FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1144, 428 aa 1>>>pF1KE1144 428 - 428 aa - 428 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.7646+/-0.000991; mu= 14.5809+/- 0.060 mean_var=69.2335+/-13.937, 0's: 0 Z-trim(104.6): 32 B-trim: 10 in 1/49 Lambda= 0.154140 statistics sampled from 7970 (7993) to 7970 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.622), E-opt: 0.2 (0.246), width: 16 Scan time: 2.980 The best scores are: opt bits E(32554) CCDS9457.1 FBXL3 gene_id:26224|Hs108|chr13 ( 428) 2891 652.2 2.7e-187 >>CCDS9457.1 FBXL3 gene_id:26224|Hs108|chr13 (428 aa) initn: 2891 init1: 2891 opt: 2891 Z-score: 3475.9 bits: 652.2 E(32554): 2.7e-187 Smith-Waterman score: 2891; 100.0% identity (100.0% similar) in 428 aa overlap (1-428:1-428) 10 20 30 40 50 60 pF1KE1 MKRGGRDSDRNSSEEGTAEKSKKLRTTNEHSQTCDWGNLLQDIILQVFKYLPLLDRAHAS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS94 MKRGGRDSDRNSSEEGTAEKSKKLRTTNEHSQTCDWGNLLQDIILQVFKYLPLLDRAHAS 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 QVCRNWNQVFHMPDLWRCFEFELNQPATSYLKATHPELIKQIIKRHSNHLQYVSFKVDSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS94 QVCRNWNQVFHMPDLWRCFEFELNQPATSYLKATHPELIKQIIKRHSNHLQYVSFKVDSS 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 KESAEAACDILSQLVNCSLKTLGLISTARPSFMDLPKSHFISALTVVFVNSKSLSSLKID :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS94 KESAEAACDILSQLVNCSLKTLGLISTARPSFMDLPKSHFISALTVVFVNSKSLSSLKID 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 DTPVDDPSLKVLVANNSDTLKLLKMSSCPHVSPAGILCVADQCHGLRELALNYHLLSDEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS94 DTPVDDPSLKVLVANNSDTLKLLKMSSCPHVSPAGILCVADQCHGLRELALNYHLLSDEL 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE1 LLALSSEKHVRLEHLRIDVVSENPGQTHFHTIQKSSWDAFIRHSPKVNLVMYFFLYEEEF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS94 LLALSSEKHVRLEHLRIDVVSENPGQTHFHTIQKSSWDAFIRHSPKVNLVMYFFLYEEEF 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE1 DPFFRYEIPATHLYFGRSVSKDVLGRVGMTCPRLVELVVCANGLRPLDEELIRIAERCKN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS94 DPFFRYEIPATHLYFGRSVSKDVLGRVGMTCPRLVELVVCANGLRPLDEELIRIAERCKN 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE1 LSAIGLGECEVSCSAFVEFVKMCGGRLSQLSIMEEVLIPDQKYSLEQIHWEVSKHLGRVW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS94 LSAIGLGECEVSCSAFVEFVKMCGGRLSQLSIMEEVLIPDQKYSLEQIHWEVSKHLGRVW 370 380 390 400 410 420 pF1KE1 FPDMMPTW :::::::: CCDS94 FPDMMPTW 428 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 14:34:23 2016 done: Sun Nov 6 14:34:24 2016 Total Scan time: 2.980 Total Display time: -0.040 Function used was FASTA [36.3.4 Apr, 2011]