FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6534, 64 aa 1>>>pF1KE6534 64 - 64 aa - 64 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 4.7823+/-0.000475; mu= 8.6110+/- 0.029 mean_var=46.1747+/- 9.224, 0's: 0 Z-trim(114.8): 2 B-trim: 466 in 1/50 Lambda= 0.188744 statistics sampled from 15342 (15343) to 15342 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.855), E-opt: 0.2 (0.471), width: 16 Scan time: 0.940 The best scores are: opt bits E(32554) CCDS10037.1 NOP10 gene_id:55505|Hs108|chr15 ( 64) 444 127.1 7.5e-31 >>CCDS10037.1 NOP10 gene_id:55505|Hs108|chr15 (64 aa) initn: 444 init1: 444 opt: 444 Z-score: 667.3 bits: 127.1 E(32554): 7.5e-31 Smith-Waterman score: 444; 100.0% identity (100.0% similar) in 64 aa overlap (1-64:1-64) 10 20 30 40 50 60 pF1KE6 MFLQYYLNEQGDRVYTLKKFDPMGQQTCSAHPARFSPDDKYSRHRITIKKRFKVLMTQQP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 MFLQYYLNEQGDRVYTLKKFDPMGQQTCSAHPARFSPDDKYSRHRITIKKRFKVLMTQQP 10 20 30 40 50 60 pF1KE6 RPVL :::: CCDS10 RPVL 64 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 14:10:54 2016 done: Tue Nov 8 14:10:54 2016 Total Scan time: 0.940 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]