FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE2361, 264 aa 1>>>pF1KE2361 264 - 264 aa - 264 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 8.1775+/-0.00072; mu= 2.8684+/- 0.044 mean_var=152.2230+/-30.935, 0's: 0 Z-trim(115.1): 5 B-trim: 10 in 1/53 Lambda= 0.103952 statistics sampled from 15606 (15609) to 15606 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.809), E-opt: 0.2 (0.479), width: 16 Scan time: 2.040 The best scores are: opt bits E(32554) CCDS10070.2 CHAC1 gene_id:79094|Hs108|chr15 ( 264) 1859 289.5 1.6e-78 CCDS45233.1 CHAC1 gene_id:79094|Hs108|chr15 ( 219) 1057 169.2 2.2e-42 CCDS33196.1 CHAC2 gene_id:494143|Hs108|chr2 ( 184) 594 99.7 1.5e-21 >>CCDS10070.2 CHAC1 gene_id:79094|Hs108|chr15 (264 aa) initn: 1859 init1: 1859 opt: 1859 Z-score: 1523.2 bits: 289.5 E(32554): 1.6e-78 Smith-Waterman score: 1859; 100.0% identity (100.0% similar) in 264 aa overlap (1-264:1-264) 10 20 30 40 50 60 pF1KE2 MGGAQLELPSGARPGVCVRRSFRAHAGDQPRRPPGPIPVPGTMKQESAAPNTPPTSQSPT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 MGGAQLELPSGARPGVCVRRSFRAHAGDQPRRPPGPIPVPGTMKQESAAPNTPPTSQSPT 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 PSAQFPRNDGDPQALWIFGYGSLVWRPDFAYSDSRVGFVRGYSRRFWQGDTFHRGSDKMP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 PSAQFPRNDGDPQALWIFGYGSLVWRPDFAYSDSRVGFVRGYSRRFWQGDTFHRGSDKMP 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 GRVVTLLEDHEGCTWGVAYQVQGEQVSKALKYLNVREAVLGGYDTKEVTFYPQDAPDQPL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 GRVVTLLEDHEGCTWGVAYQVQGEQVSKALKYLNVREAVLGGYDTKEVTFYPQDAPDQPL 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE2 KALAYVATPQNPGYLGPAPEEAIATQILACRGFSGHNLEYLLRLADFMQLCGPQAQDEHL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 KALAYVATPQNPGYLGPAPEEAIATQILACRGFSGHNLEYLLRLADFMQLCGPQAQDEHL 190 200 210 220 230 240 250 260 pF1KE2 AAIVDAVGTMLPCFCPTEQALALV :::::::::::::::::::::::: CCDS10 AAIVDAVGTMLPCFCPTEQALALV 250 260 >>CCDS45233.1 CHAC1 gene_id:79094|Hs108|chr15 (219 aa) initn: 1057 init1: 1057 opt: 1057 Z-score: 874.4 bits: 169.2 E(32554): 2.2e-42 Smith-Waterman score: 1468; 83.0% identity (83.0% similar) in 264 aa overlap (1-264:1-219) 10 20 30 40 50 60 pF1KE2 MGGAQLELPSGARPGVCVRRSFRAHAGDQPRRPPGPIPVPGTMKQESAAPNTPPTSQSPT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 MGGAQLELPSGARPGVCVRRSFRAHAGDQPRRPPGPIPVPGTMKQESAAPNTPPTSQSPT 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 PSAQFPRNDGDPQALWIFGYGSLVWRPDFAYSDSRVGFVRGYSRRFWQGDTFHRGSDKMP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 PSAQFPRNDGDPQALWIFGYGSLVWRPDFAYSDSRVGFVRGYSRRFWQGDTFHRGSDKMP 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 GRVVTLLEDHEGCTWGVAYQVQGEQVSKALKYLNVREAVLGGYDTKEVTFYPQDAPDQPL ::::::::::::::::::::::::: CCDS45 GRVVTLLEDHEGCTWGVAYQVQGEQ----------------------------------- 130 140 190 200 210 220 230 240 pF1KE2 KALAYVATPQNPGYLGPAPEEAIATQILACRGFSGHNLEYLLRLADFMQLCGPQAQDEHL :::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 ----------NPGYLGPAPEEAIATQILACRGFSGHNLEYLLRLADFMQLCGPQAQDEHL 150 160 170 180 190 250 260 pF1KE2 AAIVDAVGTMLPCFCPTEQALALV :::::::::::::::::::::::: CCDS45 AAIVDAVGTMLPCFCPTEQALALV 200 210 >>CCDS33196.1 CHAC2 gene_id:494143|Hs108|chr2 (184 aa) initn: 595 init1: 349 opt: 594 Z-score: 500.3 bits: 99.7 E(32554): 1.5e-21 Smith-Waterman score: 594; 51.5% identity (72.2% similar) in 169 aa overlap (75-243:1-167) 50 60 70 80 90 100 pF1KE2 QESAAPNTPPTSQSPTPSAQFPRNDGDPQALWIFGYGSLVWRPDFAYSDSRVGFVRGYSR .:.::::::.:. :: :.:. ::.. .::: CCDS33 MWVFGYGSLIWKVDFPYQDKLVGYITNYSR 10 20 30 110 120 130 140 150 160 pF1KE2 RFWQGDTFHRGSDKMPGRVVTLLEDHEGCTWGVAYQVQGEQVSKALKYLNVREAVLGGYD :::::.: ::: :::::::.:: ::.:::::.. . .. ::. :: ::: CCDS33 RFWQGSTDHRGVPGKPGRVVTLVEDPAGCVWGVAYRLPVGKEEEVKAYLDFREK--GGYR 40 50 60 70 80 170 180 190 200 210 220 pF1KE2 TKEVTFYPQDAPDQPLKALAYVATPQNPGYLGPAPEEAIATQILACRGFSGHNLEYLLRL : : :::.: .:...: :..: .:: :::::: : :: ::. : ::.: :::..: CCDS33 TTTVIFYPKDPTTKPFSVLLYIGTCDNPDYLGPAPLEDIAEQIFNAAGPSGRNTEYLFEL 90 100 110 120 130 140 230 240 250 260 pF1KE2 ADFMQLCGPQAQDEHLAAIVDAVGTMLPCFCPTEQALALV :. .. :. :::: :. CCDS33 ANSIRNLVPEEADEHLFALEKLVKERLEGKQNLNCI 150 160 170 180 264 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 14:19:09 2016 done: Sun Nov 6 14:19:09 2016 Total Scan time: 2.040 Total Display time: 0.000 Function used was FASTA [36.3.4 Apr, 2011]