ( 321) 344 57.8 3.4e-08 XP_016856550 (OMIM: 139380,613065,616973) PREDICTE ( 340) 344 57.8 3.5e-08 NP_001269468 (OMIM: 139380,613065,616973) guanine ( 340) 344 57.8 3.5e-08 XP_016856549 (OMIM: 139380,613065,616973) PREDICTE ( 340) 344 57.8 3.5e-08 XP_016856548 (OMIM: 139380,613065,616973) PREDICTE ( 340) 344 57.8 3.5e-08 NP_002065 (OMIM: 139380,613065,616973) guanine nuc ( 340) 344 57.8 3.5e-08 NP_001155053 (OMIM: 614783,614813) POC1 centriolar ( 369) 344 57.9 3.7e-08 NP_001186706 (OMIM: 614784,615973) POC1 centriolar ( 436) 339 57.3 6.3e-08 NP_005264 (OMIM: 139390) guanine nucleotide-bindin ( 340) 337 56.9 6.5e-08 XP_016880191 (OMIM: 601545,607432) PREDICTED: plat ( 345) 334 56.5 8.6e-08 XP_016880188 (OMIM: 601545,607432) PREDICTED: plat ( 410) 334 56.6 9.5e-08 NP_000421 (OMIM: 601545,607432) platelet-activatin ( 410) 334 56.6 9.5e-08 XP_016880189 (OMIM: 601545,607432) PREDICTED: plat ( 410) 334 56.6 9.5e-08 XP_016880190 (OMIM: 601545,607432) PREDICTED: plat ( 410) 334 56.6 9.5e-08 XP_011522205 (OMIM: 601545,607432) PREDICTED: plat ( 428) 334 56.7 9.8e-08 XP_011522203 (OMIM: 601545,607432) PREDICTED: plat ( 428) 334 56.7 9.8e-08 XP_011522204 (OMIM: 601545,607432) PREDICTED: plat ( 428) 334 56.7 9.8e-08 XP_011530390 (OMIM: 606278) PREDICTED: F-box/WD re ( 540) 328 56.0 1.9e-07 NP_001013433 (OMIM: 606278) F-box/WD repeat-contai ( 589) 328 56.1 2e-07 NP_060785 (OMIM: 606278) F-box/WD repeat-containin ( 627) 328 56.1 2.1e-07 XP_011530388 (OMIM: 606278) PREDICTED: F-box/WD re ( 679) 328 56.2 2.2e-07 >>XP_011520396 (OMIM: 609540) PREDICTED: WD repeat-conta (305 aa) initn: 2061 init1: 2061 opt: 2061 Z-score: 1464.0 bits: 279.0 E(85289): 8.3e-75 Smith-Waterman score: 2061; 100.0% identity (100.0% similar) in 305 aa overlap (1-305:1-305) 10 20 30 40 50 60 pF1KE3 MTNQYGILFKQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 MTNQYGILFKQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSL 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 EGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 EGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQY 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 LATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 LATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATG 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 KLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 KLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAF 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE3 CPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 CPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHI 250 260 270 280 290 300 pF1KE3 YDCPI ::::: XP_011 YDCPI >>NP_001290176 (OMIM: 609540) WD repeat-containing prote (305 aa) initn: 2061 init1: 2061 opt: 2061 Z-score: 1464.0 bits: 279.0 E(85289): 8.3e-75 Smith-Waterman score: 2061; 100.0% identity (100.0% similar) in 305 aa overlap (1-305:1-305) 10 20 30 40 50 60 pF1KE3 MTNQYGILFKQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MTNQYGILFKQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSL 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 EGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 EGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQY 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 LATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 LATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATG 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 KLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 KLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAF 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE3 CPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 CPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHI 250 260 270 280 290 300 pF1KE3 YDCPI ::::: NP_001 YDCPI >>NP_079510 (OMIM: 609540) WD repeat-containing protein (305 aa) initn: 2061 init1: 2061 opt: 2061 Z-score: 1464.0 bits: 279.0 E(85289): 8.3e-75 Smith-Waterman score: 2061; 100.0% identity (100.0% similar) in 305 aa overlap (1-305:1-305) 10 20 30 40 50 60 pF1KE3 MTNQYGILFKQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_079 MTNQYGILFKQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSL 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 EGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_079 EGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQY 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 LATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_079 LATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATG 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 KLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_079 KLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAF 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE3 CPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_079 CPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHI 250 260 270 280 290 300 pF1KE3 YDCPI ::::: NP_079 YDCPI >>XP_016878126 (OMIM: 609540) PREDICTED: WD repeat-conta (270 aa) initn: 1851 init1: 1664 opt: 1666 Z-score: 1189.6 bits: 228.0 E(85289): 1.6e-59 Smith-Waterman score: 1666; 97.3% identity (97.7% similar) in 259 aa overlap (1-259:1-259) 10 20 30 40 50 60 pF1KE3 MTNQYGILFKQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 MTNQYGILFKQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSL 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 EGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 EGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQY 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 LATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 LATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATG 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 KLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 KLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAF 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE3 CPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHI ::::::::: :. : : XP_016 CPDDTHFVSRSQCWSGLGWPRQLESRRWTT 250 260 270 >>NP_001290177 (OMIM: 609540) WD repeat-containing prote (212 aa) initn: 1415 init1: 1343 opt: 1343 Z-score: 965.8 bits: 186.3 E(85289): 4.7e-47 Smith-Waterman score: 1343; 100.0% identity (100.0% similar) in 199 aa overlap (107-305:14-212) 80 90 100 110 120 130 pF1KE3 PIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVE :::::::::::::::::::::::::::::: NP_001 MTNQYGILFKQEQVDAWTLAFSPDSQYLATGTHVGKVNIFGVE 10 20 30 40 140 150 160 170 180 190 pF1KE3 SGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 SGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSL 50 60 70 80 90 100 200 210 220 230 240 250 pF1KE3 TFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 TFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSV 110 120 130 140 150 160 260 270 280 290 300 pF1KE3 KVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYDCPI ::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 KVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYDCPI 170 180 190 200 210 >>NP_438172 (OMIM: 609012) WD repeat-containing protein (334 aa) initn: 618 init1: 376 opt: 393 Z-score: 302.1 bits: 64.1 E(85289): 4.3e-10 Smith-Waterman score: 393; 39.5% identity (72.8% similar) in 162 aa overlap (141-302:38-199) 120 130 140 150 160 170 pF1KE3 TLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDG ...: . : . :. .::.:..:::.. : NP_438 PETEAARAQPTPSSSATQSKPTPVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADK 10 20 30 40 50 60 180 190 200 210 220 230 pF1KE3 IINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSG .:.:. ::. .:. :: . : ....: ::.:::.:::: .::.::. .. ::.: NP_438 LIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKG 70 80 90 100 110 120 240 250 260 270 280 290 pF1KE3 HASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIV :...:. : :... .::.: :.::..::: : :..:. :.: : .:..: .:: :: NP_438 HSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIV 130 140 150 160 170 180 300 pF1KE3 SVGDDQEIHIYDCPI : . : .:.: NP_438 SSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGK 190 200 210 220 230 240 >>NP_060058 (OMIM: 609012) WD repeat-containing protein (334 aa) initn: 618 init1: 376 opt: 393 Z-score: 302.1 bits: 64.1 E(85289): 4.3e-10 Smith-Waterman score: 393; 39.5% identity (72.8% similar) in 162 aa overlap (141-302:38-199) 120 130 140 150 160 170 pF1KE3 TLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDG ...: . : . :. .::.:..:::.. : NP_060 PETEAARAQPTPSSSATQSKPTPVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADK 10 20 30 40 50 60 180 190 200 210 220 230 pF1KE3 IINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSG .:.:. ::. .:. :: . : ....: ::.:::.:::: .::.::. .. ::.: NP_060 LIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKG 70 80 90 100 110 120 240 250 260 270 280 290 pF1KE3 HASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIV :...:. : :... .::.: :.::..::: : :..:. :.: : .:..: .:: :: NP_060 HSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIV 130 140 150 160 170 180 300 pF1KE3 SVGDDQEIHIYDCPI : . : .:.: NP_060 SSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGK 190 200 210 220 230 240 >>XP_005272220 (OMIM: 609012) PREDICTED: WD repeat-conta (334 aa) initn: 618 init1: 376 opt: 393 Z-score: 302.1 bits: 64.1 E(85289): 4.3e-10 Smith-Waterman score: 393; 39.5% identity (72.8% similar) in 162 aa overlap (141-302:38-199) 120 130 140 150 160 170 pF1KE3 TLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDG ...: . : . :. .::.:..:::.. : XP_005 PETEAARAQPTPSSSATQSKPTPVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADK 10 20 30 40 50 60 180 190 200 210 220 230 pF1KE3 IINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSG .:.:. ::. .:. :: . : ....: ::.:::.:::: .::.::. .. ::.: XP_005 LIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKG 70 80 90 100 110 120 240 250 260 270 280 290 pF1KE3 HASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIV :...:. : :... .::.: :.::..::: : :..:. :.: : .:..: .:: :: XP_005 HSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIV 130 140 150 160 170 180 300 pF1KE3 SVGDDQEIHIYDCPI : . : .:.: XP_005 SSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGK 190 200 210 220 230 240 >>XP_011531865 (OMIM: 614783,614813) PREDICTED: POC1 cen (246 aa) initn: 725 init1: 330 opt: 377 Z-score: 292.4 bits: 61.9 E(85289): 1.5e-09 Smith-Waterman score: 377; 30.7% identity (64.3% similar) in 199 aa overlap (105-302:17-215) 80 90 100 110 120 130 pF1KE3 TLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWT-LAFSPDSQYLATGTHVGKVNIF : :: : . :: ... ::.:. . . .. XP_011 MAAPCAEDPSLERHFKGHRDAVTCVDFSINTKQLASGSMDSCLMVW 10 20 30 40 140 150 160 170 180 190 pF1KE3 GVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPI .. .. : . . . . .::.:. ::::. : . :. . ....:. . XP_011 HMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATV 50 60 70 80 90 100 200 210 220 230 240 250 pF1KE3 RSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSD ::. : :.: .:::::: .:.. ... .. .:: : .:: . : :: .::.:.: XP_011 RSVHFCSDGQSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDD 110 120 130 140 150 160 260 270 280 290 300 pF1KE3 KSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYDCPI :.::.:: ..: :::.. .: : : .. .:. :...: :. ....: XP_011 KTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQ 170 180 190 200 210 220 XP_011 WTSHHCCLFKNGGVFCFWRL 230 240 >>XP_011531866 (OMIM: 614783,614813) PREDICTED: POC1 cen (246 aa) initn: 725 init1: 330 opt: 377 Z-score: 292.4 bits: 61.9 E(85289): 1.5e-09 Smith-Waterman score: 377; 30.7% identity (64.3% similar) in 199 aa overlap (105-302:17-215) 80 90 100 110 120 130 pF1KE3 TLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWT-LAFSPDSQYLATGTHVGKVNIF : :: : . :: ... ::.:. . . .. XP_011 MAAPCAEDPSLERHFKGHRDAVTCVDFSINTKQLASGSMDSCLMVW 10 20 30 40 140 150 160 170 180 190 pF1KE3 GVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPI .. .. : . . . . .::.:. ::::. : . :. . ....:. . XP_011 HMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATV 50 60 70 80 90 100 200 210 220 230 240 250 pF1KE3 RSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSD ::. : :.: .:::::: .:.. ... .. .:: : .:: . : :: .::.:.: XP_011 RSVHFCSDGQSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDD 110 120 130 140 150 160 260 270 280 290 300 pF1KE3 KSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYDCPI :.::.:: ..: :::.. .: : : .. .:. :...: :. ....: XP_011 KTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQ 170 180 190 200 210 220 XP_011 WTSHHCCLFKNGGVFCFWRL 230 240 305 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 08:30:42 2016 done: Sun Nov 6 08:30:43 2016 Total Scan time: 7.030 Total Display time: 0.000 Function used was FASTA [36.3.4 Apr, 2011]