FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE2385, 626 aa 1>>>pF1KE2385 626 - 626 aa - 626 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 7.2429+/-0.000905; mu= 10.9603+/- 0.055 mean_var=122.8491+/-24.905, 0's: 0 Z-trim(109.1): 18 B-trim: 85 in 1/53 Lambda= 0.115715 statistics sampled from 10644 (10650) to 10644 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.68), E-opt: 0.2 (0.327), width: 16 Scan time: 3.390 The best scores are: opt bits E(32554) CCDS10106.1 WDR76 gene_id:79968|Hs108|chr15 ( 626) 4139 702.4 4.7e-202 CCDS53938.1 WDR76 gene_id:79968|Hs108|chr15 ( 562) 3740 635.7 4.8e-182 >>CCDS10106.1 WDR76 gene_id:79968|Hs108|chr15 (626 aa) initn: 4139 init1: 4139 opt: 4139 Z-score: 3741.0 bits: 702.4 E(32554): 4.7e-202 Smith-Waterman score: 4139; 99.8% identity (100.0% similar) in 626 aa overlap (1-626:1-626) 10 20 30 40 50 60 pF1KE2 MSRSGAAAEKADSRQRPQMKVNEYKENQNIAYVSLRPAQTTVLIKTAKVYLAPFSLSNYQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 MSRSGAAAEKADSRQRPQMKVNEYKENQNIAYVSLRPAQTTVLIKTAKVYLAPFSLSNYQ 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 LDQLMCPKSLSEKNSNNEVACKKTKIKKTCRRIIPPKMKNTSSKAESTLQNSSSAVHTES :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 LDQLMCPKSLSEKNSNNEVACKKTKIKKTCRRIIPPKMKNTSSKAESTLQNSSSAVHTES 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 NKLQPKRTADAMNLSVDVESSQDGDSDEDTTPALDFSGLSPYERKRLKNISENADFFASL ::::::::::::::::::::::::::::::::.::::::::::::::::::::::::::: CCDS10 NKLQPKRTADAMNLSVDVESSQDGDSDEDTTPSLDFSGLSPYERKRLKNISENADFFASL 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE2 QLSESAARLREMIEKRQPPKSKRKKPKRENGIGCRRSMRLLKVDPSGVSLPAAPTPPTLV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 QLSESAARLREMIEKRQPPKSKRKKPKRENGIGCRRSMRLLKVDPSGVSLPAAPTPPTLV 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE2 ADETPLLPPGPLEMTSENQEDNNERFKGFLHTWAGMSKPSSKNTEKGLSSIKSYKANLNG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 ADETPLLPPGPLEMTSENQEDNNERFKGFLHTWAGMSKPSSKNTEKGLSSIKSYKANLNG 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE2 MVISEDTVYKVTTGPIFSMALHPSETRTLVAVGAKFGQVGLCDLTQQPKEDGVYVFHPHS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 MVISEDTVYKVTTGPIFSMALHPSETRTLVAVGAKFGQVGLCDLTQQPKEDGVYVFHPHS 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE2 QPVSCLYFSPANPAHILSLSYDGTLRCGDFSRAIFEEVYRNERSSFSSFDFLAEDASTLI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 QPVSCLYFSPANPAHILSLSYDGTLRCGDFSRAIFEEVYRNERSSFSSFDFLAEDASTLI 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE2 VGHWDGNMSLVDRRTPGTSYEKLTSSSMGKIRTVHVHPVHRQYFITAGLRDTHIYDARRL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 VGHWDGNMSLVDRRTPGTSYEKLTSSSMGKIRTVHVHPVHRQYFITAGLRDTHIYDARRL 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE2 NSRRSQPLISLTEHTKSIASAYFSPLTGNRVVTTCADCNLRIFDSSCISSKIPLLTTIRH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 NSRRSQPLISLTEHTKSIASAYFSPLTGNRVVTTCADCNLRIFDSSCISSKIPLLTTIRH 490 500 510 520 530 540 550 560 570 580 590 600 pF1KE2 NTFTGRWLTRFQAMWDPKQEDCVIVGSMAHPRRVEIFHETGKRVHSFGGEYLVSVCSINA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 NTFTGRWLTRFQAMWDPKQEDCVIVGSMAHPRRVEIFHETGKRVHSFGGEYLVSVCSINA 550 560 570 580 590 600 610 620 pF1KE2 MHPTRYILAGGNSSGKIHVFMNEKSC :::::::::::::::::::::::::: CCDS10 MHPTRYILAGGNSSGKIHVFMNEKSC 610 620 >>CCDS53938.1 WDR76 gene_id:79968|Hs108|chr15 (562 aa) initn: 3740 init1: 3740 opt: 3740 Z-score: 3381.8 bits: 635.7 E(32554): 4.8e-182 Smith-Waterman score: 3740; 99.8% identity (100.0% similar) in 562 aa overlap (65-626:1-562) 40 50 60 70 80 90 pF1KE2 LRPAQTTVLIKTAKVYLAPFSLSNYQLDQLMCPKSLSEKNSNNEVACKKTKIKKTCRRII :::::::::::::::::::::::::::::: CCDS53 MCPKSLSEKNSNNEVACKKTKIKKTCRRII 10 20 30 100 110 120 130 140 150 pF1KE2 PPKMKNTSSKAESTLQNSSSAVHTESNKLQPKRTADAMNLSVDVESSQDGDSDEDTTPAL ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::.: CCDS53 PPKMKNTSSKAESTLQNSSSAVHTESNKLQPKRTADAMNLSVDVESSQDGDSDEDTTPSL 40 50 60 70 80 90 160 170 180 190 200 210 pF1KE2 DFSGLSPYERKRLKNISENADFFASLQLSESAARLREMIEKRQPPKSKRKKPKRENGIGC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS53 DFSGLSPYERKRLKNISENADFFASLQLSESAARLREMIEKRQPPKSKRKKPKRENGIGC 100 110 120 130 140 150 220 230 240 250 260 270 pF1KE2 RRSMRLLKVDPSGVSLPAAPTPPTLVADETPLLPPGPLEMTSENQEDNNERFKGFLHTWA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS53 RRSMRLLKVDPSGVSLPAAPTPPTLVADETPLLPPGPLEMTSENQEDNNERFKGFLHTWA 160 170 180 190 200 210 280 290 300 310 320 330 pF1KE2 GMSKPSSKNTEKGLSSIKSYKANLNGMVISEDTVYKVTTGPIFSMALHPSETRTLVAVGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS53 GMSKPSSKNTEKGLSSIKSYKANLNGMVISEDTVYKVTTGPIFSMALHPSETRTLVAVGA 220 230 240 250 260 270 340 350 360 370 380 390 pF1KE2 KFGQVGLCDLTQQPKEDGVYVFHPHSQPVSCLYFSPANPAHILSLSYDGTLRCGDFSRAI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS53 KFGQVGLCDLTQQPKEDGVYVFHPHSQPVSCLYFSPANPAHILSLSYDGTLRCGDFSRAI 280 290 300 310 320 330 400 410 420 430 440 450 pF1KE2 FEEVYRNERSSFSSFDFLAEDASTLIVGHWDGNMSLVDRRTPGTSYEKLTSSSMGKIRTV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS53 FEEVYRNERSSFSSFDFLAEDASTLIVGHWDGNMSLVDRRTPGTSYEKLTSSSMGKIRTV 340 350 360 370 380 390 460 470 480 490 500 510 pF1KE2 HVHPVHRQYFITAGLRDTHIYDARRLNSRRSQPLISLTEHTKSIASAYFSPLTGNRVVTT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS53 HVHPVHRQYFITAGLRDTHIYDARRLNSRRSQPLISLTEHTKSIASAYFSPLTGNRVVTT 400 410 420 430 440 450 520 530 540 550 560 570 pF1KE2 CADCNLRIFDSSCISSKIPLLTTIRHNTFTGRWLTRFQAMWDPKQEDCVIVGSMAHPRRV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS53 CADCNLRIFDSSCISSKIPLLTTIRHNTFTGRWLTRFQAMWDPKQEDCVIVGSMAHPRRV 460 470 480 490 500 510 580 590 600 610 620 pF1KE2 EIFHETGKRVHSFGGEYLVSVCSINAMHPTRYILAGGNSSGKIHVFMNEKSC :::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS53 EIFHETGKRVHSFGGEYLVSVCSINAMHPTRYILAGGNSSGKIHVFMNEKSC 520 530 540 550 560 626 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 14:14:29 2016 done: Sun Nov 6 14:14:29 2016 Total Scan time: 3.390 Total Display time: 0.000 Function used was FASTA [36.3.4 Apr, 2011]