FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6261, 247 aa 1>>>pF1KE6261 247 - 247 aa - 247 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.6241+/-0.00111; mu= 9.1121+/- 0.067 mean_var=103.2296+/-20.048, 0's: 0 Z-trim(104.3): 17 B-trim: 0 in 0/51 Lambda= 0.126233 statistics sampled from 7844 (7847) to 7844 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.589), E-opt: 0.2 (0.241), width: 16 Scan time: 2.300 The best scores are: opt bits E(32554) CCDS9780.1 ATP6V1D gene_id:51382|Hs108|chr14 ( 247) 1507 284.9 3.4e-77 >>CCDS9780.1 ATP6V1D gene_id:51382|Hs108|chr14 (247 aa) initn: 1507 init1: 1507 opt: 1507 Z-score: 1499.4 bits: 284.9 E(32554): 3.4e-77 Smith-Waterman score: 1507; 99.6% identity (99.6% similar) in 247 aa overlap (1-247:1-247) 10 20 30 40 50 60 pF1KE6 MSGKDRIEIFPSRMAQTIMKARLKGAQTGRNLLKKKSDALTLRFRQILKKIIETKMLMGE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS97 MSGKDRIEIFPSRMAQTIMKARLKGAQTGRNLLKKKSDALTLRFRQILKKIIETKMLMGE 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 VMREAAFSLAEAMFTAGDFSTTVIQNVNKAQVKIRAKKDNVAGVTLPVFEHYHEGTDSYE :::::::::::: ::::::::::::::::::::::::::::::::::::::::::::::: CCDS97 VMREAAFSLAEAKFTAGDFSTTVIQNVNKAQVKIRAKKDNVAGVTLPVFEHYHEGTDSYE 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 LTGLARGGEQLAKLKRNYAKAVELLVELASLQTSFVTLDEAIKITNRRVNAIEHVIIPRI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS97 LTGLARGGEQLAKLKRNYAKAVELLVELASLQTSFVTLDEAIKITNRRVNAIEHVIIPRI 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE6 ERTLAYIITELDEREREEFYRLKKIQEKKKILKEKSEKDLEQRRAAGEVLEPANLLAEEK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS97 ERTLAYIITELDEREREEFYRLKKIQEKKKILKEKSEKDLEQRRAAGEVLEPANLLAEEK 190 200 210 220 230 240 pF1KE6 DEDLLFE ::::::: CCDS97 DEDLLFE 247 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 11:34:41 2016 done: Tue Nov 8 11:34:42 2016 Total Scan time: 2.300 Total Display time: -0.030 Function used was FASTA [36.3.4 Apr, 2011]