FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1984, 559 aa 1>>>pF1KE1984 559 - 559 aa - 559 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 9.1518+/-0.000404; mu= -0.4636+/- 0.025 mean_var=158.1227+/-33.896, 0's: 0 Z-trim(116.2): 5 B-trim: 931 in 1/56 Lambda= 0.101995 statistics sampled from 27172 (27177) to 27172 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.683), E-opt: 0.2 (0.319), width: 16 Scan time: 10.800 The best scores are: opt bits E(85289) NP_079084 (OMIM: 610510) protein aurora borealis i ( 619) 3740 562.6 1.3e-159 NP_001273675 (OMIM: 610510) protein aurora boreali ( 634) 3740 562.6 1.3e-159 NP_001273676 (OMIM: 610510) protein aurora boreali ( 489) 3157 476.8 6.8e-134 XP_006719931 (OMIM: 610510) PREDICTED: protein aur ( 568) 3060 462.6 1.5e-129 >>NP_079084 (OMIM: 610510) protein aurora borealis isofo (619 aa) initn: 3740 init1: 3740 opt: 3740 Z-score: 2986.7 bits: 562.6 E(85289): 1.3e-159 Smith-Waterman score: 3740; 100.0% identity (100.0% similar) in 559 aa overlap (1-559:61-619) 10 20 30 pF1KE1 MGDVKESKMQITPETPGRIPVLNPFESPSD :::::::::::::::::::::::::::::: NP_079 CLSWKLAWPPELPGVGTGGFVLYAPFSLCAMGDVKESKMQITPETPGRIPVLNPFESPSD 40 50 60 70 80 90 40 50 60 70 80 90 pF1KE1 YSNLHEQTLASPSVFKSTKLPTPGKFRWSIDQLAVINPVEIDPEDIHRQALYLSHSRIDK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_079 YSNLHEQTLASPSVFKSTKLPTPGKFRWSIDQLAVINPVEIDPEDIHRQALYLSHSRIDK 100 110 120 130 140 150 100 110 120 130 140 150 pF1KE1 DVEDKRQKAIEEFFTKDVIVPSPWTDHEGKQLSQCHSSKCTNINSDSPVGKKLTIHSEKS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_079 DVEDKRQKAIEEFFTKDVIVPSPWTDHEGKQLSQCHSSKCTNINSDSPVGKKLTIHSEKS 160 170 180 190 200 210 160 170 180 190 200 210 pF1KE1 DAACQTLLSLPVDFNLENILGDYFRADEFADQSPGNLSSSSLRRKLFLDGNGSISDSLPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_079 DAACQTLLSLPVDFNLENILGDYFRADEFADQSPGNLSSSSLRRKLFLDGNGSISDSLPS 220 230 240 250 260 270 220 230 240 250 260 270 pF1KE1 ASPGSPHSGVQTSLEMFYSIDLSPVKCRSPLQTPSSGQFSSSPIQASAKKYSLGSITSPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_079 ASPGSPHSGVQTSLEMFYSIDLSPVKCRSPLQTPSSGQFSSSPIQASAKKYSLGSITSPS 280 290 300 310 320 330 280 290 300 310 320 330 pF1KE1 PISSPTFSPIEFQIGETPLSEQRKFTVHSPDASSGTNSNGITNPCIRSPYIDGCSPIKNW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_079 PISSPTFSPIEFQIGETPLSEQRKFTVHSPDASSGTNSNGITNPCIRSPYIDGCSPIKNW 340 350 360 370 380 390 340 350 360 370 380 390 pF1KE1 SPMRLQMYSGGTQYRTSVIQIPFTLETQGEDEEDKENIPSTDVSSPAMDAAGIHLRQFSN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_079 SPMRLQMYSGGTQYRTSVIQIPFTLETQGEDEEDKENIPSTDVSSPAMDAAGIHLRQFSN 400 410 420 430 440 450 400 410 420 430 440 450 pF1KE1 EASTHGTHLVVTAMSVTQNQSSASEKELALLQDVEREKDNNTVDMVDPIEIADETTWIKE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_079 EASTHGTHLVVTAMSVTQNQSSASEKELALLQDVEREKDNNTVDMVDPIEIADETTWIKE 460 470 480 490 500 510 460 470 480 490 500 510 pF1KE1 PVDNGSLPMTDFVSGIAFSIENSHMCMSPLAESSVIPCESSNIQMDSGYNTQNCGSNIMD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_079 PVDNGSLPMTDFVSGIAFSIENSHMCMSPLAESSVIPCESSNIQMDSGYNTQNCGSNIMD 520 530 540 550 560 570 520 530 540 550 pF1KE1 TVGAESYCKESDAQTCEVESKSQAFNMKQDHTTQRCWMKTASPFQCSSP ::::::::::::::::::::::::::::::::::::::::::::::::: NP_079 TVGAESYCKESDAQTCEVESKSQAFNMKQDHTTQRCWMKTASPFQCSSP 580 590 600 610 >>NP_001273675 (OMIM: 610510) protein aurora borealis is (634 aa) initn: 3740 init1: 3740 opt: 3740 Z-score: 2986.6 bits: 562.6 E(85289): 1.3e-159 Smith-Waterman score: 3740; 100.0% identity (100.0% similar) in 559 aa overlap (1-559:76-634) 10 20 30 pF1KE1 MGDVKESKMQITPETPGRIPVLNPFESPSD :::::::::::::::::::::::::::::: NP_001 SHSIQGSRLHLNLPEVDSFPPHPAKFSLCAMGDVKESKMQITPETPGRIPVLNPFESPSD 50 60 70 80 90 100 40 50 60 70 80 90 pF1KE1 YSNLHEQTLASPSVFKSTKLPTPGKFRWSIDQLAVINPVEIDPEDIHRQALYLSHSRIDK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 YSNLHEQTLASPSVFKSTKLPTPGKFRWSIDQLAVINPVEIDPEDIHRQALYLSHSRIDK 110 120 130 140 150 160 100 110 120 130 140 150 pF1KE1 DVEDKRQKAIEEFFTKDVIVPSPWTDHEGKQLSQCHSSKCTNINSDSPVGKKLTIHSEKS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 DVEDKRQKAIEEFFTKDVIVPSPWTDHEGKQLSQCHSSKCTNINSDSPVGKKLTIHSEKS 170 180 190 200 210 220 160 170 180 190 200 210 pF1KE1 DAACQTLLSLPVDFNLENILGDYFRADEFADQSPGNLSSSSLRRKLFLDGNGSISDSLPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 DAACQTLLSLPVDFNLENILGDYFRADEFADQSPGNLSSSSLRRKLFLDGNGSISDSLPS 230 240 250 260 270 280 220 230 240 250 260 270 pF1KE1 ASPGSPHSGVQTSLEMFYSIDLSPVKCRSPLQTPSSGQFSSSPIQASAKKYSLGSITSPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 ASPGSPHSGVQTSLEMFYSIDLSPVKCRSPLQTPSSGQFSSSPIQASAKKYSLGSITSPS 290 300 310 320 330 340 280 290 300 310 320 330 pF1KE1 PISSPTFSPIEFQIGETPLSEQRKFTVHSPDASSGTNSNGITNPCIRSPYIDGCSPIKNW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 PISSPTFSPIEFQIGETPLSEQRKFTVHSPDASSGTNSNGITNPCIRSPYIDGCSPIKNW 350 360 370 380 390 400 340 350 360 370 380 390 pF1KE1 SPMRLQMYSGGTQYRTSVIQIPFTLETQGEDEEDKENIPSTDVSSPAMDAAGIHLRQFSN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 SPMRLQMYSGGTQYRTSVIQIPFTLETQGEDEEDKENIPSTDVSSPAMDAAGIHLRQFSN 410 420 430 440 450 460 400 410 420 430 440 450 pF1KE1 EASTHGTHLVVTAMSVTQNQSSASEKELALLQDVEREKDNNTVDMVDPIEIADETTWIKE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 EASTHGTHLVVTAMSVTQNQSSASEKELALLQDVEREKDNNTVDMVDPIEIADETTWIKE 470 480 490 500 510 520 460 470 480 490 500 510 pF1KE1 PVDNGSLPMTDFVSGIAFSIENSHMCMSPLAESSVIPCESSNIQMDSGYNTQNCGSNIMD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 PVDNGSLPMTDFVSGIAFSIENSHMCMSPLAESSVIPCESSNIQMDSGYNTQNCGSNIMD 530 540 550 560 570 580 520 530 540 550 pF1KE1 TVGAESYCKESDAQTCEVESKSQAFNMKQDHTTQRCWMKTASPFQCSSP ::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 TVGAESYCKESDAQTCEVESKSQAFNMKQDHTTQRCWMKTASPFQCSSP 590 600 610 620 630 >>NP_001273676 (OMIM: 610510) protein aurora borealis is (489 aa) initn: 3155 init1: 3155 opt: 3157 Z-score: 2524.8 bits: 476.8 E(85289): 6.8e-134 Smith-Waterman score: 3157; 98.5% identity (99.6% similar) in 481 aa overlap (81-559:9-489) 60 70 80 90 100 pF1KE1 PTPGKFRWSIDQLAVINPVEIDPEDIHRQALYLSHS--RIDKDVEDKRQKAIEEFFTKDV :.:... .::::::::::::::::::::: NP_001 MNKLSPVLLFLNQQNYQIDKDVEDKRQKAIEEFFTKDV 10 20 30 110 120 130 140 150 160 pF1KE1 IVPSPWTDHEGKQLSQCHSSKCTNINSDSPVGKKLTIHSEKSDAACQTLLSLPVDFNLEN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 IVPSPWTDHEGKQLSQCHSSKCTNINSDSPVGKKLTIHSEKSDAACQTLLSLPVDFNLEN 40 50 60 70 80 90 170 180 190 200 210 220 pF1KE1 ILGDYFRADEFADQSPGNLSSSSLRRKLFLDGNGSISDSLPSASPGSPHSGVQTSLEMFY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 ILGDYFRADEFADQSPGNLSSSSLRRKLFLDGNGSISDSLPSASPGSPHSGVQTSLEMFY 100 110 120 130 140 150 230 240 250 260 270 280 pF1KE1 SIDLSPVKCRSPLQTPSSGQFSSSPIQASAKKYSLGSITSPSPISSPTFSPIEFQIGETP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 SIDLSPVKCRSPLQTPSSGQFSSSPIQASAKKYSLGSITSPSPISSPTFSPIEFQIGETP 160 170 180 190 200 210 290 300 310 320 330 340 pF1KE1 LSEQRKFTVHSPDASSGTNSNGITNPCIRSPYIDGCSPIKNWSPMRLQMYSGGTQYRTSV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 LSEQRKFTVHSPDASSGTNSNGITNPCIRSPYIDGCSPIKNWSPMRLQMYSGGTQYRTSV 220 230 240 250 260 270 350 360 370 380 390 400 pF1KE1 IQIPFTLETQGEDEEDKENIPSTDVSSPAMDAAGIHLRQFSNEASTHGTHLVVTAMSVTQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 IQIPFTLETQGEDEEDKENIPSTDVSSPAMDAAGIHLRQFSNEASTHGTHLVVTAMSVTQ 280 290 300 310 320 330 410 420 430 440 450 460 pF1KE1 NQSSASEKELALLQDVEREKDNNTVDMVDPIEIADETTWIKEPVDNGSLPMTDFVSGIAF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 NQSSASEKELALLQDVEREKDNNTVDMVDPIEIADETTWIKEPVDNGSLPMTDFVSGIAF 340 350 360 370 380 390 470 480 490 500 510 520 pF1KE1 SIENSHMCMSPLAESSVIPCESSNIQMDSGYNTQNCGSNIMDTVGAESYCKESDAQTCEV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 SIENSHMCMSPLAESSVIPCESSNIQMDSGYNTQNCGSNIMDTVGAESYCKESDAQTCEV 400 410 420 430 440 450 530 540 550 pF1KE1 ESKSQAFNMKQDHTTQRCWMKTASPFQCSSP ::::::::::::::::::::::::::::::: NP_001 ESKSQAFNMKQDHTTQRCWMKTASPFQCSSP 460 470 480 >>XP_006719931 (OMIM: 610510) PREDICTED: protein aurora (568 aa) initn: 3384 init1: 3060 opt: 3060 Z-score: 2446.6 bits: 462.6 E(85289): 1.5e-129 Smith-Waterman score: 3286; 90.9% identity (90.9% similar) in 559 aa overlap (1-559:61-568) 10 20 30 pF1KE1 MGDVKESKMQITPETPGRIPVLNPFESPSD :::::::::::::::::::::::::::::: XP_006 CLSWKLAWPPELPGVGTGGFVLYAPFSLCAMGDVKESKMQITPETPGRIPVLNPFESPSD 40 50 60 70 80 90 40 50 60 70 80 90 pF1KE1 YSNLHEQTLASPSVFKSTKLPTPGKFRWSIDQLAVINPVEIDPEDIHRQALYLSHSRIDK ::::::::::::::::::::: XP_006 YSNLHEQTLASPSVFKSTKLP--------------------------------------- 100 110 100 110 120 130 140 150 pF1KE1 DVEDKRQKAIEEFFTKDVIVPSPWTDHEGKQLSQCHSSKCTNINSDSPVGKKLTIHSEKS :::::::::::::::::::::::::::::::::::::::::::::::: XP_006 ------------FFTKDVIVPSPWTDHEGKQLSQCHSSKCTNINSDSPVGKKLTIHSEKS 120 130 140 150 160 170 180 190 200 210 pF1KE1 DAACQTLLSLPVDFNLENILGDYFRADEFADQSPGNLSSSSLRRKLFLDGNGSISDSLPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 DAACQTLLSLPVDFNLENILGDYFRADEFADQSPGNLSSSSLRRKLFLDGNGSISDSLPS 160 170 180 190 200 210 220 230 240 250 260 270 pF1KE1 ASPGSPHSGVQTSLEMFYSIDLSPVKCRSPLQTPSSGQFSSSPIQASAKKYSLGSITSPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 ASPGSPHSGVQTSLEMFYSIDLSPVKCRSPLQTPSSGQFSSSPIQASAKKYSLGSITSPS 220 230 240 250 260 270 280 290 300 310 320 330 pF1KE1 PISSPTFSPIEFQIGETPLSEQRKFTVHSPDASSGTNSNGITNPCIRSPYIDGCSPIKNW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 PISSPTFSPIEFQIGETPLSEQRKFTVHSPDASSGTNSNGITNPCIRSPYIDGCSPIKNW 280 290 300 310 320 330 340 350 360 370 380 390 pF1KE1 SPMRLQMYSGGTQYRTSVIQIPFTLETQGEDEEDKENIPSTDVSSPAMDAAGIHLRQFSN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 SPMRLQMYSGGTQYRTSVIQIPFTLETQGEDEEDKENIPSTDVSSPAMDAAGIHLRQFSN 340 350 360 370 380 390 400 410 420 430 440 450 pF1KE1 EASTHGTHLVVTAMSVTQNQSSASEKELALLQDVEREKDNNTVDMVDPIEIADETTWIKE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 EASTHGTHLVVTAMSVTQNQSSASEKELALLQDVEREKDNNTVDMVDPIEIADETTWIKE 400 410 420 430 440 450 460 470 480 490 500 510 pF1KE1 PVDNGSLPMTDFVSGIAFSIENSHMCMSPLAESSVIPCESSNIQMDSGYNTQNCGSNIMD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 PVDNGSLPMTDFVSGIAFSIENSHMCMSPLAESSVIPCESSNIQMDSGYNTQNCGSNIMD 460 470 480 490 500 510 520 530 540 550 pF1KE1 TVGAESYCKESDAQTCEVESKSQAFNMKQDHTTQRCWMKTASPFQCSSP ::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 TVGAESYCKESDAQTCEVESKSQAFNMKQDHTTQRCWMKTASPFQCSSP 520 530 540 550 560 559 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 14:35:03 2016 done: Sun Nov 6 14:35:05 2016 Total Scan time: 10.800 Total Display time: 0.020 Function used was FASTA [36.3.4 Apr, 2011]