FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE4436, 453 aa 1>>>pF1KE4436 453 - 453 aa - 453 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 12.1622+/-0.00119; mu= -11.3850+/- 0.072 mean_var=391.5989+/-78.046, 0's: 0 Z-trim(113.9): 9 B-trim: 0 in 0/53 Lambda= 0.064812 statistics sampled from 14513 (14520) to 14513 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.745), E-opt: 0.2 (0.446), width: 16 Scan time: 3.570 The best scores are: opt bits E(32554) CCDS9833.1 DLST gene_id:1743|Hs108|chr14 ( 453) 2963 290.8 1.9e-78 >>CCDS9833.1 DLST gene_id:1743|Hs108|chr14 (453 aa) initn: 2963 init1: 2963 opt: 2963 Z-score: 1521.8 bits: 290.8 E(32554): 1.9e-78 Smith-Waterman score: 2963; 100.0% identity (100.0% similar) in 453 aa overlap (1-453:1-453) 10 20 30 40 50 60 pF1KE4 MLSRSRCVSRAFSRSLSAFQKGNCPLGRRSLPGVSLCQGPGYPNSRKVVINNSVFSVRFF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS98 MLSRSRCVSRAFSRSLSAFQKGNCPLGRRSLPGVSLCQGPGYPNSRKVVINNSVFSVRFF 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 RTTAVCKDDLVTVKTPAFAESVTEGDVRWEKAVGDTVAEDEVVCEIETDKTSVQVPSPAN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS98 RTTAVCKDDLVTVKTPAFAESVTEGDVRWEKAVGDTVAEDEVVCEIETDKTSVQVPSPAN 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 GVIEALLVPDGGKVEGGTPLFTLRKTGAAPAKAKPAEAPAAAAPKAEPTAAAVPPPAAPI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS98 GVIEALLVPDGGKVEGGTPLFTLRKTGAAPAKAKPAEAPAAAAPKAEPTAAAVPPPAAPI 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE4 PTQMPPVPSPSQPPSGKPVSAVKPTVAPPLAEPGAGKGLRSEHREKMNRMRQRIAQRLKE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS98 PTQMPPVPSPSQPPSGKPVSAVKPTVAPPLAEPGAGKGLRSEHREKMNRMRQRIAQRLKE 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE4 AQNTCAMLTTFNEIDMSNIQEMRARHKEAFLKKHNLKLGFMSAFVKASAFALQEQPVVNA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS98 AQNTCAMLTTFNEIDMSNIQEMRARHKEAFLKKHNLKLGFMSAFVKASAFALQEQPVVNA 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE4 VIDDTTKEVVYRDYIDISVAVATPRGLVVPVIRNVEAMNFADIERTITELGEKARKNELA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS98 VIDDTTKEVVYRDYIDISVAVATPRGLVVPVIRNVEAMNFADIERTITELGEKARKNELA 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE4 IEDMDGGTFTISNGGVFGSLFGTPIINPPQSAILGMHGIFDRPVAIGGKVEVRPMMYVAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS98 IEDMDGGTFTISNGGVFGSLFGTPIINPPQSAILGMHGIFDRPVAIGGKVEVRPMMYVAL 370 380 390 400 410 420 430 440 450 pF1KE4 TYDHRLIDGREAVTFLRKIKAAVEDPRVLLLDL ::::::::::::::::::::::::::::::::: CCDS98 TYDHRLIDGREAVTFLRKIKAAVEDPRVLLLDL 430 440 450 453 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 01:08:32 2016 done: Sun Nov 6 01:08:33 2016 Total Scan time: 3.570 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]