FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6164, 89 aa 1>>>pF1KE6164 89 - 89 aa - 89 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 4.9306+/-0.0003; mu= 10.4890+/- 0.019 mean_var=56.0819+/-11.296, 0's: 0 Z-trim(116.8): 16 B-trim: 705 in 1/54 Lambda= 0.171263 statistics sampled from 28305 (28321) to 28305 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.746), E-opt: 0.2 (0.332), width: 16 Scan time: 3.020 The best scores are: opt bits E(85289) NP_001291414 (OMIM: 607384) mitochondrial import i ( 89) 597 154.8 1.7e-38 NP_036592 (OMIM: 607384) mitochondrial import inne ( 89) 597 154.8 1.7e-38 NP_001291416 (OMIM: 607384) mitochondrial import i ( 89) 597 154.8 1.7e-38 NP_001291415 (OMIM: 607384) mitochondrial import i ( 89) 597 154.8 1.7e-38 NP_001291420 (OMIM: 607384) mitochondrial import i ( 60) 301 81.6 1.2e-16 NP_001291419 (OMIM: 607384) mitochondrial import i ( 60) 301 81.6 1.2e-16 NP_001291418 (OMIM: 607384) mitochondrial import i ( 61) 301 81.6 1.3e-16 NP_001291417 (OMIM: 607384) mitochondrial import i ( 66) 301 81.6 1.3e-16 NP_036324 (OMIM: 607388) mitochondrial import inne ( 103) 147 43.7 5.6e-05 NP_036588 (OMIM: 602251) mitochondrial import inne ( 90) 124 38.0 0.0026 >>NP_001291414 (OMIM: 607384) mitochondrial import inner (89 aa) initn: 597 init1: 597 opt: 597 Z-score: 812.2 bits: 154.8 E(85289): 1.7e-38 Smith-Waterman score: 597; 100.0% identity (100.0% similar) in 89 aa overlap (1-89:1-89) 10 20 30 40 50 60 pF1KE6 MAAQIPESDQIKQFKEFLGTYNKLTETCFLDCVKDFTTREVKPEETTCSEHCLQKYLKMT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MAAQIPESDQIKQFKEFLGTYNKLTETCFLDCVKDFTTREVKPEETTCSEHCLQKYLKMT 10 20 30 40 50 60 70 80 pF1KE6 QRISMRFQEYHIQQNEALAAKAGLLGQPR ::::::::::::::::::::::::::::: NP_001 QRISMRFQEYHIQQNEALAAKAGLLGQPR 70 80 >>NP_036592 (OMIM: 607384) mitochondrial import inner me (89 aa) initn: 597 init1: 597 opt: 597 Z-score: 812.2 bits: 154.8 E(85289): 1.7e-38 Smith-Waterman score: 597; 100.0% identity (100.0% similar) in 89 aa overlap (1-89:1-89) 10 20 30 40 50 60 pF1KE6 MAAQIPESDQIKQFKEFLGTYNKLTETCFLDCVKDFTTREVKPEETTCSEHCLQKYLKMT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_036 MAAQIPESDQIKQFKEFLGTYNKLTETCFLDCVKDFTTREVKPEETTCSEHCLQKYLKMT 10 20 30 40 50 60 70 80 pF1KE6 QRISMRFQEYHIQQNEALAAKAGLLGQPR ::::::::::::::::::::::::::::: NP_036 QRISMRFQEYHIQQNEALAAKAGLLGQPR 70 80 >>NP_001291416 (OMIM: 607384) mitochondrial import inner (89 aa) initn: 597 init1: 597 opt: 597 Z-score: 812.2 bits: 154.8 E(85289): 1.7e-38 Smith-Waterman score: 597; 100.0% identity (100.0% similar) in 89 aa overlap (1-89:1-89) 10 20 30 40 50 60 pF1KE6 MAAQIPESDQIKQFKEFLGTYNKLTETCFLDCVKDFTTREVKPEETTCSEHCLQKYLKMT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MAAQIPESDQIKQFKEFLGTYNKLTETCFLDCVKDFTTREVKPEETTCSEHCLQKYLKMT 10 20 30 40 50 60 70 80 pF1KE6 QRISMRFQEYHIQQNEALAAKAGLLGQPR ::::::::::::::::::::::::::::: NP_001 QRISMRFQEYHIQQNEALAAKAGLLGQPR 70 80 >>NP_001291415 (OMIM: 607384) mitochondrial import inner (89 aa) initn: 597 init1: 597 opt: 597 Z-score: 812.2 bits: 154.8 E(85289): 1.7e-38 Smith-Waterman score: 597; 100.0% identity (100.0% similar) in 89 aa overlap (1-89:1-89) 10 20 30 40 50 60 pF1KE6 MAAQIPESDQIKQFKEFLGTYNKLTETCFLDCVKDFTTREVKPEETTCSEHCLQKYLKMT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MAAQIPESDQIKQFKEFLGTYNKLTETCFLDCVKDFTTREVKPEETTCSEHCLQKYLKMT 10 20 30 40 50 60 70 80 pF1KE6 QRISMRFQEYHIQQNEALAAKAGLLGQPR ::::::::::::::::::::::::::::: NP_001 QRISMRFQEYHIQQNEALAAKAGLLGQPR 70 80 >>NP_001291420 (OMIM: 607384) mitochondrial import inner (60 aa) initn: 301 init1: 301 opt: 301 Z-score: 419.6 bits: 81.6 E(85289): 1.2e-16 Smith-Waterman score: 327; 67.4% identity (67.4% similar) in 89 aa overlap (1-89:1-60) 10 20 30 40 50 60 pF1KE6 MAAQIPESDQIKQFKEFLGTYNKLTETCFLDCVKDFTTREVKPEETTCSEHCLQKYLKMT ::::::::::::::::::::::::::::::::::::::::::::: NP_001 MAAQIPESDQIKQFKEFLGTYNKLTETCFLDCVKDFTTREVKPEE--------------- 10 20 30 40 70 80 pF1KE6 QRISMRFQEYHIQQNEALAAKAGLLGQPR ::::::::::::::: NP_001 --------------NEALAAKAGLLGQPR 50 60 >>NP_001291419 (OMIM: 607384) mitochondrial import inner (60 aa) initn: 301 init1: 301 opt: 301 Z-score: 419.6 bits: 81.6 E(85289): 1.2e-16 Smith-Waterman score: 327; 67.4% identity (67.4% similar) in 89 aa overlap (1-89:1-60) 10 20 30 40 50 60 pF1KE6 MAAQIPESDQIKQFKEFLGTYNKLTETCFLDCVKDFTTREVKPEETTCSEHCLQKYLKMT ::::::::::::::::::::::::::::::::::::::::::::: NP_001 MAAQIPESDQIKQFKEFLGTYNKLTETCFLDCVKDFTTREVKPEE--------------- 10 20 30 40 70 80 pF1KE6 QRISMRFQEYHIQQNEALAAKAGLLGQPR ::::::::::::::: NP_001 --------------NEALAAKAGLLGQPR 50 60 >>NP_001291418 (OMIM: 607384) mitochondrial import inner (61 aa) initn: 301 init1: 301 opt: 301 Z-score: 419.5 bits: 81.6 E(85289): 1.3e-16 Smith-Waterman score: 336; 68.5% identity (68.5% similar) in 89 aa overlap (1-89:1-61) 10 20 30 40 50 60 pF1KE6 MAAQIPESDQIKQFKEFLGTYNKLTETCFLDCVKDFTTREVKPEETTCSEHCLQKYLKMT ::::::::::::::::::::::::::::::::::::::::::::: NP_001 MAAQIPESDQIKQFKEFLGTYNKLTETCFLDCVKDFTTREVKPEE--------------- 10 20 30 40 70 80 pF1KE6 QRISMRFQEYHIQQNEALAAKAGLLGQPR :::::::::::::::: NP_001 -------------QNEALAAKAGLLGQPR 50 60 >>NP_001291417 (OMIM: 607384) mitochondrial import inner (66 aa) initn: 301 init1: 301 opt: 301 Z-score: 418.9 bits: 81.6 E(85289): 1.3e-16 Smith-Waterman score: 382; 74.2% identity (74.2% similar) in 89 aa overlap (1-89:1-66) 10 20 30 40 50 60 pF1KE6 MAAQIPESDQIKQFKEFLGTYNKLTETCFLDCVKDFTTREVKPEETTCSEHCLQKYLKMT ::::::::::::::::::::::::::::::::::::::::::::: NP_001 MAAQIPESDQIKQFKEFLGTYNKLTETCFLDCVKDFTTREVKPEE--------------- 10 20 30 40 70 80 pF1KE6 QRISMRFQEYHIQQNEALAAKAGLLGQPR ::::::::::::::::::::: NP_001 --------EYHIQQNEALAAKAGLLGQPR 50 60 >>NP_036324 (OMIM: 607388) mitochondrial import inner me (103 aa) initn: 134 init1: 120 opt: 147 Z-score: 210.4 bits: 43.7 E(85289): 5.6e-05 Smith-Waterman score: 147; 31.7% identity (66.7% similar) in 63 aa overlap (1-63:1-63) 10 20 30 40 50 60 pF1KE6 MAAQIPESDQIKQFKEFLGTYNKLTETCFLDCVKDFTTREVKPEETTCSEHCLQKYLKMT : : ...:......:: .::..:: :: :: .. : . :: .: . : : .. . NP_036 MERQQQQQQQLRNLRDFLLVYNRMTELCFQRCVPSLHHRALDAEEEACLHSCAGKLIHSN 10 20 30 40 50 60 70 80 pF1KE6 QRISMRFQEYHIQQNEALAAKAGLLGQPR .:. NP_036 HRLMAAYVQLMPALVQRRIADYEAASAVPGVAAEQPGVSPSGS 70 80 90 100 >>NP_036588 (OMIM: 602251) mitochondrial import inner me (90 aa) initn: 94 init1: 51 opt: 124 Z-score: 180.5 bits: 38.0 E(85289): 0.0026 Smith-Waterman score: 124; 28.8% identity (66.1% similar) in 59 aa overlap (21-78:22-80) 10 20 30 40 50 pF1KE6 MAAQIPESDQIKQFKEFLGTYNKLTETCFLDCVKD-FTTREVKPEETTCSEHCLQKYLK ::..: .: :: . :.. :..: ..:..::: NP_036 MDPLRAQQLAAELEVEMMADMYNRMTSACHRKCVPPHYKEAELSKGESVCLDRCVSKYLD 10 20 30 40 50 60 60 70 80 pF1KE6 MTQRISMRFQEYHIQQNEALAAKAGLLGQPR . .:.. .. : .:..: . NP_036 IHERMGKKLTELSMQDEELMKRVQQSSGPA 70 80 90 89 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 09:59:47 2016 done: Tue Nov 8 09:59:48 2016 Total Scan time: 3.020 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]