FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE3031, 156 aa 1>>>pF1KE3031 156 - 156 aa - 156 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 4.6632+/-0.00043; mu= 14.3860+/- 0.026 mean_var=54.4024+/-10.868, 0's: 0 Z-trim(109.6): 48 B-trim: 33 in 1/48 Lambda= 0.173886 statistics sampled from 17766 (17806) to 17766 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.566), E-opt: 0.2 (0.209), width: 16 Scan time: 4.950 The best scores are: opt bits E(85289) NP_612469 (OMIM: 607888) CKLF-like MARVEL transmem ( 156) 998 258.5 3.1e-69 XP_016876442 (OMIM: 607888) PREDICTED: CKLF-like M ( 156) 998 258.5 3.1e-69 XP_016876443 (OMIM: 607888) PREDICTED: CKLF-like M ( 156) 998 258.5 3.1e-69 NP_001032365 (OMIM: 607888) CKLF-like MARVEL trans ( 125) 607 160.4 8.9e-40 NP_001275675 (OMIM: 607888) CKLF-like MARVEL trans ( 223) 603 159.5 2.8e-39 NP_001275673 (OMIM: 607888) CKLF-like MARVEL trans ( 105) 400 108.4 3.3e-24 NP_853531 (OMIM: 607886) CKLF-like MARVEL transmem ( 182) 336 92.5 3.5e-19 XP_006721194 (OMIM: 607886) PREDICTED: CKLF-like M ( 182) 336 92.5 3.5e-19 NP_653202 (OMIM: 607886) CKLF-like MARVEL transmem ( 182) 336 92.5 3.5e-19 NP_001275674 (OMIM: 607888) CKLF-like MARVEL trans ( 74) 278 77.7 4.1e-15 NP_002659 (OMIM: 300112) proteolipid protein 2 [Ho ( 152) 255 72.1 4e-13 XP_011521163 (OMIM: 607886) PREDICTED: CKLF-like M ( 150) 188 55.3 4.5e-08 XP_011521184 (OMIM: 607887) PREDICTED: CKLF-like M ( 179) 144 44.3 0.00011 NP_852662 (OMIM: 607887) CKLF-like MARVEL transmem ( 208) 144 44.4 0.00012 XP_016878443 (OMIM: 607887) PREDICTED: CKLF-like M ( 221) 144 44.4 0.00013 NP_848933 (OMIM: 607887) CKLF-like MARVEL transmem ( 234) 144 44.4 0.00014 NP_612419 (OMIM: 607890) CKLF-like MARVEL transmem ( 175) 141 43.6 0.00018 XP_011531621 (OMIM: 607890) PREDICTED: CKLF-like M ( 151) 130 40.8 0.0011 NP_849199 (OMIM: 607891) CKLF-like MARVEL transmem ( 173) 130 40.8 0.0012 XP_016861135 (OMIM: 607890) PREDICTED: CKLF-like M ( 179) 130 40.8 0.0012 NP_057077 (OMIM: 600340) plasmolipin [Homo sapiens ( 182) 127 40.0 0.0021 NP_058647 (OMIM: 616074) chemokine-like factor iso ( 152) 122 38.7 0.0044 NP_443725 (OMIM: 607884) CKLF-like MARVEL transmem ( 286) 123 39.2 0.0062 NP_851785 (OMIM: 607884) CKLF-like MARVEL transmem ( 231) 121 38.6 0.0073 >>NP_612469 (OMIM: 607888) CKLF-like MARVEL transmembran (156 aa) initn: 998 init1: 998 opt: 998 Z-score: 1363.9 bits: 258.5 E(85289): 3.1e-69 Smith-Waterman score: 998; 100.0% identity (100.0% similar) in 156 aa overlap (1-156:1-156) 10 20 30 40 50 60 pF1KE3 MLSARDRRDRHPEEGVVAELQGFAVDKAFLTSHKGILLETELALTLIIFICFTASISAYM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_612 MLSARDRRDRHPEEGVVAELQGFAVDKAFLTSHKGILLETELALTLIIFICFTASISAYM 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 AAALLEFFITLAFLFLYATQYYQRFDRINWPCLDFLRCVSAIIIFLVVSFAAVTSRDGAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_612 AAALLEFFITLAFLFLYATQYYQRFDRINWPCLDFLRCVSAIIIFLVVSFAAVTSRDGAA 70 80 90 100 110 120 130 140 150 pF1KE3 IAAFVFGIILVSIFAYDAFKIYRTEMAPGASQGDQQ :::::::::::::::::::::::::::::::::::: NP_612 IAAFVFGIILVSIFAYDAFKIYRTEMAPGASQGDQQ 130 140 150 >>XP_016876442 (OMIM: 607888) PREDICTED: CKLF-like MARVE (156 aa) initn: 998 init1: 998 opt: 998 Z-score: 1363.9 bits: 258.5 E(85289): 3.1e-69 Smith-Waterman score: 998; 100.0% identity (100.0% similar) in 156 aa overlap (1-156:1-156) 10 20 30 40 50 60 pF1KE3 MLSARDRRDRHPEEGVVAELQGFAVDKAFLTSHKGILLETELALTLIIFICFTASISAYM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 MLSARDRRDRHPEEGVVAELQGFAVDKAFLTSHKGILLETELALTLIIFICFTASISAYM 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 AAALLEFFITLAFLFLYATQYYQRFDRINWPCLDFLRCVSAIIIFLVVSFAAVTSRDGAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 AAALLEFFITLAFLFLYATQYYQRFDRINWPCLDFLRCVSAIIIFLVVSFAAVTSRDGAA 70 80 90 100 110 120 130 140 150 pF1KE3 IAAFVFGIILVSIFAYDAFKIYRTEMAPGASQGDQQ :::::::::::::::::::::::::::::::::::: XP_016 IAAFVFGIILVSIFAYDAFKIYRTEMAPGASQGDQQ 130 140 150 >>XP_016876443 (OMIM: 607888) PREDICTED: CKLF-like MARVE (156 aa) initn: 998 init1: 998 opt: 998 Z-score: 1363.9 bits: 258.5 E(85289): 3.1e-69 Smith-Waterman score: 998; 100.0% identity (100.0% similar) in 156 aa overlap (1-156:1-156) 10 20 30 40 50 60 pF1KE3 MLSARDRRDRHPEEGVVAELQGFAVDKAFLTSHKGILLETELALTLIIFICFTASISAYM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 MLSARDRRDRHPEEGVVAELQGFAVDKAFLTSHKGILLETELALTLIIFICFTASISAYM 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 AAALLEFFITLAFLFLYATQYYQRFDRINWPCLDFLRCVSAIIIFLVVSFAAVTSRDGAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 AAALLEFFITLAFLFLYATQYYQRFDRINWPCLDFLRCVSAIIIFLVVSFAAVTSRDGAA 70 80 90 100 110 120 130 140 150 pF1KE3 IAAFVFGIILVSIFAYDAFKIYRTEMAPGASQGDQQ :::::::::::::::::::::::::::::::::::: XP_016 IAAFVFGIILVSIFAYDAFKIYRTEMAPGASQGDQQ 130 140 150 >>NP_001032365 (OMIM: 607888) CKLF-like MARVEL transmemb (125 aa) initn: 607 init1: 607 opt: 607 Z-score: 835.1 bits: 160.4 E(85289): 8.9e-40 Smith-Waterman score: 738; 80.1% identity (80.1% similar) in 156 aa overlap (1-156:1-125) 10 20 30 40 50 60 pF1KE3 MLSARDRRDRHPEEGVVAELQGFAVDKAFLTSHKGILLETELALTLIIFICFTASISAYM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MLSARDRRDRHPEEGVVAELQGFAVDKAFLTSHKGILLETELALTLIIFICFTASISAYM 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 AAALLEFFITLAFLFLYATQYYQRFDRINWPCLDFLRCVSAIIIFLVVSFAAVTSRDGAA ::::::::::::::::::::::::::::::::: NP_001 AAALLEFFITLAFLFLYATQYYQRFDRINWPCL--------------------------- 70 80 90 130 140 150 pF1KE3 IAAFVFGIILVSIFAYDAFKIYRTEMAPGASQGDQQ :::::::::::::::::::::::::::::::: NP_001 ----VFGIILVSIFAYDAFKIYRTEMAPGASQGDQQ 100 110 120 >>NP_001275675 (OMIM: 607888) CKLF-like MARVEL transmemb (223 aa) initn: 984 init1: 603 opt: 603 Z-score: 826.1 bits: 159.5 E(85289): 2.8e-39 Smith-Waterman score: 629; 64.4% identity (64.4% similar) in 188 aa overlap (1-121:1-188) 10 20 30 40 50 60 pF1KE3 MLSARDRRDRHPEEGVVAELQGFAVDKAFLTSHKGILLETELALTLIIFICFTASISAYM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MLSARDRRDRHPEEGVVAELQGFAVDKAFLTSHKGILLETELALTLIIFICFTASISAYM 10 20 30 40 50 60 70 80 90 pF1KE3 AAALLEFFITLAFLFLYATQYYQRFDRINWPCL--------------------------- ::::::::::::::::::::::::::::::::: NP_001 AAALLEFFITLAFLFLYATQYYQRFDRINWPCLLQGHGQSGGPHPLDLLSHSAKVQPQPW 70 80 90 100 110 120 100 110 pF1KE3 ----------------------------------------DFLRCVSAIIIFLVVSFAAV :::::::::::::::::::: NP_001 PGLTPPGWHTPAAVPWVPAPAPGFWSWLLWFICFHSLGSSDFLRCVSAIIIFLVVSFAAV 130 140 150 160 170 180 120 130 140 150 pF1KE3 TSRDGAAIAAFVFGIILVSIFAYDAFKIYRTEMAPGASQGDQQ :::::::: NP_001 TSRDGAAIAAFVFGIILVSIFAYDAFKIYRTEMAPGASQGDQQ 190 200 210 220 >-- initn: 225 init1: 225 opt: 225 Z-score: 313.6 bits: 64.7 E(85289): 1e-10 Smith-Waterman score: 225; 100.0% identity (100.0% similar) in 35 aa overlap (122-156:189-223) 100 110 120 130 140 150 pF1KE3 CLDFLRCVSAIIIFLVVSFAAVTSRDGAAIAAFVFGIILVSIFAYDAFKIYRTEMAPGAS :::::::::::::::::::::::::::::: NP_001 SSDFLRCVSAIIIFLVVSFAAVTSRDGAAIAAFVFGIILVSIFAYDAFKIYRTEMAPGAS 160 170 180 190 200 210 pF1KE3 QGDQQ ::::: NP_001 QGDQQ 220 >>NP_001275673 (OMIM: 607888) CKLF-like MARVEL transmemb (105 aa) initn: 400 init1: 400 opt: 400 Z-score: 555.6 bits: 108.4 E(85289): 3.3e-24 Smith-Waterman score: 551; 67.3% identity (67.3% similar) in 156 aa overlap (1-156:1-105) 10 20 30 40 50 60 pF1KE3 MLSARDRRDRHPEEGVVAELQGFAVDKAFLTSHKGILLETELALTLIIFICFTASISAYM :::::::::::::::::::::::::::::::::::::::::: NP_001 MLSARDRRDRHPEEGVVAELQGFAVDKAFLTSHKGILLETEL------------------ 10 20 30 40 70 80 90 100 110 120 pF1KE3 AAALLEFFITLAFLFLYATQYYQRFDRINWPCLDFLRCVSAIIIFLVVSFAAVTSRDGAA ::::::::::::::::::::::::::: NP_001 ---------------------------------DFLRCVSAIIIFLVVSFAAVTSRDGAA 50 60 130 140 150 pF1KE3 IAAFVFGIILVSIFAYDAFKIYRTEMAPGASQGDQQ :::::::::::::::::::::::::::::::::::: NP_001 IAAFVFGIILVSIFAYDAFKIYRTEMAPGASQGDQQ 70 80 90 100 >>NP_853531 (OMIM: 607886) CKLF-like MARVEL transmembran (182 aa) initn: 204 init1: 204 opt: 336 Z-score: 465.4 bits: 92.5 E(85289): 3.5e-19 Smith-Waterman score: 336; 42.1% identity (73.6% similar) in 140 aa overlap (17-154:24-162) 10 20 30 40 50 pF1KE3 MLSARDRRDRHPEEGVVAELQGFAVDKAFLTSHKGILLETELALTLIIFICFT : :... .::: : :: :: .: .:..: :::.. NP_853 MWPPDPDPDPDPEPAGGSRPGPAVPGLRALLPARAFLCSLKGRLLLAESGLSFITFICYV 10 20 30 40 50 60 60 70 80 90 100 110 pF1KE3 AS-ISAYMAAALLEFFITLAFLFLYATQYYQRFDRINWPCLDFLRCVSAIIIFLVVSFAA :: ::...: ::::...: ::: : : .... . :: .::::::.: .:....:..: NP_853 ASSASAFLTAPLLEFLLALYFLFADAMQLNDKWQGLCWPMMDFLRCVTAALIYFAISITA 70 80 90 100 110 120 120 130 140 150 pF1KE3 VTSR-DGAAIAAFVFGIILVSIFAYDAFKIYRTEMAPGASQGDQQ ... :::. :: :::.. . .:: : . :. ...: .::: NP_853 IAKYSDGASKAAGVFGFFATIVFATDFYLIF-NDVAKFLKQGDSADETTAHKTEEENSDS 130 140 150 160 170 NP_853 DSD 180 >>XP_006721194 (OMIM: 607886) PREDICTED: CKLF-like MARVE (182 aa) initn: 204 init1: 204 opt: 336 Z-score: 465.4 bits: 92.5 E(85289): 3.5e-19 Smith-Waterman score: 336; 42.1% identity (73.6% similar) in 140 aa overlap (17-154:24-162) 10 20 30 40 50 pF1KE3 MLSARDRRDRHPEEGVVAELQGFAVDKAFLTSHKGILLETELALTLIIFICFT : :... .::: : :: :: .: .:..: :::.. XP_006 MWPPDPDPDPDPEPAGGSRPGPAVPGLRALLPARAFLCSLKGRLLLAESGLSFITFICYV 10 20 30 40 50 60 60 70 80 90 100 110 pF1KE3 AS-ISAYMAAALLEFFITLAFLFLYATQYYQRFDRINWPCLDFLRCVSAIIIFLVVSFAA :: ::...: ::::...: ::: : : .... . :: .::::::.: .:....:..: XP_006 ASSASAFLTAPLLEFLLALYFLFADAMQLNDKWQGLCWPMMDFLRCVTAALIYFAISITA 70 80 90 100 110 120 120 130 140 150 pF1KE3 VTSR-DGAAIAAFVFGIILVSIFAYDAFKIYRTEMAPGASQGDQQ ... :::. :: :::.. . .:: : . :. ...: .::: XP_006 IAKYSDGASKAAGVFGFFATIVFATDFYLIF-NDVAKFLKQGDSADETTAHKTEEENSDS 130 140 150 160 170 XP_006 DSD 180 >>NP_653202 (OMIM: 607886) CKLF-like MARVEL transmembran (182 aa) initn: 204 init1: 204 opt: 336 Z-score: 465.4 bits: 92.5 E(85289): 3.5e-19 Smith-Waterman score: 336; 42.1% identity (73.6% similar) in 140 aa overlap (17-154:24-162) 10 20 30 40 50 pF1KE3 MLSARDRRDRHPEEGVVAELQGFAVDKAFLTSHKGILLETELALTLIIFICFT : :... .::: : :: :: .: .:..: :::.. NP_653 MWPPDPDPDPDPEPAGGSRPGPAVPGLRALLPARAFLCSLKGRLLLAESGLSFITFICYV 10 20 30 40 50 60 60 70 80 90 100 110 pF1KE3 AS-ISAYMAAALLEFFITLAFLFLYATQYYQRFDRINWPCLDFLRCVSAIIIFLVVSFAA :: ::...: ::::...: ::: : : .... . :: .::::::.: .:....:..: NP_653 ASSASAFLTAPLLEFLLALYFLFADAMQLNDKWQGLCWPMMDFLRCVTAALIYFAISITA 70 80 90 100 110 120 120 130 140 150 pF1KE3 VTSR-DGAAIAAFVFGIILVSIFAYDAFKIYRTEMAPGASQGDQQ ... :::. :: :::.. . .:: : . :. ...: .::: NP_653 IAKYSDGASKAAGVFGFFATIVFATDFYLIF-NDVAKFLKQGDSADETTAHKTEEENSDS 130 140 150 160 170 NP_653 DSD 180 >>NP_001275674 (OMIM: 607888) CKLF-like MARVEL transmemb (74 aa) initn: 284 init1: 276 opt: 278 Z-score: 392.4 bits: 77.7 E(85289): 4.1e-15 Smith-Waterman score: 301; 47.4% identity (47.4% similar) in 156 aa overlap (1-156:1-74) 10 20 30 40 50 60 pF1KE3 MLSARDRRDRHPEEGVVAELQGFAVDKAFLTSHKGILLETELALTLIIFICFTASISAYM :::::::::::::::::::::::::::::::::::::::::: NP_001 MLSARDRRDRHPEEGVVAELQGFAVDKAFLTSHKGILLETEL------------------ 10 20 30 40 70 80 90 100 110 120 pF1KE3 AAALLEFFITLAFLFLYATQYYQRFDRINWPCLDFLRCVSAIIIFLVVSFAAVTSRDGAA NP_001 ------------------------------------------------------------ 130 140 150 pF1KE3 IAAFVFGIILVSIFAYDAFKIYRTEMAPGASQGDQQ :::::::::::::::::::::::::::::::: NP_001 ----VFGIILVSIFAYDAFKIYRTEMAPGASQGDQQ 50 60 70 156 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 14:29:52 2016 done: Sun Nov 6 14:29:53 2016 Total Scan time: 4.950 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]