FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE5133, 166 aa 1>>>pF1KE5133 166 - 166 aa - 166 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.6923+/-0.000269; mu= 12.0027+/- 0.017 mean_var=91.7804+/-17.976, 0's: 0 Z-trim(120.7): 43 B-trim: 0 in 0/54 Lambda= 0.133875 statistics sampled from 36269 (36312) to 36269 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.79), E-opt: 0.2 (0.426), width: 16 Scan time: 5.960 The best scores are: opt bits E(85289) NP_689482 (OMIM: 613541,613559) probable peptide c ( 166) 1108 222.9 1.9e-58 XP_011537282 (OMIM: 613541,613559) PREDICTED: prob ( 166) 1108 222.9 1.9e-58 NP_001137377 (OMIM: 613541,613559) probable peptid ( 166) 1108 222.9 1.9e-58 XP_005253687 (OMIM: 613541,613559) PREDICTED: prob ( 166) 1108 222.9 1.9e-58 NP_001181924 (OMIM: 613541,613559) probable peptid ( 166) 1108 222.9 1.9e-58 XP_016876365 (OMIM: 604601) PREDICTED: peptide cha ( 281) 178 43.4 0.00033 XP_016876366 (OMIM: 604601) PREDICTED: peptide cha ( 281) 178 43.4 0.00033 XP_016876360 (OMIM: 604601) PREDICTED: peptide cha ( 444) 178 43.6 0.00047 XP_016876359 (OMIM: 604601) PREDICTED: peptide cha ( 444) 178 43.6 0.00047 XP_005266656 (OMIM: 604601) PREDICTED: peptide cha ( 445) 178 43.6 0.00047 XP_016876364 (OMIM: 604601) PREDICTED: peptide cha ( 445) 178 43.6 0.00047 XP_016876363 (OMIM: 604601) PREDICTED: peptide cha ( 445) 178 43.6 0.00047 XP_006719960 (OMIM: 604601) PREDICTED: peptide cha ( 445) 178 43.6 0.00047 XP_016876357 (OMIM: 604601) PREDICTED: peptide cha ( 445) 178 43.6 0.00047 XP_006719961 (OMIM: 604601) PREDICTED: peptide cha ( 445) 178 43.6 0.00047 XP_016876358 (OMIM: 604601) PREDICTED: peptide cha ( 445) 178 43.6 0.00047 NP_004285 (OMIM: 604601) peptide chain release fac ( 445) 178 43.6 0.00047 XP_016876352 (OMIM: 604601) PREDICTED: peptide cha ( 445) 178 43.6 0.00047 XP_011533627 (OMIM: 604601) PREDICTED: peptide cha ( 445) 178 43.6 0.00047 XP_011533623 (OMIM: 604601) PREDICTED: peptide cha ( 445) 178 43.6 0.00047 XP_016876362 (OMIM: 604601) PREDICTED: peptide cha ( 445) 178 43.6 0.00047 XP_011533622 (OMIM: 604601) PREDICTED: peptide cha ( 445) 178 43.6 0.00047 XP_016876351 (OMIM: 604601) PREDICTED: peptide cha ( 445) 178 43.6 0.00047 XP_006719963 (OMIM: 604601) PREDICTED: peptide cha ( 445) 178 43.6 0.00047 XP_016876355 (OMIM: 604601) PREDICTED: peptide cha ( 445) 178 43.6 0.00047 XP_011533620 (OMIM: 604601) PREDICTED: peptide cha ( 445) 178 43.6 0.00047 XP_016876354 (OMIM: 604601) PREDICTED: peptide cha ( 445) 178 43.6 0.00047 XP_016876356 (OMIM: 604601) PREDICTED: peptide cha ( 445) 178 43.6 0.00047 XP_011533625 (OMIM: 604601) PREDICTED: peptide cha ( 445) 178 43.6 0.00047 XP_016876353 (OMIM: 604601) PREDICTED: peptide cha ( 445) 178 43.6 0.00047 XP_016876350 (OMIM: 604601) PREDICTED: peptide cha ( 457) 178 43.6 0.00048 XP_011533619 (OMIM: 604601) PREDICTED: peptide cha ( 458) 178 43.6 0.00049 XP_016876349 (OMIM: 604601) PREDICTED: peptide cha ( 458) 178 43.6 0.00049 XP_016876348 (OMIM: 604601) PREDICTED: peptide cha ( 496) 178 43.6 0.00052 XP_016876347 (OMIM: 604601) PREDICTED: peptide cha ( 497) 178 43.6 0.00052 XP_016876345 (OMIM: 604601) PREDICTED: peptide cha ( 497) 178 43.6 0.00052 XP_011533617 (OMIM: 604601) PREDICTED: peptide cha ( 497) 178 43.6 0.00052 XP_016876346 (OMIM: 604601) PREDICTED: peptide cha ( 497) 178 43.6 0.00052 >>NP_689482 (OMIM: 613541,613559) probable peptide chain (166 aa) initn: 1108 init1: 1108 opt: 1108 Z-score: 1170.3 bits: 222.9 E(85289): 1.9e-58 Smith-Waterman score: 1108; 100.0% identity (100.0% similar) in 166 aa overlap (1-166:1-166) 10 20 30 40 50 60 pF1KE5 MSTVGLFHFPTPLTRICPAPWGLRLWEKLTLLSPGIAVTPVQMAGKKDYPALLSLDENEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_689 MSTVGLFHFPTPLTRICPAPWGLRLWEKLTLLSPGIAVTPVQMAGKKDYPALLSLDENEL 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 EEQFVKGHGPGGQATNKTSNCVVLKHIPSGIVVKCHQTRSVDQNRKLARKILQEKVDVFY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_689 EEQFVKGHGPGGQATNKTSNCVVLKHIPSGIVVKCHQTRSVDQNRKLARKILQEKVDVFY 70 80 90 100 110 120 130 140 150 160 pF1KE5 NGENSPVHKEKREAAKKKQERKKRAKETLEKKKLLKELWESSKKVH :::::::::::::::::::::::::::::::::::::::::::::: NP_689 NGENSPVHKEKREAAKKKQERKKRAKETLEKKKLLKELWESSKKVH 130 140 150 160 >>XP_011537282 (OMIM: 613541,613559) PREDICTED: probable (166 aa) initn: 1108 init1: 1108 opt: 1108 Z-score: 1170.3 bits: 222.9 E(85289): 1.9e-58 Smith-Waterman score: 1108; 100.0% identity (100.0% similar) in 166 aa overlap (1-166:1-166) 10 20 30 40 50 60 pF1KE5 MSTVGLFHFPTPLTRICPAPWGLRLWEKLTLLSPGIAVTPVQMAGKKDYPALLSLDENEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 MSTVGLFHFPTPLTRICPAPWGLRLWEKLTLLSPGIAVTPVQMAGKKDYPALLSLDENEL 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 EEQFVKGHGPGGQATNKTSNCVVLKHIPSGIVVKCHQTRSVDQNRKLARKILQEKVDVFY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 EEQFVKGHGPGGQATNKTSNCVVLKHIPSGIVVKCHQTRSVDQNRKLARKILQEKVDVFY 70 80 90 100 110 120 130 140 150 160 pF1KE5 NGENSPVHKEKREAAKKKQERKKRAKETLEKKKLLKELWESSKKVH :::::::::::::::::::::::::::::::::::::::::::::: XP_011 NGENSPVHKEKREAAKKKQERKKRAKETLEKKKLLKELWESSKKVH 130 140 150 160 >>NP_001137377 (OMIM: 613541,613559) probable peptide ch (166 aa) initn: 1108 init1: 1108 opt: 1108 Z-score: 1170.3 bits: 222.9 E(85289): 1.9e-58 Smith-Waterman score: 1108; 100.0% identity (100.0% similar) in 166 aa overlap (1-166:1-166) 10 20 30 40 50 60 pF1KE5 MSTVGLFHFPTPLTRICPAPWGLRLWEKLTLLSPGIAVTPVQMAGKKDYPALLSLDENEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MSTVGLFHFPTPLTRICPAPWGLRLWEKLTLLSPGIAVTPVQMAGKKDYPALLSLDENEL 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 EEQFVKGHGPGGQATNKTSNCVVLKHIPSGIVVKCHQTRSVDQNRKLARKILQEKVDVFY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 EEQFVKGHGPGGQATNKTSNCVVLKHIPSGIVVKCHQTRSVDQNRKLARKILQEKVDVFY 70 80 90 100 110 120 130 140 150 160 pF1KE5 NGENSPVHKEKREAAKKKQERKKRAKETLEKKKLLKELWESSKKVH :::::::::::::::::::::::::::::::::::::::::::::: NP_001 NGENSPVHKEKREAAKKKQERKKRAKETLEKKKLLKELWESSKKVH 130 140 150 160 >>XP_005253687 (OMIM: 613541,613559) PREDICTED: probable (166 aa) initn: 1108 init1: 1108 opt: 1108 Z-score: 1170.3 bits: 222.9 E(85289): 1.9e-58 Smith-Waterman score: 1108; 100.0% identity (100.0% similar) in 166 aa overlap (1-166:1-166) 10 20 30 40 50 60 pF1KE5 MSTVGLFHFPTPLTRICPAPWGLRLWEKLTLLSPGIAVTPVQMAGKKDYPALLSLDENEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 MSTVGLFHFPTPLTRICPAPWGLRLWEKLTLLSPGIAVTPVQMAGKKDYPALLSLDENEL 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 EEQFVKGHGPGGQATNKTSNCVVLKHIPSGIVVKCHQTRSVDQNRKLARKILQEKVDVFY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 EEQFVKGHGPGGQATNKTSNCVVLKHIPSGIVVKCHQTRSVDQNRKLARKILQEKVDVFY 70 80 90 100 110 120 130 140 150 160 pF1KE5 NGENSPVHKEKREAAKKKQERKKRAKETLEKKKLLKELWESSKKVH :::::::::::::::::::::::::::::::::::::::::::::: XP_005 NGENSPVHKEKREAAKKKQERKKRAKETLEKKKLLKELWESSKKVH 130 140 150 160 >>NP_001181924 (OMIM: 613541,613559) probable peptide ch (166 aa) initn: 1108 init1: 1108 opt: 1108 Z-score: 1170.3 bits: 222.9 E(85289): 1.9e-58 Smith-Waterman score: 1108; 100.0% identity (100.0% similar) in 166 aa overlap (1-166:1-166) 10 20 30 40 50 60 pF1KE5 MSTVGLFHFPTPLTRICPAPWGLRLWEKLTLLSPGIAVTPVQMAGKKDYPALLSLDENEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MSTVGLFHFPTPLTRICPAPWGLRLWEKLTLLSPGIAVTPVQMAGKKDYPALLSLDENEL 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 EEQFVKGHGPGGQATNKTSNCVVLKHIPSGIVVKCHQTRSVDQNRKLARKILQEKVDVFY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 EEQFVKGHGPGGQATNKTSNCVVLKHIPSGIVVKCHQTRSVDQNRKLARKILQEKVDVFY 70 80 90 100 110 120 130 140 150 160 pF1KE5 NGENSPVHKEKREAAKKKQERKKRAKETLEKKKLLKELWESSKKVH :::::::::::::::::::::::::::::::::::::::::::::: NP_001 NGENSPVHKEKREAAKKKQERKKRAKETLEKKKLLKELWESSKKVH 130 140 150 160 >>XP_016876365 (OMIM: 604601) PREDICTED: peptide chain r (281 aa) initn: 146 init1: 146 opt: 178 Z-score: 196.4 bits: 43.4 E(85289): 0.00033 Smith-Waterman score: 178; 30.8% identity (69.2% similar) in 107 aa overlap (53-157:129-229) 30 40 50 60 70 80 pF1KE5 LRLWEKLTLLSPGIAVTPVQMAGKKDYPALLSLDENELEEQFVKGHGPGGQATNKTSNCV ..:: ..:. . ...: ::: .:::.. : XP_016 IPEVGLSSRMQRIHTGTMSVIVLPQPDEVDVKLDPKDLRIDTFRAKGAGGQHVNKTDSAV 100 110 120 130 140 150 90 100 110 120 130 140 pF1KE5 VLKHIPSGIVVKCHQTRSVDQNRKLARKILQEKVDVFYNGENSPVHKEKRE--AAKKKQE : :::.:.::.:.: :: .:...: ..:. .. :. . ..:.::. .:.: : XP_016 RLVHIPTGLVVECQQERSQIKNKEIAFRVLRARL---YQ---QIIEKDKRQQQSARKLQV 160 170 180 190 200 210 150 160 pF1KE5 RKKRAKETLEKKKLLKELWESSKKVH . .: .. .. .. XP_016 GTRAQSERIRTYNFTQDRVSDHRIAYEVRDIKEFLCGGKGLDQLIQRLLQSADEEAIAEL 220 230 240 250 260 270 >>XP_016876366 (OMIM: 604601) PREDICTED: peptide chain r (281 aa) initn: 146 init1: 146 opt: 178 Z-score: 196.4 bits: 43.4 E(85289): 0.00033 Smith-Waterman score: 178; 30.8% identity (69.2% similar) in 107 aa overlap (53-157:129-229) 30 40 50 60 70 80 pF1KE5 LRLWEKLTLLSPGIAVTPVQMAGKKDYPALLSLDENELEEQFVKGHGPGGQATNKTSNCV ..:: ..:. . ...: ::: .:::.. : XP_016 IPEVGLSSRMQRIHTGTMSVIVLPQPDEVDVKLDPKDLRIDTFRAKGAGGQHVNKTDSAV 100 110 120 130 140 150 90 100 110 120 130 140 pF1KE5 VLKHIPSGIVVKCHQTRSVDQNRKLARKILQEKVDVFYNGENSPVHKEKRE--AAKKKQE : :::.:.::.:.: :: .:...: ..:. .. :. . ..:.::. .:.: : XP_016 RLVHIPTGLVVECQQERSQIKNKEIAFRVLRARL---YQ---QIIEKDKRQQQSARKLQV 160 170 180 190 200 210 150 160 pF1KE5 RKKRAKETLEKKKLLKELWESSKKVH . .: .. .. .. XP_016 GTRAQSERIRTYNFTQDRVSDHRIAYEVRDIKEFLCGGKGLDQLIQRLLQSADEEAIAEL 220 230 240 250 260 270 >>XP_016876360 (OMIM: 604601) PREDICTED: peptide chain r (444 aa) initn: 146 init1: 146 opt: 178 Z-score: 193.7 bits: 43.6 E(85289): 0.00047 Smith-Waterman score: 178; 30.8% identity (69.2% similar) in 107 aa overlap (53-157:293-393) 30 40 50 60 70 80 pF1KE5 LRLWEKLTLLSPGIAVTPVQMAGKKDYPALLSLDENELEEQFVKGHGPGGQATNKTSNCV ..:: ..:. . ...: ::: .:::.. : XP_016 IPEVGLSSRMQRIHTGTMSVIVLPQPDEVDVKLDPKDLRIDTFRAKGAGGQHVNKTDSAV 270 280 290 300 310 320 90 100 110 120 130 140 pF1KE5 VLKHIPSGIVVKCHQTRSVDQNRKLARKILQEKVDVFYNGENSPVHKEKRE--AAKKKQE : :::.:.::.:.: :: .:...: ..:. .. :. . ..:.::. .:.: : XP_016 RLVHIPTGLVVECQQERSQIKNKEIAFRVLRARL---YQ---QIIEKDKRQQQSARKLQV 330 340 350 360 370 150 160 pF1KE5 RKKRAKETLEKKKLLKELWESSKKVH . .: .. .. .. XP_016 GTRAQSERIRTYNFTQDRVSDHRIAYEVRDIKAQSHSTGGSRDPAHSTFLSLDSVRSPGI 380 390 400 410 420 430 >>XP_016876359 (OMIM: 604601) PREDICTED: peptide chain r (444 aa) initn: 146 init1: 146 opt: 178 Z-score: 193.7 bits: 43.6 E(85289): 0.00047 Smith-Waterman score: 178; 30.8% identity (69.2% similar) in 107 aa overlap (53-157:293-393) 30 40 50 60 70 80 pF1KE5 LRLWEKLTLLSPGIAVTPVQMAGKKDYPALLSLDENELEEQFVKGHGPGGQATNKTSNCV ..:: ..:. . ...: ::: .:::.. : XP_016 IPEVGLSSRMQRIHTGTMSVIVLPQPDEVDVKLDPKDLRIDTFRAKGAGGQHVNKTDSAV 270 280 290 300 310 320 90 100 110 120 130 140 pF1KE5 VLKHIPSGIVVKCHQTRSVDQNRKLARKILQEKVDVFYNGENSPVHKEKRE--AAKKKQE : :::.:.::.:.: :: .:...: ..:. .. :. . ..:.::. .:.: : XP_016 RLVHIPTGLVVECQQERSQIKNKEIAFRVLRARL---YQ---QIIEKDKRQQQSARKLQV 330 340 350 360 370 150 160 pF1KE5 RKKRAKETLEKKKLLKELWESSKKVH . .: .. .. .. XP_016 GTRAQSERIRTYNFTQDRVSDHRIAYEVRDIKAQSHSTGGSRDPAHSTFLSLDSVRSPGI 380 390 400 410 420 430 >>XP_005266656 (OMIM: 604601) PREDICTED: peptide chain r (445 aa) initn: 146 init1: 146 opt: 178 Z-score: 193.7 bits: 43.6 E(85289): 0.00047 Smith-Waterman score: 178; 30.8% identity (69.2% similar) in 107 aa overlap (53-157:293-393) 30 40 50 60 70 80 pF1KE5 LRLWEKLTLLSPGIAVTPVQMAGKKDYPALLSLDENELEEQFVKGHGPGGQATNKTSNCV ..:: ..:. . ...: ::: .:::.. : XP_005 IPEVGLSSRMQRIHTGTMSVIVLPQPDEVDVKLDPKDLRIDTFRAKGAGGQHVNKTDSAV 270 280 290 300 310 320 90 100 110 120 130 140 pF1KE5 VLKHIPSGIVVKCHQTRSVDQNRKLARKILQEKVDVFYNGENSPVHKEKRE--AAKKKQE : :::.:.::.:.: :: .:...: ..:. .. :. . ..:.::. .:.: : XP_005 RLVHIPTGLVVECQQERSQIKNKEIAFRVLRARL---YQ---QIIEKDKRQQQSARKLQV 330 340 350 360 370 150 160 pF1KE5 RKKRAKETLEKKKLLKELWESSKKVH . .: .. .. .. XP_005 GTRAQSERIRTYNFTQDRVSDHRIAYEVRDIKEFLCGGKGLDQLIQRLLQSADEEAIAEL 380 390 400 410 420 430 166 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 21:41:30 2016 done: Mon Nov 7 21:41:31 2016 Total Scan time: 5.960 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]