FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE5530, 430 aa 1>>>pF1KE5530 430 - 430 aa - 430 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.3961+/-0.000953; mu= 16.5701+/- 0.057 mean_var=63.2064+/-12.789, 0's: 0 Z-trim(103.6): 15 B-trim: 0 in 0/47 Lambda= 0.161322 statistics sampled from 7466 (7469) to 7466 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.602), E-opt: 0.2 (0.229), width: 16 Scan time: 2.800 The best scores are: opt bits E(32554) CCDS9391.1 LACC1 gene_id:144811|Hs108|chr13 ( 430) 2859 674.4 5.9e-194 >>CCDS9391.1 LACC1 gene_id:144811|Hs108|chr13 (430 aa) initn: 2859 init1: 2859 opt: 2859 Z-score: 3595.6 bits: 674.4 E(32554): 5.9e-194 Smith-Waterman score: 2859; 100.0% identity (100.0% similar) in 430 aa overlap (1-430:1-430) 10 20 30 40 50 60 pF1KE5 MAEAVLIDLFGLKLNSQKNCHQTLLKTLNAVQYHHAAKAKFLCIMCCSNISYERDGEQDN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS93 MAEAVLIDLFGLKLNSQKNCHQTLLKTLNAVQYHHAAKAKFLCIMCCSNISYERDGEQDN 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 CEIETSNGLSALLEEFEIVSCPSMAATLYTIKQKIDEKNLSSIKVIVPRHRKTLMKAFID :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS93 CEIETSNGLSALLEEFEIVSCPSMAATLYTIKQKIDEKNLSSIKVIVPRHRKTLMKAFID 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE5 QLFTDVYNFEFEDLQVTFRGGLFKQSIEINVITAQELRGIQNEIETFLRSLPALRGKLTI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS93 QLFTDVYNFEFEDLQVTFRGGLFKQSIEINVITAQELRGIQNEIETFLRSLPALRGKLTI 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE5 ITSSLIPDIFIHGFTTRTGGISYIPTLSSFNLFSSSKRRDPKVVVQENLRRLANAAGFNV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS93 ITSSLIPDIFIHGFTTRTGGISYIPTLSSFNLFSSSKRRDPKVVVQENLRRLANAAGFNV 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE5 EKFYRIKTHHSNDIWIMGRKEPDSYDGITTNQRGVTIAALGADCIPIVFADPVKKACGVA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS93 EKFYRIKTHHSNDIWIMGRKEPDSYDGITTNQRGVTIAALGADCIPIVFADPVKKACGVA 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE5 HAGWKGTLLGVAMATVNAMIAEYGCSLEDIVVVLGPSVGPCCFTLPRESAEAFHNLHPAC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS93 HAGWKGTLLGVAMATVNAMIAEYGCSLEDIVVVLGPSVGPCCFTLPRESAEAFHNLHPAC 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE5 VQLFDSPNPCIDIRKATRILLEQGGILPQNIQDQNQDLNLCTSCHPDKFFSHVRDGLNFG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS93 VQLFDSPNPCIDIRKATRILLEQGGILPQNIQDQNQDLNLCTSCHPDKFFSHVRDGLNFG 370 380 390 400 410 420 430 pF1KE5 TQIGFISIKE :::::::::: CCDS93 TQIGFISIKE 430 430 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 01:31:48 2016 done: Tue Nov 8 01:31:48 2016 Total Scan time: 2.800 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]