FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE3156, 375 aa 1>>>pF1KE3156 375 - 375 aa - 375 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 7.2388+/-0.000364; mu= 8.8099+/- 0.023 mean_var=146.5691+/-28.391, 0's: 0 Z-trim(119.3): 17 B-trim: 1227 in 2/55 Lambda= 0.105938 statistics sampled from 33196 (33214) to 33196 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.746), E-opt: 0.2 (0.389), width: 16 Scan time: 9.580 The best scores are: opt bits E(85289) NP_775740 (OMIM: 612501) ubiquitin-conjugating enz ( 375) 2504 394.1 2.8e-109 NP_001138807 (OMIM: 612501) ubiquitin-conjugating ( 359) 2086 330.2 4.6e-90 XP_005254844 (OMIM: 612501) PREDICTED: ubiquitin-c ( 314) 1976 313.3 4.8e-85 NP_001271311 (OMIM: 612501) ubiquitin-conjugating ( 340) 1614 258.0 2.3e-68 XP_016878215 (OMIM: 612501) PREDICTED: ubiquitin-c ( 298) 1558 249.4 7.8e-66 XP_011520530 (OMIM: 612501) PREDICTED: ubiquitin-c ( 198) 1316 212.3 7.8e-55 XP_006720833 (OMIM: 612501) PREDICTED: ubiquitin-c ( 235) 1316 212.4 8.9e-55 XP_005254845 (OMIM: 612501) PREDICTED: ubiquitin-c ( 296) 1316 212.4 1.1e-54 XP_016878216 (OMIM: 612501) PREDICTED: ubiquitin-c ( 279) 1086 177.3 3.9e-44 XP_016878217 (OMIM: 612501) PREDICTED: ubiquitin-c ( 261) 686 116.1 9.3e-26 NP_001138633 (OMIM: 615832) ubiquitin-conjugating ( 161) 566 97.6 2.1e-20 >>NP_775740 (OMIM: 612501) ubiquitin-conjugating enzyme (375 aa) initn: 2504 init1: 2504 opt: 2504 Z-score: 2082.9 bits: 394.1 E(85289): 2.8e-109 Smith-Waterman score: 2504; 100.0% identity (100.0% similar) in 375 aa overlap (1-375:1-375) 10 20 30 40 50 60 pF1KE3 MSVSGLKAELKFLASIFDKNHERFRIVSWKLDELHCQFLVPQQGSPHSLPPPLTLHCNIT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_775 MSVSGLKAELKFLASIFDKNHERFRIVSWKLDELHCQFLVPQQGSPHSLPPPLTLHCNIT 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 ESYPSSSPIWFVDSEDPNLTSVLERLEDTKNNNLLRQQLKWLICELCSLYNLPKHLDVEM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_775 ESYPSSSPIWFVDSEDPNLTSVLERLEDTKNNNLLRQQLKWLICELCSLYNLPKHLDVEM 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 LDQPLPTGQNGTTEEVTSEEEEEEEEMAEDIEDLDHYEMKEEEPISGKKSEDEGIEKENL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_775 LDQPLPTGQNGTTEEVTSEEEEEEEEMAEDIEDLDHYEMKEEEPISGKKSEDEGIEKENL 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 AILEKIRKTQRQDHLNGAVSGSVQASDRLMKELRDIYRSQSYKTGIYSVELINDSLYDWH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_775 AILEKIRKTQRQDHLNGAVSGSVQASDRLMKELRDIYRSQSYKTGIYSVELINDSLYDWH 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE3 VKLQKVDPDSPLHSDLQILKEKEGIEYILLNFSFKDNFPFDPPFVRVVLPVLSGGYVLGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_775 VKLQKVDPDSPLHSDLQILKEKEGIEYILLNFSFKDNFPFDPPFVRVVLPVLSGGYVLGG 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE3 GALCMELLTKQGWSSAYSIESVIMQINATLVKGKARVQFGANKNQYNLARAQQSYNSIVQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_775 GALCMELLTKQGWSSAYSIESVIMQINATLVKGKARVQFGANKNQYNLARAQQSYNSIVQ 310 320 330 340 350 360 370 pF1KE3 IHEKNGWYTPPKEDG ::::::::::::::: NP_775 IHEKNGWYTPPKEDG 370 >>NP_001138807 (OMIM: 612501) ubiquitin-conjugating enzy (359 aa) initn: 2086 init1: 2086 opt: 2086 Z-score: 1737.9 bits: 330.2 E(85289): 4.6e-90 Smith-Waterman score: 2093; 90.0% identity (92.8% similar) in 361 aa overlap (25-375:2-359) 10 20 30 40 50 60 pF1KE3 MSVSGLKAELKFLASIFDKNHERFRIVSWKLDELHCQFLVPQQGSPHSLPPPLTLHCNIT :. : ..:.:. : ..: :: :. .: . NP_001 MRMDSLTEEKLECR-LWCCLSDPS--PPGLAARCCVL 10 20 30 70 80 90 100 110 pF1KE3 E----------SYPSSSPIWFVDSEDPNLTSVLERLEDTKNNNLLRQQLKWLICELCSLY : ::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 ERSIVPSLRQESYPSSSPIWFVDSEDPNLTSVLERLEDTKNNNLLRQQLKWLICELCSLY 40 50 60 70 80 90 120 130 140 150 160 170 pF1KE3 NLPKHLDVEMLDQPLPTGQNGTTEEVTSEEEEEEEEMAEDIEDLDHYEMKEEEPISGKKS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 NLPKHLDVEMLDQPLPTGQNGTTEEVTSEEEEEEEEMAEDIEDLDHYEMKEEEPISGKKS 100 110 120 130 140 150 180 190 200 210 220 230 pF1KE3 EDEGIEKENLAILEKIRKTQRQDHLNGAVSGSVQASDRLMKELRDIYRSQSYKTGIYSVE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 EDEGIEKENLAILEKIRKTQRQDHLNGAVSGSVQASDRLMKELRDIYRSQSYKTGIYSVE 160 170 180 190 200 210 240 250 260 270 280 290 pF1KE3 LINDSLYDWHVKLQKVDPDSPLHSDLQILKEKEGIEYILLNFSFKDNFPFDPPFVRVVLP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 LINDSLYDWHVKLQKVDPDSPLHSDLQILKEKEGIEYILLNFSFKDNFPFDPPFVRVVLP 220 230 240 250 260 270 300 310 320 330 340 350 pF1KE3 VLSGGYVLGGGALCMELLTKQGWSSAYSIESVIMQINATLVKGKARVQFGANKNQYNLAR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 VLSGGYVLGGGALCMELLTKQGWSSAYSIESVIMQINATLVKGKARVQFGANKNQYNLAR 280 290 300 310 320 330 360 370 pF1KE3 AQQSYNSIVQIHEKNGWYTPPKEDG ::::::::::::::::::::::::: NP_001 AQQSYNSIVQIHEKNGWYTPPKEDG 340 350 >>XP_005254844 (OMIM: 612501) PREDICTED: ubiquitin-conju (314 aa) initn: 1976 init1: 1976 opt: 1976 Z-score: 1647.9 bits: 313.3 E(85289): 4.8e-85 Smith-Waterman score: 1976; 99.7% identity (99.7% similar) in 297 aa overlap (1-297:1-297) 10 20 30 40 50 60 pF1KE3 MSVSGLKAELKFLASIFDKNHERFRIVSWKLDELHCQFLVPQQGSPHSLPPPLTLHCNIT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 MSVSGLKAELKFLASIFDKNHERFRIVSWKLDELHCQFLVPQQGSPHSLPPPLTLHCNIT 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 ESYPSSSPIWFVDSEDPNLTSVLERLEDTKNNNLLRQQLKWLICELCSLYNLPKHLDVEM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 ESYPSSSPIWFVDSEDPNLTSVLERLEDTKNNNLLRQQLKWLICELCSLYNLPKHLDVEM 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 LDQPLPTGQNGTTEEVTSEEEEEEEEMAEDIEDLDHYEMKEEEPISGKKSEDEGIEKENL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 LDQPLPTGQNGTTEEVTSEEEEEEEEMAEDIEDLDHYEMKEEEPISGKKSEDEGIEKENL 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 AILEKIRKTQRQDHLNGAVSGSVQASDRLMKELRDIYRSQSYKTGIYSVELINDSLYDWH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 AILEKIRKTQRQDHLNGAVSGSVQASDRLMKELRDIYRSQSYKTGIYSVELINDSLYDWH 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE3 VKLQKVDPDSPLHSDLQILKEKEGIEYILLNFSFKDNFPFDPPFVRVVLPVLSGGYVLGG ::::::::::::::::::::::::::::::::::::::::::::::::::::::: : XP_005 VKLQKVDPDSPLHSDLQILKEKEGIEYILLNFSFKDNFPFDPPFVRVVLPVLSGGLVHPS 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE3 GALCMELLTKQGWSSAYSIESVIMQINATLVKGKARVQFGANKNQYNLARAQQSYNSIVQ XP_005 KGRWLNVLTVVCLD 310 >>NP_001271311 (OMIM: 612501) ubiquitin-conjugating enzy (340 aa) initn: 2239 init1: 1610 opt: 1614 Z-score: 1348.4 bits: 258.0 E(85289): 2.3e-68 Smith-Waterman score: 2173; 90.7% identity (90.7% similar) in 375 aa overlap (1-375:1-340) 10 20 30 40 50 60 pF1KE3 MSVSGLKAELKFLASIFDKNHERFRIVSWKLDELHCQFLVPQQGSPHSLPPPLTLHCNIT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MSVSGLKAELKFLASIFDKNHERFRIVSWKLDELHCQFLVPQQGSPHSLPPPLTLHCNIT 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 ESYPSSSPIWFVDSEDPNLTSVLERLEDTKNNNLLRQQLKWLICELCSLYNLPKHLDVEM :::::::::::::::::::::::::::::::::: NP_001 ESYPSSSPIWFVDSEDPNLTSVLERLEDTKNNNL-------------------------- 70 80 90 130 140 150 160 170 180 pF1KE3 LDQPLPTGQNGTTEEVTSEEEEEEEEMAEDIEDLDHYEMKEEEPISGKKSEDEGIEKENL ::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 ---------NGTTEEVTSEEEEEEEEMAEDIEDLDHYEMKEEEPISGKKSEDEGIEKENL 100 110 120 130 140 190 200 210 220 230 240 pF1KE3 AILEKIRKTQRQDHLNGAVSGSVQASDRLMKELRDIYRSQSYKTGIYSVELINDSLYDWH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 AILEKIRKTQRQDHLNGAVSGSVQASDRLMKELRDIYRSQSYKTGIYSVELINDSLYDWH 150 160 170 180 190 200 250 260 270 280 290 300 pF1KE3 VKLQKVDPDSPLHSDLQILKEKEGIEYILLNFSFKDNFPFDPPFVRVVLPVLSGGYVLGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 VKLQKVDPDSPLHSDLQILKEKEGIEYILLNFSFKDNFPFDPPFVRVVLPVLSGGYVLGG 210 220 230 240 250 260 310 320 330 340 350 360 pF1KE3 GALCMELLTKQGWSSAYSIESVIMQINATLVKGKARVQFGANKNQYNLARAQQSYNSIVQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 GALCMELLTKQGWSSAYSIESVIMQINATLVKGKARVQFGANKNQYNLARAQQSYNSIVQ 270 280 290 300 310 320 370 pF1KE3 IHEKNGWYTPPKEDG ::::::::::::::: NP_001 IHEKNGWYTPPKEDG 330 340 >>XP_016878215 (OMIM: 612501) PREDICTED: ubiquitin-conju (298 aa) initn: 1558 init1: 1558 opt: 1558 Z-score: 1302.9 bits: 249.4 E(85289): 7.8e-66 Smith-Waterman score: 1565; 86.9% identity (90.5% similar) in 283 aa overlap (25-297:2-281) 10 20 30 40 50 60 pF1KE3 MSVSGLKAELKFLASIFDKNHERFRIVSWKLDELHCQFLVPQQGSPHSLPPPLTLHCNIT :. : ..:.:. : ..: :: :. .: . XP_016 MRMDSLTEEKLECR-LWCCLSDPS--PPGLAARCCVL 10 20 30 70 80 90 100 110 pF1KE3 E----------SYPSSSPIWFVDSEDPNLTSVLERLEDTKNNNLLRQQLKWLICELCSLY : ::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 ERSIVPSLRQESYPSSSPIWFVDSEDPNLTSVLERLEDTKNNNLLRQQLKWLICELCSLY 40 50 60 70 80 90 120 130 140 150 160 170 pF1KE3 NLPKHLDVEMLDQPLPTGQNGTTEEVTSEEEEEEEEMAEDIEDLDHYEMKEEEPISGKKS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 NLPKHLDVEMLDQPLPTGQNGTTEEVTSEEEEEEEEMAEDIEDLDHYEMKEEEPISGKKS 100 110 120 130 140 150 180 190 200 210 220 230 pF1KE3 EDEGIEKENLAILEKIRKTQRQDHLNGAVSGSVQASDRLMKELRDIYRSQSYKTGIYSVE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 EDEGIEKENLAILEKIRKTQRQDHLNGAVSGSVQASDRLMKELRDIYRSQSYKTGIYSVE 160 170 180 190 200 210 240 250 260 270 280 290 pF1KE3 LINDSLYDWHVKLQKVDPDSPLHSDLQILKEKEGIEYILLNFSFKDNFPFDPPFVRVVLP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 LINDSLYDWHVKLQKVDPDSPLHSDLQILKEKEGIEYILLNFSFKDNFPFDPPFVRVVLP 220 230 240 250 260 270 300 310 320 330 340 350 pF1KE3 VLSGGYVLGGGALCMELLTKQGWSSAYSIESVIMQINATLVKGKARVQFGANKNQYNLAR ::::: : XP_016 VLSGGLVHPSKGRWLNVLTVVCLD 280 290 >>XP_011520530 (OMIM: 612501) PREDICTED: ubiquitin-conju (198 aa) initn: 1316 init1: 1316 opt: 1316 Z-score: 1105.5 bits: 212.3 E(85289): 7.8e-55 Smith-Waterman score: 1316; 100.0% identity (100.0% similar) in 196 aa overlap (1-196:1-196) 10 20 30 40 50 60 pF1KE3 MSVSGLKAELKFLASIFDKNHERFRIVSWKLDELHCQFLVPQQGSPHSLPPPLTLHCNIT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 MSVSGLKAELKFLASIFDKNHERFRIVSWKLDELHCQFLVPQQGSPHSLPPPLTLHCNIT 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 ESYPSSSPIWFVDSEDPNLTSVLERLEDTKNNNLLRQQLKWLICELCSLYNLPKHLDVEM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 ESYPSSSPIWFVDSEDPNLTSVLERLEDTKNNNLLRQQLKWLICELCSLYNLPKHLDVEM 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 LDQPLPTGQNGTTEEVTSEEEEEEEEMAEDIEDLDHYEMKEEEPISGKKSEDEGIEKENL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 LDQPLPTGQNGTTEEVTSEEEEEEEEMAEDIEDLDHYEMKEEEPISGKKSEDEGIEKENL 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 AILEKIRKTQRQDHLNGAVSGSVQASDRLMKELRDIYRSQSYKTGIYSVELINDSLYDWH :::::::::::::::: XP_011 AILEKIRKTQRQDHLNSY 190 >>XP_006720833 (OMIM: 612501) PREDICTED: ubiquitin-conju (235 aa) initn: 1316 init1: 1316 opt: 1316 Z-score: 1104.4 bits: 212.4 E(85289): 8.9e-55 Smith-Waterman score: 1316; 100.0% identity (100.0% similar) in 196 aa overlap (1-196:1-196) 10 20 30 40 50 60 pF1KE3 MSVSGLKAELKFLASIFDKNHERFRIVSWKLDELHCQFLVPQQGSPHSLPPPLTLHCNIT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 MSVSGLKAELKFLASIFDKNHERFRIVSWKLDELHCQFLVPQQGSPHSLPPPLTLHCNIT 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 ESYPSSSPIWFVDSEDPNLTSVLERLEDTKNNNLLRQQLKWLICELCSLYNLPKHLDVEM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 ESYPSSSPIWFVDSEDPNLTSVLERLEDTKNNNLLRQQLKWLICELCSLYNLPKHLDVEM 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 LDQPLPTGQNGTTEEVTSEEEEEEEEMAEDIEDLDHYEMKEEEPISGKKSEDEGIEKENL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 LDQPLPTGQNGTTEEVTSEEEEEEEEMAEDIEDLDHYEMKEEEPISGKKSEDEGIEKENL 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 AILEKIRKTQRQDHLNGAVSGSVQASDRLMKELRDIYRSQSYKTGIYSVELINDSLYDWH :::::::::::::::: XP_006 AILEKIRKTQRQDHLNDNFPFDPPFVRVVLPVLSGGLVHPSKGRWLNVLTVVCLD 190 200 210 220 230 >>XP_005254845 (OMIM: 612501) PREDICTED: ubiquitin-conju (296 aa) initn: 1316 init1: 1316 opt: 1316 Z-score: 1103.1 bits: 212.4 E(85289): 1.1e-54 Smith-Waterman score: 1825; 78.9% identity (78.9% similar) in 375 aa overlap (1-375:1-296) 10 20 30 40 50 60 pF1KE3 MSVSGLKAELKFLASIFDKNHERFRIVSWKLDELHCQFLVPQQGSPHSLPPPLTLHCNIT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 MSVSGLKAELKFLASIFDKNHERFRIVSWKLDELHCQFLVPQQGSPHSLPPPLTLHCNIT 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 ESYPSSSPIWFVDSEDPNLTSVLERLEDTKNNNLLRQQLKWLICELCSLYNLPKHLDVEM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 ESYPSSSPIWFVDSEDPNLTSVLERLEDTKNNNLLRQQLKWLICELCSLYNLPKHLDVEM 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 LDQPLPTGQNGTTEEVTSEEEEEEEEMAEDIEDLDHYEMKEEEPISGKKSEDEGIEKENL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 LDQPLPTGQNGTTEEVTSEEEEEEEEMAEDIEDLDHYEMKEEEPISGKKSEDEGIEKENL 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 AILEKIRKTQRQDHLNGAVSGSVQASDRLMKELRDIYRSQSYKTGIYSVELINDSLYDWH :::::::::::::::: XP_005 AILEKIRKTQRQDHLN-------------------------------------------- 190 250 260 270 280 290 300 pF1KE3 VKLQKVDPDSPLHSDLQILKEKEGIEYILLNFSFKDNFPFDPPFVRVVLPVLSGGYVLGG ::::::::::::::::::::::::: XP_005 -----------------------------------DNFPFDPPFVRVVLPVLSGGYVLGG 200 210 220 310 320 330 340 350 360 pF1KE3 GALCMELLTKQGWSSAYSIESVIMQINATLVKGKARVQFGANKNQYNLARAQQSYNSIVQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 GALCMELLTKQGWSSAYSIESVIMQINATLVKGKARVQFGANKNQYNLARAQQSYNSIVQ 230 240 250 260 270 280 370 pF1KE3 IHEKNGWYTPPKEDG ::::::::::::::: XP_005 IHEKNGWYTPPKEDG 290 >>XP_016878216 (OMIM: 612501) PREDICTED: ubiquitin-conju (279 aa) initn: 1711 init1: 1082 opt: 1086 Z-score: 913.4 bits: 177.3 E(85289): 3.9e-44 Smith-Waterman score: 1645; 87.9% identity (87.9% similar) in 297 aa overlap (1-297:1-262) 10 20 30 40 50 60 pF1KE3 MSVSGLKAELKFLASIFDKNHERFRIVSWKLDELHCQFLVPQQGSPHSLPPPLTLHCNIT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 MSVSGLKAELKFLASIFDKNHERFRIVSWKLDELHCQFLVPQQGSPHSLPPPLTLHCNIT 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 ESYPSSSPIWFVDSEDPNLTSVLERLEDTKNNNLLRQQLKWLICELCSLYNLPKHLDVEM :::::::::::::::::::::::::::::::::: XP_016 ESYPSSSPIWFVDSEDPNLTSVLERLEDTKNNNL-------------------------- 70 80 90 130 140 150 160 170 180 pF1KE3 LDQPLPTGQNGTTEEVTSEEEEEEEEMAEDIEDLDHYEMKEEEPISGKKSEDEGIEKENL ::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 ---------NGTTEEVTSEEEEEEEEMAEDIEDLDHYEMKEEEPISGKKSEDEGIEKENL 100 110 120 130 140 190 200 210 220 230 240 pF1KE3 AILEKIRKTQRQDHLNGAVSGSVQASDRLMKELRDIYRSQSYKTGIYSVELINDSLYDWH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 AILEKIRKTQRQDHLNGAVSGSVQASDRLMKELRDIYRSQSYKTGIYSVELINDSLYDWH 150 160 170 180 190 200 250 260 270 280 290 300 pF1KE3 VKLQKVDPDSPLHSDLQILKEKEGIEYILLNFSFKDNFPFDPPFVRVVLPVLSGGYVLGG ::::::::::::::::::::::::::::::::::::::::::::::::::::::: : XP_016 VKLQKVDPDSPLHSDLQILKEKEGIEYILLNFSFKDNFPFDPPFVRVVLPVLSGGLVHPS 210 220 230 240 250 260 310 320 330 340 350 360 pF1KE3 GALCMELLTKQGWSSAYSIESVIMQINATLVKGKARVQFGANKNQYNLARAQQSYNSIVQ XP_016 KGRWLNVLTVVCLD 270 >>XP_016878217 (OMIM: 612501) PREDICTED: ubiquitin-conju (261 aa) initn: 1413 init1: 678 opt: 686 Z-score: 583.4 bits: 116.1 E(85289): 9.3e-26 Smith-Waterman score: 1494; 69.6% identity (69.6% similar) in 375 aa overlap (1-375:1-261) 10 20 30 40 50 60 pF1KE3 MSVSGLKAELKFLASIFDKNHERFRIVSWKLDELHCQFLVPQQGSPHSLPPPLTLHCNIT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 MSVSGLKAELKFLASIFDKNHERFRIVSWKLDELHCQFLVPQQGSPHSLPPPLTLHCNIT 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 ESYPSSSPIWFVDSEDPNLTSVLERLEDTKNNNLLRQQLKWLICELCSLYNLPKHLDVEM :::::::::::::::::::::::::::::::::: XP_016 ESYPSSSPIWFVDSEDPNLTSVLERLEDTKNNNL-------------------------- 70 80 90 130 140 150 160 170 180 pF1KE3 LDQPLPTGQNGTTEEVTSEEEEEEEEMAEDIEDLDHYEMKEEEPISGKKSEDEGIEKENL ::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 ---------NGTTEEVTSEEEEEEEEMAEDIEDLDHYEMKEEEPISGKKSEDEGIEKENL 100 110 120 130 140 190 200 210 220 230 240 pF1KE3 AILEKIRKTQRQDHLNGAVSGSVQASDRLMKELRDIYRSQSYKTGIYSVELINDSLYDWH :::::::::::::::: XP_016 AILEKIRKTQRQDHLN-------------------------------------------- 150 160 250 260 270 280 290 300 pF1KE3 VKLQKVDPDSPLHSDLQILKEKEGIEYILLNFSFKDNFPFDPPFVRVVLPVLSGGYVLGG ::::::::::::::::::::::::: XP_016 -----------------------------------DNFPFDPPFVRVVLPVLSGGYVLGG 170 180 310 320 330 340 350 360 pF1KE3 GALCMELLTKQGWSSAYSIESVIMQINATLVKGKARVQFGANKNQYNLARAQQSYNSIVQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 GALCMELLTKQGWSSAYSIESVIMQINATLVKGKARVQFGANKNQYNLARAQQSYNSIVQ 190 200 210 220 230 240 370 pF1KE3 IHEKNGWYTPPKEDG ::::::::::::::: XP_016 IHEKNGWYTPPKEDG 250 260 375 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 14:11:14 2016 done: Sun Nov 6 14:11:16 2016 Total Scan time: 9.580 Total Display time: 0.020 Function used was FASTA [36.3.4 Apr, 2011]