FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE3965, 332 aa 1>>>pF1KE3965 332 - 332 aa - 332 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.5212+/-0.00101; mu= 16.2081+/- 0.061 mean_var=99.0693+/-20.716, 0's: 0 Z-trim(106.8): 64 B-trim: 493 in 1/48 Lambda= 0.128856 statistics sampled from 9160 (9220) to 9160 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.658), E-opt: 0.2 (0.283), width: 16 Scan time: 2.250 The best scores are: opt bits E(32554) CCDS9719.1 CGRRF1 gene_id:10668|Hs108|chr14 ( 332) 2246 428.0 5.3e-120 >>CCDS9719.1 CGRRF1 gene_id:10668|Hs108|chr14 (332 aa) initn: 2246 init1: 2246 opt: 2246 Z-score: 2267.9 bits: 428.0 E(32554): 5.3e-120 Smith-Waterman score: 2246; 99.7% identity (100.0% similar) in 332 aa overlap (1-332:1-332) 10 20 30 40 50 60 pF1KE3 MAAVFLVTLYEYSPLFYIAVVFTCFIVTTGLVLGWFGWDVPVILRNSEETQFSTRVFKKQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS97 MAAVFLVTLYEYSPLFYIAVVFTCFIVTTGLVLGWFGWDVPVILRNSEETQFSTRVFKKQ 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 MRQVKNPFGLEITNPSSASITTGITLTTDCLEDSLLTCYWGCNVQKLYEALQKHVYCFRI ::::::::::::::::::::::::::::::::::::::::::.::::::::::::::::: CCDS97 MRQVKNPFGLEITNPSSASITTGITLTTDCLEDSLLTCYWGCSVQKLYEALQKHVYCFRI 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 STPQALEDALYSEYLYQEQYFIKKDSKEEIYCQLPRDTKIEDFGTVPRSRYPLVALLTLA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS97 STPQALEDALYSEYLYQEQYFIKKDSKEEIYCQLPRDTKIEDFGTVPRSRYPLVALLTLA 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 DEDDREIYDIISMVSVIHIPDRTYKLSCRILYQYLLLAQGQFHDLKQLFMSANNNFTPSN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS97 DEDDREIYDIISMVSVIHIPDRTYKLSCRILYQYLLLAQGQFHDLKQLFMSANNNFTPSN 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE3 NSSSEEKNTDRSLLEKVGLSESEVEPSEENSKDCVVCQNGTVNWVLLPCRHTCLCDGCVK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS97 NSSSEEKNTDRSLLEKVGLSESEVEPSEENSKDCVVCQNGTVNWVLLPCRHTCLCDGCVK 250 260 270 280 290 300 310 320 330 pF1KE3 YFQQCPMCRQFVQESFALCSQKEQDKDKPKTL :::::::::::::::::::::::::::::::: CCDS97 YFQQCPMCRQFVQESFALCSQKEQDKDKPKTL 310 320 330 332 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 08:30:08 2016 done: Sun Nov 6 08:30:08 2016 Total Scan time: 2.250 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]