FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE5361, 304 aa 1>>>pF1KE5361 304 - 304 aa - 304 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.4570+/-0.000754; mu= 15.4822+/- 0.046 mean_var=73.5642+/-14.878, 0's: 0 Z-trim(108.7): 10 B-trim: 0 in 0/51 Lambda= 0.149534 statistics sampled from 10415 (10419) to 10415 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.683), E-opt: 0.2 (0.32), width: 16 Scan time: 2.020 The best scores are: opt bits E(32554) CCDS9149.1 PPTC7 gene_id:160760|Hs108|chr12 ( 304) 2041 449.2 1.8e-126 >>CCDS9149.1 PPTC7 gene_id:160760|Hs108|chr12 (304 aa) initn: 2041 init1: 2041 opt: 2041 Z-score: 2384.1 bits: 449.2 E(32554): 1.8e-126 Smith-Waterman score: 2041; 100.0% identity (100.0% similar) in 304 aa overlap (1-304:1-304) 10 20 30 40 50 60 pF1KE5 MFSVLSYGRLVARAVLGGLSQTDPRAGGGGGGDYGLVTAGCGFGKDFRKGLLKKGACYGD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS91 MFSVLSYGRLVARAVLGGLSQTDPRAGGGGGGDYGLVTAGCGFGKDFRKGLLKKGACYGD 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 DACFVARHRSADVLGVADGVGGWRDYGVDPSQFSGTLMRTCERLVKEGRFVPSNPIGILT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS91 DACFVARHRSADVLGVADGVGGWRDYGVDPSQFSGTLMRTCERLVKEGRFVPSNPIGILT 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE5 TSYCELLQNKVPLLGSSTACIVVLDRTSHRLHTANLGDSGFLVVRGGEVVHRSDEQQHYF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS91 TSYCELLQNKVPLLGSSTACIVVLDRTSHRLHTANLGDSGFLVVRGGEVVHRSDEQQHYF 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE5 NTPFQLSIAPPEAEGVVLSDSPDAADSTSFDVQLGDIILTATDGLFDNMPDYMILQELKK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS91 NTPFQLSIAPPEAEGVVLSDSPDAADSTSFDVQLGDIILTATDGLFDNMPDYMILQELKK 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE5 LKNSNYESIQQTARSIAEQAHELAYDPNYMSPFAQFACDNGLNVRGGKPDDITVLLSIVA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS91 LKNSNYESIQQTARSIAEQAHELAYDPNYMSPFAQFACDNGLNVRGGKPDDITVLLSIVA 250 260 270 280 290 300 pF1KE5 EYTD :::: CCDS91 EYTD 304 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 00:06:54 2016 done: Tue Nov 8 00:06:55 2016 Total Scan time: 2.020 Total Display time: -0.030 Function used was FASTA [36.3.4 Apr, 2011]