Result of FASTA (omim) for
pFN21AE0602
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE0602, 358 aa
1>>>pF1KE0602 358 - 358 aa - 358 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 9.4638+/-0.00066; mu= -3.2804+/- 0.039
mean_var=707.1545+/-158.153, 0's: 0 Z-trim(114.8): 1607 B-trim: 0 in 0/54
Lambda= 0.048230
statistics sampled from 22686 (24919) to 22686 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.668), E-opt: 0.2 (0.292), width: 16
Scan time: 8.060
The best scores are: opt bits E(85289)
NP_004187 (OMIM: 603441) cyclin-dependent kinase-l ( 358) 2464 187.4 4.3e-47
XP_016877218 (OMIM: 603441) PREDICTED: cyclin-depe ( 358) 2464 187.4 4.3e-47
XP_005268214 (OMIM: 603441) PREDICTED: cyclin-depe ( 358) 2464 187.4 4.3e-47
XP_011535578 (OMIM: 603441) PREDICTED: cyclin-depe ( 308) 2101 162.0 1.6e-39
XP_016877221 (OMIM: 603441) PREDICTED: cyclin-depe ( 279) 1837 143.6 5.2e-34
NP_001269165 (OMIM: 603441) cyclin-dependent kinas ( 276) 1834 143.3 6e-34
XP_016877220 (OMIM: 603441) PREDICTED: cyclin-depe ( 301) 1834 143.4 6.2e-34
XP_005268216 (OMIM: 603441) PREDICTED: cyclin-depe ( 301) 1834 143.4 6.2e-34
XP_016877219 (OMIM: 603441) PREDICTED: cyclin-depe ( 301) 1834 143.4 6.2e-34
XP_005268217 (OMIM: 603441) PREDICTED: cyclin-depe ( 244) 1641 129.8 6.2e-30
XP_016864300 (OMIM: 603442) PREDICTED: cyclin-depe ( 479) 1260 103.8 8.1e-22
XP_016864299 (OMIM: 603442) PREDICTED: cyclin-depe ( 493) 1260 103.9 8.2e-22
NP_003939 (OMIM: 603442) cyclin-dependent kinase-l ( 493) 1260 103.9 8.2e-22
XP_006714469 (OMIM: 603442) PREDICTED: cyclin-depe ( 530) 1260 103.9 8.5e-22
XP_016864298 (OMIM: 603442) PREDICTED: cyclin-depe ( 570) 1260 104.0 8.8e-22
NP_001317653 (OMIM: 603442) cyclin-dependent kinas ( 570) 1260 104.0 8.8e-22
NP_057592 (OMIM: 608459) cyclin-dependent kinase-l ( 455) 1038 88.3 3.5e-17
NP_001107047 (OMIM: 608459) cyclin-dependent kinas ( 592) 1038 88.6 4e-17
XP_016865024 (OMIM: 608459) PREDICTED: cyclin-depe ( 592) 1038 88.6 4e-17
XP_016865021 (OMIM: 608459) PREDICTED: cyclin-depe ( 607) 1038 88.6 4e-17
NP_001310218 (OMIM: 300203,300672) cyclin-dependen ( 960) 976 84.6 9.9e-16
NP_003150 (OMIM: 300203,300672) cyclin-dependent k (1030) 976 84.7 1e-15
NP_001032420 (OMIM: 300203,300672) cyclin-dependen (1030) 976 84.7 1e-15
XP_016865016 (OMIM: 608459) PREDICTED: cyclin-depe ( 622) 958 83.0 1.9e-15
NP_001249 (OMIM: 123828) cyclin-dependent kinase 3 ( 305) 794 71.1 3.8e-12
NP_001307847 (OMIM: 116940) cyclin-dependent kinas ( 297) 766 69.1 1.4e-11
NP_001777 (OMIM: 116940) cyclin-dependent kinase 1 ( 297) 766 69.1 1.4e-11
XP_005270360 (OMIM: 116940) PREDICTED: cyclin-depe ( 297) 766 69.1 1.4e-11
NP_001789 (OMIM: 116953) cyclin-dependent kinase 2 ( 298) 762 68.8 1.8e-11
NP_004926 (OMIM: 123831,616342) cyclin-dependent-l ( 292) 761 68.7 1.8e-11
XP_016865037 (OMIM: 608459) PREDICTED: cyclin-depe ( 307) 745 67.6 4.1e-11
XP_016865025 (OMIM: 608459) PREDICTED: cyclin-depe ( 538) 745 68.1 5.2e-11
XP_016865023 (OMIM: 608459) PREDICTED: cyclin-depe ( 602) 745 68.2 5.5e-11
XP_016865022 (OMIM: 608459) PREDICTED: cyclin-depe ( 604) 745 68.2 5.5e-11
XP_016865019 (OMIM: 608459) PREDICTED: cyclin-depe ( 617) 745 68.2 5.6e-11
XP_016865020 (OMIM: 608459) PREDICTED: cyclin-depe ( 617) 745 68.2 5.6e-11
XP_011541731 (OMIM: 608459) PREDICTED: cyclin-depe ( 619) 745 68.2 5.6e-11
XP_016865018 (OMIM: 608459) PREDICTED: cyclin-depe ( 619) 745 68.2 5.6e-11
XP_016865017 (OMIM: 608459) PREDICTED: cyclin-depe ( 619) 745 68.2 5.6e-11
XP_016865015 (OMIM: 608459) PREDICTED: cyclin-depe ( 634) 745 68.2 5.6e-11
XP_016865014 (OMIM: 608459) PREDICTED: cyclin-depe ( 634) 745 68.2 5.6e-11
XP_016865013 (OMIM: 608459) PREDICTED: cyclin-depe ( 634) 745 68.2 5.6e-11
NP_001790 (OMIM: 601955) cyclin-dependent kinase 7 ( 346) 695 64.3 4.8e-10
XP_016865980 (OMIM: 612325,612651) PREDICTED: seri ( 632) 700 65.1 4.9e-10
NP_057597 (OMIM: 612325,612651) serine/threonine-p ( 632) 700 65.1 4.9e-10
XP_016865977 (OMIM: 612325,612651) PREDICTED: seri ( 632) 700 65.1 4.9e-10
XP_016865979 (OMIM: 612325,612651) PREDICTED: seri ( 632) 700 65.1 4.9e-10
XP_016865978 (OMIM: 612325,612651) PREDICTED: seri ( 632) 700 65.1 4.9e-10
NP_055735 (OMIM: 612325,612651) serine/threonine-p ( 632) 700 65.1 4.9e-10
XP_016865981 (OMIM: 612325,612651) PREDICTED: seri ( 632) 700 65.1 4.9e-10
>>NP_004187 (OMIM: 603441) cyclin-dependent kinase-like (358 aa)
initn: 2464 init1: 2464 opt: 2464 Z-score: 966.5 bits: 187.4 E(85289): 4.3e-47
Smith-Waterman score: 2464; 99.7% identity (100.0% similar) in 358 aa overlap (1-358:1-358)
10 20 30 40 50 60
pF1KE0 MMEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 MMEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 HPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 HPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 HNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYTDYVATRWYRSPELLVGDTQY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 HNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYTDYVATRWYRSPELLVGDTQY
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 GPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 GPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE0 IPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTQRLTCEQLLHHPYFENIREIEDLAKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 IPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTQRLTCEQLLHHPYFENIREIEDLAKE
250 260 270 280 290 300
310 320 330 340 350
pF1KE0 HNKPTRKTLRKSRKHHCFTETSKLQYLPQVTGSSILPALDNKKYYCDTKKLNYRFPNI
:::::::::::::::::::::::::::::.::::::::::::::::::::::::::::
NP_004 HNKPTRKTLRKSRKHHCFTETSKLQYLPQLTGSSILPALDNKKYYCDTKKLNYRFPNI
310 320 330 340 350
>>XP_016877218 (OMIM: 603441) PREDICTED: cyclin-dependen (358 aa)
initn: 2464 init1: 2464 opt: 2464 Z-score: 966.5 bits: 187.4 E(85289): 4.3e-47
Smith-Waterman score: 2464; 99.7% identity (100.0% similar) in 358 aa overlap (1-358:1-358)
10 20 30 40 50 60
pF1KE0 MMEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MMEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 HPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 HNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYTDYVATRWYRSPELLVGDTQY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYTDYVATRWYRSPELLVGDTQY
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 GPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE0 IPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTQRLTCEQLLHHPYFENIREIEDLAKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 IPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTQRLTCEQLLHHPYFENIREIEDLAKE
250 260 270 280 290 300
310 320 330 340 350
pF1KE0 HNKPTRKTLRKSRKHHCFTETSKLQYLPQVTGSSILPALDNKKYYCDTKKLNYRFPNI
:::::::::::::::::::::::::::::.::::::::::::::::::::::::::::
XP_016 HNKPTRKTLRKSRKHHCFTETSKLQYLPQLTGSSILPALDNKKYYCDTKKLNYRFPNI
310 320 330 340 350
>>XP_005268214 (OMIM: 603441) PREDICTED: cyclin-dependen (358 aa)
initn: 2464 init1: 2464 opt: 2464 Z-score: 966.5 bits: 187.4 E(85289): 4.3e-47
Smith-Waterman score: 2464; 99.7% identity (100.0% similar) in 358 aa overlap (1-358:1-358)
10 20 30 40 50 60
pF1KE0 MMEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MMEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 HPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 HPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 HNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYTDYVATRWYRSPELLVGDTQY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 HNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYTDYVATRWYRSPELLVGDTQY
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 GPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE0 IPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTQRLTCEQLLHHPYFENIREIEDLAKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 IPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTQRLTCEQLLHHPYFENIREIEDLAKE
250 260 270 280 290 300
310 320 330 340 350
pF1KE0 HNKPTRKTLRKSRKHHCFTETSKLQYLPQVTGSSILPALDNKKYYCDTKKLNYRFPNI
:::::::::::::::::::::::::::::.::::::::::::::::::::::::::::
XP_005 HNKPTRKTLRKSRKHHCFTETSKLQYLPQLTGSSILPALDNKKYYCDTKKLNYRFPNI
310 320 330 340 350
>>XP_011535578 (OMIM: 603441) PREDICTED: cyclin-dependen (308 aa)
initn: 2101 init1: 2101 opt: 2101 Z-score: 830.5 bits: 162.0 E(85289): 1.6e-39
Smith-Waterman score: 2101; 99.3% identity (99.7% similar) in 303 aa overlap (56-358:6-308)
30 40 50 60 70 80
pF1KE0 DTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYCD
: ::::::::::::::::::::::::::::
XP_011 MKPQTLAQLKHPNLVNLLEVFRRKRRLHLVFEYCD
10 20 30
90 100 110 120 130 140
pF1KE0 HTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILITKHSVIKLCD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 HTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILITKHSVIKLCD
40 50 60 70 80 90
150 160 170 180 190 200
pF1KE0 FGFARLLTGPSDYYTDYVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FGFARLLTGPSDYYTDYVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPG
100 110 120 130 140 150
210 220 230 240 250 260
pF1KE0 KSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLL
160 170 180 190 200 210
270 280 290 300 310 320
pF1KE0 KGCLHMDPTQRLTCEQLLHHPYFENIREIEDLAKEHNKPTRKTLRKSRKHHCFTETSKLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KGCLHMDPTQRLTCEQLLHHPYFENIREIEDLAKEHNKPTRKTLRKSRKHHCFTETSKLQ
220 230 240 250 260 270
330 340 350
pF1KE0 YLPQVTGSSILPALDNKKYYCDTKKLNYRFPNI
::::.::::::::::::::::::::::::::::
XP_011 YLPQLTGSSILPALDNKKYYCDTKKLNYRFPNI
280 290 300
>>XP_016877221 (OMIM: 603441) PREDICTED: cyclin-dependen (279 aa)
initn: 1826 init1: 1826 opt: 1837 Z-score: 731.6 bits: 143.6 E(85289): 5.2e-34
Smith-Waterman score: 1837; 96.4% identity (98.6% similar) in 278 aa overlap (1-278:1-276)
10 20 30 40 50 60
pF1KE0 MMEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MMEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 HPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 HNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYTDYVATRWYRSPELLVGDTQY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYTDYVATRWYRSPELLVGDTQY
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 GPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE0 IPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTQRLTCEQLLHHPYFENIREIEDLAKE
:::::::::::::::::::::::::: .:.. ...:
XP_016 IPDPEDMEPLELKFPNISYPALGLLK--FHLSKKKKMTLIS
250 260 270
310 320 330 340 350
pF1KE0 HNKPTRKTLRKSRKHHCFTETSKLQYLPQVTGSSILPALDNKKYYCDTKKLNYRFPNI
>>NP_001269165 (OMIM: 603441) cyclin-dependent kinase-li (276 aa)
initn: 1834 init1: 1834 opt: 1834 Z-score: 730.5 bits: 143.3 E(85289): 6e-34
Smith-Waterman score: 1834; 100.0% identity (100.0% similar) in 267 aa overlap (1-267:1-267)
10 20 30 40 50 60
pF1KE0 MMEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MMEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 HPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 HNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYTDYVATRWYRSPELLVGDTQY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYTDYVATRWYRSPELLVGDTQY
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 GPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE0 IPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTQRLTCEQLLHHPYFENIREIEDLAKE
:::::::::::::::::::::::::::
NP_001 IPDPEDMEPLELKFPNISYPALGLLKGRVPIASRTE
250 260 270
>>XP_016877220 (OMIM: 603441) PREDICTED: cyclin-dependen (301 aa)
initn: 1826 init1: 1826 opt: 1834 Z-score: 730.2 bits: 143.4 E(85289): 6.2e-34
Smith-Waterman score: 1936; 83.8% identity (84.1% similar) in 358 aa overlap (1-358:1-301)
10 20 30 40 50 60
pF1KE0 MMEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MMEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 HPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 HNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYTDYVATRWYRSPELLVGDTQY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYTDYVATRWYRSPELLVGDTQY
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 GPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE0 IPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTQRLTCEQLLHHPYFENIREIEDLAKE
::::::::::::::::::::::::::
XP_016 IPDPEDMEPLELKFPNISYPALGLLK----------------------------------
250 260
310 320 330 340 350
pF1KE0 HNKPTRKTLRKSRKHHCFTETSKLQYLPQVTGSSILPALDNKKYYCDTKKLNYRFPNI
::::::.::::::::::::::::::::::::::::
XP_016 -----------------------LQYLPQLTGSSILPALDNKKYYCDTKKLNYRFPNI
270 280 290 300
>>XP_005268216 (OMIM: 603441) PREDICTED: cyclin-dependen (301 aa)
initn: 1826 init1: 1826 opt: 1834 Z-score: 730.2 bits: 143.4 E(85289): 6.2e-34
Smith-Waterman score: 1936; 83.8% identity (84.1% similar) in 358 aa overlap (1-358:1-301)
10 20 30 40 50 60
pF1KE0 MMEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MMEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 HPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 HPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 HNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYTDYVATRWYRSPELLVGDTQY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 HNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYTDYVATRWYRSPELLVGDTQY
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 GPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE0 IPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTQRLTCEQLLHHPYFENIREIEDLAKE
::::::::::::::::::::::::::
XP_005 IPDPEDMEPLELKFPNISYPALGLLK----------------------------------
250 260
310 320 330 340 350
pF1KE0 HNKPTRKTLRKSRKHHCFTETSKLQYLPQVTGSSILPALDNKKYYCDTKKLNYRFPNI
::::::.::::::::::::::::::::::::::::
XP_005 -----------------------LQYLPQLTGSSILPALDNKKYYCDTKKLNYRFPNI
270 280 290 300
>>XP_016877219 (OMIM: 603441) PREDICTED: cyclin-dependen (301 aa)
initn: 1826 init1: 1826 opt: 1834 Z-score: 730.2 bits: 143.4 E(85289): 6.2e-34
Smith-Waterman score: 1936; 83.8% identity (84.1% similar) in 358 aa overlap (1-358:1-301)
10 20 30 40 50 60
pF1KE0 MMEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MMEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 HPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 HNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYTDYVATRWYRSPELLVGDTQY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYTDYVATRWYRSPELLVGDTQY
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 GPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE0 IPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTQRLTCEQLLHHPYFENIREIEDLAKE
::::::::::::::::::::::::::
XP_016 IPDPEDMEPLELKFPNISYPALGLLK----------------------------------
250 260
310 320 330 340 350
pF1KE0 HNKPTRKTLRKSRKHHCFTETSKLQYLPQVTGSSILPALDNKKYYCDTKKLNYRFPNI
::::::.::::::::::::::::::::::::::::
XP_016 -----------------------LQYLPQLTGSSILPALDNKKYYCDTKKLNYRFPNI
270 280 290 300
>>XP_005268217 (OMIM: 603441) PREDICTED: cyclin-dependen (244 aa)
initn: 1641 init1: 1641 opt: 1641 Z-score: 658.4 bits: 129.8 E(85289): 6.2e-30
Smith-Waterman score: 1641; 99.6% identity (100.0% similar) in 236 aa overlap (123-358:9-244)
100 110 120 130 140 150
pF1KE0 DRYQRGVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILITKHSVIKLCDFGFARLL
::::::::::::::::::::::::::::::
XP_005 MIQALTGMCIHRDVKPENILITKHSVIKLCDFGFARLL
10 20 30
160 170 180 190 200 210
pF1KE0 TGPSDYYTDYVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 TGPSDYYTDYVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQL
40 50 60 70 80 90
220 230 240 250 260 270
pF1KE0 YLIRKTLGDLIPRHQQVFSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 YLIRKTLGDLIPRHQQVFSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMD
100 110 120 130 140 150
280 290 300 310 320 330
pF1KE0 PTQRLTCEQLLHHPYFENIREIEDLAKEHNKPTRKTLRKSRKHHCFTETSKLQYLPQVTG
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::.::
XP_005 PTQRLTCEQLLHHPYFENIREIEDLAKEHNKPTRKTLRKSRKHHCFTETSKLQYLPQLTG
160 170 180 190 200 210
340 350
pF1KE0 SSILPALDNKKYYCDTKKLNYRFPNI
::::::::::::::::::::::::::
XP_005 SSILPALDNKKYYCDTKKLNYRFPNI
220 230 240
358 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 14:26:51 2016 done: Sun Nov 6 14:26:53 2016
Total Scan time: 8.060 Total Display time: 0.020
Function used was FASTA [36.3.4 Apr, 2011]