FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE3171, 403 aa 1>>>pF1KE3171 403 - 403 aa - 403 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.1299+/-0.000869; mu= 17.3698+/- 0.052 mean_var=59.4759+/-12.075, 0's: 0 Z-trim(104.4): 19 B-trim: 8 in 1/50 Lambda= 0.166304 statistics sampled from 7866 (7873) to 7866 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.609), E-opt: 0.2 (0.242), width: 16 Scan time: 2.830 The best scores are: opt bits E(32554) CCDS10287.1 FBXO22 gene_id:26263|Hs108|chr15 ( 403) 2680 651.6 3.6e-187 CCDS45310.1 FBXO22 gene_id:26263|Hs108|chr15 ( 276) 1759 430.6 8.7e-121 >>CCDS10287.1 FBXO22 gene_id:26263|Hs108|chr15 (403 aa) initn: 2680 init1: 2680 opt: 2680 Z-score: 3473.7 bits: 651.6 E(32554): 3.6e-187 Smith-Waterman score: 2680; 100.0% identity (100.0% similar) in 403 aa overlap (1-403:1-403) 10 20 30 40 50 60 pF1KE3 MEPVGCCGECRGSSVDPRSTFVLSNLAEVVERVLTFLPAKALLRVACVCRLWRECVRRVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 MEPVGCCGECRGSSVDPRSTFVLSNLAEVVERVLTFLPAKALLRVACVCRLWRECVRRVL 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 RTHRSVTWISAGLAEAGHLEGHCLVRVVAEELENVRILPHTVLYMADSETFISLEECRGH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 RTHRSVTWISAGLAEAGHLEGHCLVRVVAEELENVRILPHTVLYMADSETFISLEECRGH 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 KRARKRTSMETALALEKLFPKQCQVLGIVTPGIVVTPMGSGSNRPQEIEIGESGFALLFP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 KRARKRTSMETALALEKLFPKQCQVLGIVTPGIVVTPMGSGSNRPQEIEIGESGFALLFP 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 QIEGIKIQPFHFIKDPKNLTLERHQLTEVGLLDNPELRVVLVFGYNCCKVGASNYLQQVV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 QIEGIKIQPFHFIKDPKNLTLERHQLTEVGLLDNPELRVVLVFGYNCCKVGASNYLQQVV 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE3 STFSDMNIILAGGQVDNLSSLTSEKNPLDIDASGVVGLSFSGHRIQSATVLLNEDVSDEK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 STFSDMNIILAGGQVDNLSSLTSEKNPLDIDASGVVGLSFSGHRIQSATVLLNEDVSDEK 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE3 TAEAAMQRLKAANIPEHNTIGFMFACVGRGFQYYRAKGNVEADAFRKFFPSVPLFGFFGN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 TAEAAMQRLKAANIPEHNTIGFMFACVGRGFQYYRAKGNVEADAFRKFFPSVPLFGFFGN 310 320 330 340 350 360 370 380 390 400 pF1KE3 GEIGCDRIVTGNFILRKCNEVKDDDLFHSYTTIMALIHLGSSK ::::::::::::::::::::::::::::::::::::::::::: CCDS10 GEIGCDRIVTGNFILRKCNEVKDDDLFHSYTTIMALIHLGSSK 370 380 390 400 >>CCDS45310.1 FBXO22 gene_id:26263|Hs108|chr15 (276 aa) initn: 1759 init1: 1759 opt: 1759 Z-score: 2282.0 bits: 430.6 E(32554): 8.7e-121 Smith-Waterman score: 1759; 100.0% identity (100.0% similar) in 265 aa overlap (1-265:1-265) 10 20 30 40 50 60 pF1KE3 MEPVGCCGECRGSSVDPRSTFVLSNLAEVVERVLTFLPAKALLRVACVCRLWRECVRRVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 MEPVGCCGECRGSSVDPRSTFVLSNLAEVVERVLTFLPAKALLRVACVCRLWRECVRRVL 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 RTHRSVTWISAGLAEAGHLEGHCLVRVVAEELENVRILPHTVLYMADSETFISLEECRGH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 RTHRSVTWISAGLAEAGHLEGHCLVRVVAEELENVRILPHTVLYMADSETFISLEECRGH 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 KRARKRTSMETALALEKLFPKQCQVLGIVTPGIVVTPMGSGSNRPQEIEIGESGFALLFP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 KRARKRTSMETALALEKLFPKQCQVLGIVTPGIVVTPMGSGSNRPQEIEIGESGFALLFP 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 QIEGIKIQPFHFIKDPKNLTLERHQLTEVGLLDNPELRVVLVFGYNCCKVGASNYLQQVV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 QIEGIKIQPFHFIKDPKNLTLERHQLTEVGLLDNPELRVVLVFGYNCCKVGASNYLQQVV 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE3 STFSDMNIILAGGQVDNLSSLTSEKNPLDIDASGVVGLSFSGHRIQSATVLLNEDVSDEK ::::::::::::::::::::::::: CCDS45 STFSDMNIILAGGQVDNLSSLTSEKYVLCASDFVCE 250 260 270 403 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 14:10:36 2016 done: Sun Nov 6 14:10:36 2016 Total Scan time: 2.830 Total Display time: 0.000 Function used was FASTA [36.3.4 Apr, 2011]