FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KB5592, 494 aa 1>>>pF1KB5592 494 - 494 aa - 494 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.1981+/-0.00124; mu= 16.2768+/- 0.075 mean_var=220.3811+/-41.990, 0's: 0 Z-trim(110.7): 169 B-trim: 45 in 1/49 Lambda= 0.086395 statistics sampled from 11613 (11798) to 11613 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.704), E-opt: 0.2 (0.362), width: 16 Scan time: 3.190 The best scores are: opt bits E(32554) CCDS9499.1 ITGBL1 gene_id:9358|Hs108|chr13 ( 494) 3968 507.9 9.8e-144 CCDS61361.1 ITGBL1 gene_id:9358|Hs108|chr13 ( 401) 3178 409.3 3.8e-114 CCDS61362.1 ITGBL1 gene_id:9358|Hs108|chr13 ( 353) 2877 371.7 7.1e-103 CCDS73594.1 ITGBL1 gene_id:9358|Hs108|chr13 ( 445) 2854 369.0 5.8e-102 CCDS13716.1 ITGB2 gene_id:3689|Hs108|chr21 ( 769) 499 75.9 1.8e-13 CCDS58599.1 ITGB4 gene_id:3691|Hs108|chr17 (1752) 492 75.5 5.1e-13 CCDS32736.1 ITGB4 gene_id:3691|Hs108|chr17 (1805) 492 75.6 5.2e-13 CCDS11727.1 ITGB4 gene_id:3691|Hs108|chr17 (1822) 492 75.6 5.2e-13 CCDS41237.1 MEGF6 gene_id:1953|Hs108|chr1 (1541) 489 75.1 6.2e-13 CCDS7174.1 ITGB1 gene_id:3688|Hs108|chr10 ( 798) 481 73.6 8.7e-13 CCDS4142.1 MEGF10 gene_id:84466|Hs108|chr5 (1140) 456 70.8 9.1e-12 CCDS11511.1 ITGB3 gene_id:3690|Hs108|chr17 ( 788) 431 67.4 6.5e-11 CCDS74597.1 ITGB6 gene_id:3694|Hs108|chr2 ( 693) 428 66.9 7.8e-11 CCDS74596.1 ITGB6 gene_id:3694|Hs108|chr2 ( 746) 428 67.0 8.2e-11 CCDS2212.1 ITGB6 gene_id:3694|Hs108|chr2 ( 788) 428 67.0 8.4e-11 >>CCDS9499.1 ITGBL1 gene_id:9358|Hs108|chr13 (494 aa) initn: 3968 init1: 3968 opt: 3968 Z-score: 2694.0 bits: 507.9 E(32554): 9.8e-144 Smith-Waterman score: 3968; 100.0% identity (100.0% similar) in 494 aa overlap (1-494:1-494) 10 20 30 40 50 60 pF1KB5 MRPPGFRNFLLLASSLLFAGLSAVPQSFSPSLRSWPGAACRLSRAESERRCRAPGQPPGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS94 MRPPGFRNFLLLASSLLFAGLSAVPQSFSPSLRSWPGAACRLSRAESERRCRAPGQPPGA 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB5 ALCHGRGRCDCGVCICHVTEPGMFFGPLCECHEWVCETYDGSTCAGHGKCDCGKCKCDQG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS94 ALCHGRGRCDCGVCICHVTEPGMFFGPLCECHEWVCETYDGSTCAGHGKCDCGKCKCDQG 70 80 90 100 110 120 130 140 150 160 170 180 pF1KB5 WYGDACQYPTNCDLTKKKSNQMCKNSQDIICSNAGTCHCGRCKCDNSDGSGLVYGKFCEC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS94 WYGDACQYPTNCDLTKKKSNQMCKNSQDIICSNAGTCHCGRCKCDNSDGSGLVYGKFCEC 130 140 150 160 170 180 190 200 210 220 230 240 pF1KB5 DDRECIDDETEEICGGHGKCYCGNCYCKAGWHGDKCEFQCDITPWESKRRCTSPDGKICS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS94 DDRECIDDETEEICGGHGKCYCGNCYCKAGWHGDKCEFQCDITPWESKRRCTSPDGKICS 190 200 210 220 230 240 250 260 270 280 290 300 pF1KB5 NRGTCVCGECTCHDVDPTGDWGDIHGDTCECDERDCRAVYDRYSDDFCSGHGQCNCGRCD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS94 NRGTCVCGECTCHDVDPTGDWGDIHGDTCECDERDCRAVYDRYSDDFCSGHGQCNCGRCD 250 260 270 280 290 300 310 320 330 340 350 360 pF1KB5 CKAGWYGKKCEHPQSCTLSAEESIRKCQGSSDLPCSGRGKCECGKCTCYPPGDRRVYGKT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS94 CKAGWYGKKCEHPQSCTLSAEESIRKCQGSSDLPCSGRGKCECGKCTCYPPGDRRVYGKT 310 320 330 340 350 360 370 380 390 400 410 420 pF1KB5 CECDDRRCEDLDGVVCGGHGTCSCGRCVCERGWFGKLCQHPRKCNMTEEQSKNLCESADG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS94 CECDDRRCEDLDGVVCGGHGTCSCGRCVCERGWFGKLCQHPRKCNMTEEQSKNLCESADG 370 380 390 400 410 420 430 440 450 460 470 480 pF1KB5 ILCSGKGSCHCGKCICSAEEWYISGEFCDCDDRDCDKHDGLICTGNGICSCGNCECWDGW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS94 ILCSGKGSCHCGKCICSAEEWYISGEFCDCDDRDCDKHDGLICTGNGICSCGNCECWDGW 430 440 450 460 470 480 490 pF1KB5 NGNACEIWLGSEYP :::::::::::::: CCDS94 NGNACEIWLGSEYP 490 >>CCDS61361.1 ITGBL1 gene_id:9358|Hs108|chr13 (401 aa) initn: 3174 init1: 3174 opt: 3178 Z-score: 2162.7 bits: 409.3 E(32554): 3.8e-114 Smith-Waterman score: 3178; 99.0% identity (99.2% similar) in 394 aa overlap (101-494:8-401) 80 90 100 110 120 130 pF1KB5 CGVCICHVTEPGMFFGPLCECHEWVCETYDGSTCAGHGKCDCGKCKCDQGWYGDACQYPT :. ::::::::::::::::::::::::: CCDS61 MNLVAVMGAFNKGHGKCDCGKCKCDQGWYGDACQYPT 10 20 30 140 150 160 170 180 190 pF1KB5 NCDLTKKKSNQMCKNSQDIICSNAGTCHCGRCKCDNSDGSGLVYGKFCECDDRECIDDET :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS61 NCDLTKKKSNQMCKNSQDIICSNAGTCHCGRCKCDNSDGSGLVYGKFCECDDRECIDDET 40 50 60 70 80 90 200 210 220 230 240 250 pF1KB5 EEICGGHGKCYCGNCYCKAGWHGDKCEFQCDITPWESKRRCTSPDGKICSNRGTCVCGEC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS61 EEICGGHGKCYCGNCYCKAGWHGDKCEFQCDITPWESKRRCTSPDGKICSNRGTCVCGEC 100 110 120 130 140 150 260 270 280 290 300 310 pF1KB5 TCHDVDPTGDWGDIHGDTCECDERDCRAVYDRYSDDFCSGHGQCNCGRCDCKAGWYGKKC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS61 TCHDVDPTGDWGDIHGDTCECDERDCRAVYDRYSDDFCSGHGQCNCGRCDCKAGWYGKKC 160 170 180 190 200 210 320 330 340 350 360 370 pF1KB5 EHPQSCTLSAEESIRKCQGSSDLPCSGRGKCECGKCTCYPPGDRRVYGKTCECDDRRCED :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS61 EHPQSCTLSAEESIRKCQGSSDLPCSGRGKCECGKCTCYPPGDRRVYGKTCECDDRRCED 220 230 240 250 260 270 380 390 400 410 420 430 pF1KB5 LDGVVCGGHGTCSCGRCVCERGWFGKLCQHPRKCNMTEEQSKNLCESADGILCSGKGSCH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS61 LDGVVCGGHGTCSCGRCVCERGWFGKLCQHPRKCNMTEEQSKNLCESADGILCSGKGSCH 280 290 300 310 320 330 440 450 460 470 480 490 pF1KB5 CGKCICSAEEWYISGEFCDCDDRDCDKHDGLICTGNGICSCGNCECWDGWNGNACEIWLG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS61 CGKCICSAEEWYISGEFCDCDDRDCDKHDGLICTGNGICSCGNCECWDGWNGNACEIWLG 340 350 360 370 380 390 pF1KB5 SEYP :::: CCDS61 SEYP 400 >>CCDS61362.1 ITGBL1 gene_id:9358|Hs108|chr13 (353 aa) initn: 2877 init1: 2877 opt: 2877 Z-score: 1960.5 bits: 371.7 E(32554): 7.1e-103 Smith-Waterman score: 2877; 100.0% identity (100.0% similar) in 353 aa overlap (142-494:1-353) 120 130 140 150 160 170 pF1KB5 CGKCKCDQGWYGDACQYPTNCDLTKKKSNQMCKNSQDIICSNAGTCHCGRCKCDNSDGSG :::::::::::::::::::::::::::::: CCDS61 MCKNSQDIICSNAGTCHCGRCKCDNSDGSG 10 20 30 180 190 200 210 220 230 pF1KB5 LVYGKFCECDDRECIDDETEEICGGHGKCYCGNCYCKAGWHGDKCEFQCDITPWESKRRC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS61 LVYGKFCECDDRECIDDETEEICGGHGKCYCGNCYCKAGWHGDKCEFQCDITPWESKRRC 40 50 60 70 80 90 240 250 260 270 280 290 pF1KB5 TSPDGKICSNRGTCVCGECTCHDVDPTGDWGDIHGDTCECDERDCRAVYDRYSDDFCSGH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS61 TSPDGKICSNRGTCVCGECTCHDVDPTGDWGDIHGDTCECDERDCRAVYDRYSDDFCSGH 100 110 120 130 140 150 300 310 320 330 340 350 pF1KB5 GQCNCGRCDCKAGWYGKKCEHPQSCTLSAEESIRKCQGSSDLPCSGRGKCECGKCTCYPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS61 GQCNCGRCDCKAGWYGKKCEHPQSCTLSAEESIRKCQGSSDLPCSGRGKCECGKCTCYPP 160 170 180 190 200 210 360 370 380 390 400 410 pF1KB5 GDRRVYGKTCECDDRRCEDLDGVVCGGHGTCSCGRCVCERGWFGKLCQHPRKCNMTEEQS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS61 GDRRVYGKTCECDDRRCEDLDGVVCGGHGTCSCGRCVCERGWFGKLCQHPRKCNMTEEQS 220 230 240 250 260 270 420 430 440 450 460 470 pF1KB5 KNLCESADGILCSGKGSCHCGKCICSAEEWYISGEFCDCDDRDCDKHDGLICTGNGICSC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS61 KNLCESADGILCSGKGSCHCGKCICSAEEWYISGEFCDCDDRDCDKHDGLICTGNGICSC 280 290 300 310 320 330 480 490 pF1KB5 GNCECWDGWNGNACEIWLGSEYP ::::::::::::::::::::::: CCDS61 GNCECWDGWNGNACEIWLGSEYP 340 350 >>CCDS73594.1 ITGBL1 gene_id:9358|Hs108|chr13 (445 aa) initn: 2789 init1: 2789 opt: 2854 Z-score: 1944.0 bits: 369.0 E(32554): 5.8e-102 Smith-Waterman score: 3470; 90.1% identity (90.1% similar) in 494 aa overlap (1-494:1-445) 10 20 30 40 50 60 pF1KB5 MRPPGFRNFLLLASSLLFAGLSAVPQSFSPSLRSWPGAACRLSRAESERRCRAPGQPPGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS73 MRPPGFRNFLLLASSLLFAGLSAVPQSFSPSLRSWPGAACRLSRAESERRCRAPGQPPGA 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB5 ALCHGRGRCDCGVCICHVTEPGMFFGPLCECHEWVCETYDGSTCAGHGKCDCGKCKCDQG :::::::::::::::::::::::::::::::::::::::::::::: CCDS73 ALCHGRGRCDCGVCICHVTEPGMFFGPLCECHEWVCETYDGSTCAG-------------- 70 80 90 100 130 140 150 160 170 180 pF1KB5 WYGDACQYPTNCDLTKKKSNQMCKNSQDIICSNAGTCHCGRCKCDNSDGSGLVYGKFCEC ::::::::::::::::::::::::: CCDS73 -----------------------------------TCHCGRCKCDNSDGSGLVYGKFCEC 110 120 130 190 200 210 220 230 240 pF1KB5 DDRECIDDETEEICGGHGKCYCGNCYCKAGWHGDKCEFQCDITPWESKRRCTSPDGKICS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS73 DDRECIDDETEEICGGHGKCYCGNCYCKAGWHGDKCEFQCDITPWESKRRCTSPDGKICS 140 150 160 170 180 190 250 260 270 280 290 300 pF1KB5 NRGTCVCGECTCHDVDPTGDWGDIHGDTCECDERDCRAVYDRYSDDFCSGHGQCNCGRCD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS73 NRGTCVCGECTCHDVDPTGDWGDIHGDTCECDERDCRAVYDRYSDDFCSGHGQCNCGRCD 200 210 220 230 240 250 310 320 330 340 350 360 pF1KB5 CKAGWYGKKCEHPQSCTLSAEESIRKCQGSSDLPCSGRGKCECGKCTCYPPGDRRVYGKT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS73 CKAGWYGKKCEHPQSCTLSAEESIRKCQGSSDLPCSGRGKCECGKCTCYPPGDRRVYGKT 260 270 280 290 300 310 370 380 390 400 410 420 pF1KB5 CECDDRRCEDLDGVVCGGHGTCSCGRCVCERGWFGKLCQHPRKCNMTEEQSKNLCESADG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS73 CECDDRRCEDLDGVVCGGHGTCSCGRCVCERGWFGKLCQHPRKCNMTEEQSKNLCESADG 320 330 340 350 360 370 430 440 450 460 470 480 pF1KB5 ILCSGKGSCHCGKCICSAEEWYISGEFCDCDDRDCDKHDGLICTGNGICSCGNCECWDGW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS73 ILCSGKGSCHCGKCICSAEEWYISGEFCDCDDRDCDKHDGLICTGNGICSCGNCECWDGW 380 390 400 410 420 430 490 pF1KB5 NGNACEIWLGSEYP :::::::::::::: CCDS73 NGNACEIWLGSEYP 440 >>CCDS13716.1 ITGB2 gene_id:3689|Hs108|chr21 (769 aa) initn: 218 init1: 218 opt: 499 Z-score: 355.3 bits: 75.9 E(32554): 1.8e-13 Smith-Waterman score: 501; 34.0% identity (56.6% similar) in 235 aa overlap (87-310:443-643) 60 70 80 90 100 110 pF1KB5 PPGAALCHGRGRCDCGVCICHVTEPGMFFGPLCECHEWVC--ETYDGSTCAGHGKCDCGK : :::. : .. : : : :.: .:: CCDS13 VKVTATECIQEQSFVIRALGFTDIVTVQVLPQCECR---CRDQSRDRSLCHGKGFLECGI 420 430 440 450 460 120 130 140 150 160 170 pF1KB5 CKCDQGWYGDACQYPTNCDLTKKKSNQM---C-KNSQDIICSNAGTCHCGRCKCDNSDGS :.:: :. : :. :. ..:... : :....::::. : : ::.: : .:: CCDS13 CRCDTGYIGKNCE----CQTQGRSSQELEGSCRKDNNSIICSGLGDCVCGQCLCHTSDVP 470 480 490 500 510 520 180 190 200 210 220 pF1KB5 G-LVYGKFCECDDRECIDDETEEICGGHGK--CYCGNCYCKAGWHGDKCEFQCDITPWES : :.::..:::: .: . . ..::: :. :.::.: :. :..:. : ::. .. CCDS13 GKLIYGQYCECDTINC-ERYNGQVCGGPGRGLCFCGKCRCHPGFEGSAC--QCE----RT 530 540 550 560 570 230 240 250 260 270 280 pF1KB5 KRRCTSPDGKICSNRGTCVCGECTCHDVDPTGDWGDIHGDTC-ECDERDCRAVYDRYSDD . : .: ::.:: : :. : :: .: . : :: : . .: CCDS13 TEGCLNPRRVECSGRGRCRCNVCECH----SG----YQLPLCQECP--GCPSPCGKY--- 580 590 600 610 620 290 300 310 320 330 340 pF1KB5 FCSGHGQCNCGRC-DCKAGWYGKKCEHPQSCTLSAEESIRKCQGSSDLPCSGRGKCECGK .:..: . : .::.: CCDS13 -------ISCAECLKFEKGPFGKNCSAACPGLQLSNNPVKGRTCKERDSEGCWVAYTLEQ 630 640 650 660 670 >>CCDS58599.1 ITGB4 gene_id:3691|Hs108|chr17 (1752 aa) initn: 212 init1: 212 opt: 492 Z-score: 347.2 bits: 75.5 E(32554): 5.1e-13 Smith-Waterman score: 534; 34.4% identity (58.5% similar) in 224 aa overlap (267-486:453-649) 240 250 260 270 280 290 pF1KB5 KICSNRGTCVCGECTCHDVDPTGDWGDIHGDTCECD-ERDCRAVYDRYSDDFCSGHGQCN :.: :. ... :.. :: .:. CCDS58 VCQLPEDQKGNIHLKPSFSDGLKMDAGIICDVCTCELQKEVRSAR-------CSFNGDFV 430 440 450 460 470 300 310 320 330 340 350 pF1KB5 CGRCDCKAGWYGKKCEHPQSCTLSAEESIRKC-QGSSDLPCSGRGKCECGKCTCYPPGDR ::.: :. :: :. : .:. .. .:. : . . : ::::::.:.::.:.:: :. CCDS58 CGQCVCSEGWSGQTC----NCSTGSLSDIQPCLREGEDKPCSGRGECQCGHCVCY--GEG 480 490 500 510 520 360 370 380 390 400 410 pF1KB5 RVYGKTCECDDRRCEDLDGVVCGGHGTCSCGRCVCERGWFGKLCQHPRKCNMTEEQSKNL : :. :: :. .: .: .:. .: :: :.:::: :: : :. : :. CCDS58 RYEGQFCEYDNFQCPRTSGFLCNDRGRCSMGQCVCEPGWTGPSCDCP--------LSNAT 530 540 550 560 570 580 420 430 440 450 460 470 pF1KB5 CESADGILCSGKGSCHCGKCICSAEEWYISGEFCDCDDRDCDKHDGLICTGNGICSCGNC : ...: .:.:.: :.::.: : . : . .:. . : :: : . . :: .: CCDS58 CIDSNGGICNGRGHCECGRCHCHQQSLY-TDTICEINYSAI--HPGL-C--EDLRSCVQC 590 600 610 620 630 480 490 pF1KB5 ECWDGWN--GNACEIWLGSEYP . : . : .:: CCDS58 QAWGTGEKKGRTCEECNFKVKMVDELKRAEEVVVRCSFRDEDDDCTYSYTMEGDGAPGPN 640 650 660 670 680 690 >>CCDS32736.1 ITGB4 gene_id:3691|Hs108|chr17 (1805 aa) initn: 212 init1: 212 opt: 492 Z-score: 347.1 bits: 75.6 E(32554): 5.2e-13 Smith-Waterman score: 534; 34.4% identity (58.5% similar) in 224 aa overlap (267-486:453-649) 240 250 260 270 280 290 pF1KB5 KICSNRGTCVCGECTCHDVDPTGDWGDIHGDTCECD-ERDCRAVYDRYSDDFCSGHGQCN :.: :. ... :.. :: .:. CCDS32 VCQLPEDQKGNIHLKPSFSDGLKMDAGIICDVCTCELQKEVRSAR-------CSFNGDFV 430 440 450 460 470 300 310 320 330 340 350 pF1KB5 CGRCDCKAGWYGKKCEHPQSCTLSAEESIRKC-QGSSDLPCSGRGKCECGKCTCYPPGDR ::.: :. :: :. : .:. .. .:. : . . : ::::::.:.::.:.:: :. CCDS32 CGQCVCSEGWSGQTC----NCSTGSLSDIQPCLREGEDKPCSGRGECQCGHCVCY--GEG 480 490 500 510 520 360 370 380 390 400 410 pF1KB5 RVYGKTCECDDRRCEDLDGVVCGGHGTCSCGRCVCERGWFGKLCQHPRKCNMTEEQSKNL : :. :: :. .: .: .:. .: :: :.:::: :: : :. : :. CCDS32 RYEGQFCEYDNFQCPRTSGFLCNDRGRCSMGQCVCEPGWTGPSCDCP--------LSNAT 530 540 550 560 570 580 420 430 440 450 460 470 pF1KB5 CESADGILCSGKGSCHCGKCICSAEEWYISGEFCDCDDRDCDKHDGLICTGNGICSCGNC : ...: .:.:.: :.::.: : . : . .:. . : :: : . . :: .: CCDS32 CIDSNGGICNGRGHCECGRCHCHQQSLY-TDTICEINYSAI--HPGL-C--EDLRSCVQC 590 600 610 620 630 480 490 pF1KB5 ECWDGWN--GNACEIWLGSEYP . : . : .:: CCDS32 QAWGTGEKKGRTCEECNFKVKMVDELKRAEEVVVRCSFRDEDDDCTYSYTMEGDGAPGPN 640 650 660 670 680 690 >>CCDS11727.1 ITGB4 gene_id:3691|Hs108|chr17 (1822 aa) initn: 212 init1: 212 opt: 492 Z-score: 347.0 bits: 75.6 E(32554): 5.2e-13 Smith-Waterman score: 534; 34.4% identity (58.5% similar) in 224 aa overlap (267-486:453-649) 240 250 260 270 280 290 pF1KB5 KICSNRGTCVCGECTCHDVDPTGDWGDIHGDTCECD-ERDCRAVYDRYSDDFCSGHGQCN :.: :. ... :.. :: .:. CCDS11 VCQLPEDQKGNIHLKPSFSDGLKMDAGIICDVCTCELQKEVRSAR-------CSFNGDFV 430 440 450 460 470 300 310 320 330 340 350 pF1KB5 CGRCDCKAGWYGKKCEHPQSCTLSAEESIRKC-QGSSDLPCSGRGKCECGKCTCYPPGDR ::.: :. :: :. : .:. .. .:. : . . : ::::::.:.::.:.:: :. CCDS11 CGQCVCSEGWSGQTC----NCSTGSLSDIQPCLREGEDKPCSGRGECQCGHCVCY--GEG 480 490 500 510 520 360 370 380 390 400 410 pF1KB5 RVYGKTCECDDRRCEDLDGVVCGGHGTCSCGRCVCERGWFGKLCQHPRKCNMTEEQSKNL : :. :: :. .: .: .:. .: :: :.:::: :: : :. : :. CCDS11 RYEGQFCEYDNFQCPRTSGFLCNDRGRCSMGQCVCEPGWTGPSCDCP--------LSNAT 530 540 550 560 570 580 420 430 440 450 460 470 pF1KB5 CESADGILCSGKGSCHCGKCICSAEEWYISGEFCDCDDRDCDKHDGLICTGNGICSCGNC : ...: .:.:.: :.::.: : . : . .:. . : :: : . . :: .: CCDS11 CIDSNGGICNGRGHCECGRCHCHQQSLY-TDTICEINYSAI--HPGL-C--EDLRSCVQC 590 600 610 620 630 480 490 pF1KB5 ECWDGWN--GNACEIWLGSEYP . : . : .:: CCDS11 QAWGTGEKKGRTCEECNFKVKMVDELKRAEEVVVRCSFRDEDDDCTYSYTMEGDGAPGPN 640 650 660 670 680 690 >>CCDS41237.1 MEGF6 gene_id:1953|Hs108|chr1 (1541 aa) initn: 306 init1: 120 opt: 489 Z-score: 345.7 bits: 75.1 E(32554): 6.2e-13 Smith-Waterman score: 567; 28.7% identity (44.4% similar) in 464 aa overlap (63-486:789-1203) 40 50 60 70 80 90 pF1KB5 RSWPGAACRLSRAESERRCRAPGQPPGAALCHGRGRCD--CGVCICHVTEPGMFFGPLCE :. .::: :.:.: :: : : :. CCDS41 RCPPGRTGEDCEADCPEGRWGLGCQEICPACQHAARCDPETGACLCL---PG-FVGSRCQ 760 770 780 790 800 810 100 110 120 130 140 pF1KB5 --CHE-WV---CETYDGSTCAGHGKCD--CGKCKCDQGWYGDACQYPTNCDLTKKKSNQM : : :.: .::. :.: :.:.: :: : .:: :: . . CCDS41 DVCPAGWYGPSCQTR--CSCANDGHCHPATGHCSCAPGWTGFSCQR--ACDTGHWGPD-- 820 830 840 850 860 150 160 170 180 190 pF1KB5 CKNSQDIICSNA-GTCHC--GRCKCDNSDGSGLVYGKFCECDDRECIDDETEEICGGHGK : :. :: . :.: : : :. .: : : :: ..: . . : . . CCDS41 C--SHPCNCSAGHGSCDAISGLCLCE----AGYV-GPRCE---QQCPQGHFGPGCEQRCQ 870 880 890 900 910 200 210 220 230 240 pF1KB5 CY----C----GNCYCKAGWHGDKCEFQCDITPW--ESKRRCTSPDGKICSNRGTCVCGE : : : : : :::.: :: : . . . :. : :. : : CCDS41 CQHGAACDHVSGACTCPAGWRGTFCEHACPAGFFGLDCRSACNCTAGAACDA----VNGS 920 930 940 950 960 970 250 260 270 280 290 300 pF1KB5 CTCHDVDPTGDWGDIHGDTCECDE--RDCRAVYDRYSDDFCSG-HGQCNCGRCDCKAGWY : : :.: : ..:: ..: . .. :. ::::.:. ::. CCDS41 CLC----PAGRRGPRCAETCPAHTYGHNCSQACACFNGASCDPVHGQCHCA-----PGWM 980 990 1000 1010 1020 310 320 330 340 350 360 pF1KB5 GKKCEHPQSCTLSAEESIRKCQGSSDLPCSGRGKCE--CGKCTCYPPGDRRVYGKTCE-- : .: . : ... ..: :.. : :. :.:.: : : : .:: CCDS41 GPSCLQACPAGLYGDNCRHSCL------CQNGGTCDPVSGHCAC-PEG---WAGLACEKE 1030 1040 1050 1060 1070 370 380 390 400 410 pF1KB5 CDDRR----CEDLDGVVCGGHGTCSCGRCVCERGWFGKLCQHPRKCNMTEEQSKNLCESA : : :. : . :: :::.: :: : :: : . : . : CCDS41 CLPRDVRAGCRHSGGCLNGGLCDPHTGRCLCPAGWTGDKCQSPCLRGWFGEACAQRCSCP 1080 1090 1100 1110 1120 1130 420 430 440 450 460 470 pF1KB5 DGILCSG-KGSCHC--GKCICSAEEWYISGEFCDCDDRDCDKHDGLICTG-NGIC--SCG : : :.:.: : . :. : : .:: . : : : : . : CCDS41 PGAACHHVTGACRCPPGFTGSGCEQACPPGSF----GEDCAQM--CQCPGENPACHPATG 1140 1150 1160 1170 1180 480 490 pF1KB5 NCECWDGWNGNACEIWLGSEYP .: : :..: .:. CCDS41 TCSCAAGYHGPSCQQRCPPGRYGPGCEQLCGCLNGGSCDAATGACRCPTGFLGTDCNLTC 1190 1200 1210 1220 1230 1240 >>CCDS7174.1 ITGB1 gene_id:3688|Hs108|chr10 (798 aa) initn: 545 init1: 276 opt: 481 Z-score: 343.1 bits: 73.6 E(32554): 8.7e-13 Smith-Waterman score: 500; 32.8% identity (56.5% similar) in 253 aa overlap (88-334:461-680) 60 70 80 90 100 110 pF1KB5 PGAALCHGRGRCDCGVCICHVTEPGMFFGPLCECHEWVCETYDGSTC-AGHGKCDCGKCK .:::. .. : :.: .:: :. CCDS71 TSNKCPKKDSDSFKIRPLGFTEEVEVILQYICECECQSEGIPESPKCHEGNGTFECGACR 440 450 460 470 480 490 120 130 140 150 160 170 pF1KB5 CDQGWYGDACQYPTNCDLTKKKSNQMCK--NSQDIICSNAGTCHCGRCKCDNSDGSGLVY :..: : :. :. ..... . .:. ::..: ::: : : ::.: : . :... .: CCDS71 CNEGRVGRHCECSTD-EVNSEDMDAYCRKENSSEI-CSNNGECVCGQCVCRKRDNTNEIY 500 510 520 530 540 180 190 200 210 220 230 pF1KB5 -GKFCECDDRECIDDETEEICGGHGKCYCGNCYCKAGWHGDKCEFQCDITPWESKRRCTS :::::::. .: : . ::::.: : : : :. .. :. :. . : . : . CCDS71 SGKFCECDNFNC-DRSNGLICGGNGVCKCRVCECNPNYTGSACDCSLDTST------CEA 550 560 570 580 590 600 240 250 260 270 280 290 pF1KB5 PDGKICSNRGTCVCGECTCHDVDPTGDWGDIHGDTCE-CDERDCRAVYDRYSDDFCSGHG .:.::..:: : :: : : .:: ..:.::: : . : .: :. : CCDS71 SNGQICNGRGICECGVCKC--TDPK-----FQGQTCEMC--QTCLGV--------CAEHK 610 620 630 640 300 310 320 330 340 350 pF1KB5 QCNCGRCDCKAGWYGKKCEH-PQSCTLSAEESIRKCQGSSDLPCSGRGKCECGKCTCYPP .: .:.: :.: . : :. .: : .. . :: CCDS71 EC----VQCRAFNKGEKKDTCTQECSYF---NITKVESRDKLPQPVQPDPVSHCKEKDVD 650 660 670 680 690 360 370 380 390 400 410 pF1KB5 GDRRVYGKTCECDDRRCEDLDGVVCGGHGTCSCGRCVCERGWFGKLCQHPRKCNMTEEQS CCDS71 DCWFYFTYSVNGNNEVMVHVVENPECPTGPDIIPIVAGVVAGIVLIGLALLLIWKLLMII 700 710 720 730 740 750 494 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 20:36:21 2016 done: Mon Nov 7 20:36:21 2016 Total Scan time: 3.190 Total Display time: 0.080 Function used was FASTA [36.3.4 Apr, 2011]