FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6164, 89 aa 1>>>pF1KE6164 89 - 89 aa - 89 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.1846+/-0.000617; mu= 8.8807+/- 0.037 mean_var=55.3233+/-10.796, 0's: 0 Z-trim(110.3): 7 B-trim: 0 in 0/52 Lambda= 0.172433 statistics sampled from 11506 (11511) to 11506 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.766), E-opt: 0.2 (0.354), width: 16 Scan time: 1.050 The best scores are: opt bits E(32554) CCDS9735.1 TIMM9 gene_id:26520|Hs108|chr14 ( 89) 597 155.8 3.2e-39 CCDS76685.1 TIMM9 gene_id:26520|Hs108|chr14 ( 66) 301 82.1 3.6e-17 >>CCDS9735.1 TIMM9 gene_id:26520|Hs108|chr14 (89 aa) initn: 597 init1: 597 opt: 597 Z-score: 817.5 bits: 155.8 E(32554): 3.2e-39 Smith-Waterman score: 597; 100.0% identity (100.0% similar) in 89 aa overlap (1-89:1-89) 10 20 30 40 50 60 pF1KE6 MAAQIPESDQIKQFKEFLGTYNKLTETCFLDCVKDFTTREVKPEETTCSEHCLQKYLKMT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS97 MAAQIPESDQIKQFKEFLGTYNKLTETCFLDCVKDFTTREVKPEETTCSEHCLQKYLKMT 10 20 30 40 50 60 70 80 pF1KE6 QRISMRFQEYHIQQNEALAAKAGLLGQPR ::::::::::::::::::::::::::::: CCDS97 QRISMRFQEYHIQQNEALAAKAGLLGQPR 70 80 >>CCDS76685.1 TIMM9 gene_id:26520|Hs108|chr14 (66 aa) initn: 301 init1: 301 opt: 301 Z-score: 421.6 bits: 82.1 E(32554): 3.6e-17 Smith-Waterman score: 382; 74.2% identity (74.2% similar) in 89 aa overlap (1-89:1-66) 10 20 30 40 50 60 pF1KE6 MAAQIPESDQIKQFKEFLGTYNKLTETCFLDCVKDFTTREVKPEETTCSEHCLQKYLKMT ::::::::::::::::::::::::::::::::::::::::::::: CCDS76 MAAQIPESDQIKQFKEFLGTYNKLTETCFLDCVKDFTTREVKPEE--------------- 10 20 30 40 70 80 pF1KE6 QRISMRFQEYHIQQNEALAAKAGLLGQPR ::::::::::::::::::::: CCDS76 --------EYHIQQNEALAAKAGLLGQPR 50 60 89 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 09:59:47 2016 done: Tue Nov 8 09:59:47 2016 Total Scan time: 1.050 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]